Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU0Hr1G014460.1 | |
| HORVU1Hr1G050960.7 | |
| HORVU5Hr1G124010.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G04060.1 | HORVU0Hr1G014460.1 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | HORVU1Hr1G050960.7 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | HORVU5Hr1G124010.1 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G100800.1 | Wheat | nucleus | 84.26 | 71.74 |
| TraesCS2A01G101200.1 | Wheat | nucleus | 83.83 | 71.38 |
| HORVU2Hr1G017360.1 | Barley | nucleus | 38.3 | 59.21 |
| CDY29982 | Canola | cytosol | 40.85 | 55.81 |
| GSMUA_Achr10P... | Banana | cytosol | 46.38 | 47.81 |
| GSMUA_Achr5P07600_001 | Banana | cytosol | 48.94 | 46.75 |
| Os07t0684800-01 | Rice | cytosol | 59.57 | 46.51 |
| HORVU2Hr1G017350.1 | Barley | nucleus | 76.6 | 45.34 |
| HORVU3Hr1G014090.1 | Barley | nucleus | 41.28 | 44.7 |
| HORVU2Hr1G017400.3 | Barley | nucleus | 72.77 | 44.65 |
| EER97754 | Sorghum | nucleus | 62.98 | 44.44 |
| Zm00001d022517_P001 | Maize | nucleus | 58.3 | 43.08 |
| HORVU2Hr1G017370.1 | Barley | cytosol, nucleus, plastid | 76.17 | 42.12 |
| GSMUA_Achr3P18020_001 | Banana | nucleus | 49.36 | 39.59 |
| HORVU4Hr1G051360.3 | Barley | nucleus | 57.45 | 39.02 |
| GSMUA_Achr9P16920_001 | Banana | cytosol | 48.94 | 37.58 |
| HORVU4Hr1G012030.1 | Barley | cytosol, mitochondrion, nucleus | 45.53 | 35.79 |
| GSMUA_Achr3P09520_001 | Banana | cytosol | 48.09 | 35.53 |
| GSMUA_Achr6P32290_001 | Banana | nucleus | 50.64 | 34.39 |
| GSMUA_Achr7P18330_001 | Banana | nucleus | 44.68 | 34.09 |
| AT5G18270.1 | Thale cress | nucleus | 48.09 | 33.73 |
| CDY53250 | Canola | nucleus | 48.09 | 33.63 |
| Bra023669.1-P | Field mustard | nucleus | 48.09 | 33.63 |
| CDY02636 | Canola | nucleus | 48.09 | 33.53 |
| GSMUA_Achr6P08600_001 | Banana | nucleus | 48.94 | 33.14 |
| AT3G04060.1 | Thale cress | nucleus | 47.66 | 33.14 |
| Bra002148.1-P | Field mustard | nucleus | 47.23 | 33.04 |
| CDX70804 | Canola | nucleus | 47.23 | 32.94 |
| CDY51238 | Canola | nucleus | 47.23 | 32.94 |
| Bra006449.1-P | Field mustard | nucleus | 46.81 | 32.74 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 46.81 | 32.07 |
| HORVU2Hr1G089210.4 | Barley | cytosol, mitochondrion, nucleus | 38.3 | 31.91 |
| Bra040153.1-P | Field mustard | nucleus | 46.38 | 31.78 |
| CDY42901 | Canola | nucleus | 46.38 | 31.69 |
| Bra031950.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 46.38 | 31.69 |
| HORVU2Hr1G103930.1 | Barley | mitochondrion | 38.72 | 30.85 |
| HORVU7Hr1G106480.1 | Barley | nucleus | 40.0 | 30.62 |
| HORVU7Hr1G031260.1 | Barley | nucleus | 44.68 | 29.66 |
| KRG94783 | Soybean | nucleus | 50.64 | 29.38 |
| KRH06738 | Soybean | nucleus | 50.21 | 28.99 |
| HORVU5Hr1G074810.1 | Barley | nucleus | 44.68 | 28.93 |
| VIT_08s0007g07640.t01 | Wine grape | nucleus | 48.51 | 28.29 |
| HORVU0Hr1G017490.7 | Barley | nucleus | 37.02 | 27.97 |
| KRH08479 | Soybean | nucleus | 48.51 | 27.8 |
| HORVU7Hr1G039700.1 | Barley | nucleus | 40.85 | 27.75 |
| HORVU4Hr1G089450.1 | Barley | cytosol, mitochondrion, nucleus, peroxisome | 41.28 | 27.71 |
| HORVU7Hr1G122680.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 43.4 | 27.57 |
| KRH70130 | Soybean | nucleus | 47.66 | 27.32 |
| HORVU3Hr1G014100.1 | Barley | cytosol, nucleus | 42.98 | 26.79 |
| HORVU7Hr1G072670.3 | Barley | cytosol, plastid | 38.72 | 26.69 |
| HORVU2Hr1G080460.8 | Barley | plastid | 45.53 | 26.16 |
| HORVU7Hr1G106660.9 | Barley | nucleus, plastid | 40.0 | 25.9 |
| HORVU7Hr1G082420.2 | Barley | nucleus | 39.15 | 23.47 |
| GSMUA_Achr8P21470_001 | Banana | nucleus | 50.21 | 22.87 |
| HORVU5Hr1G045640.7 | Barley | mitochondrion | 42.13 | 21.76 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:HORVU2Hr1G017380 |
| EnsemblPlants:HORVU2Hr1G017380.1 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:M0Y4W2 | InterPro:NAC-dom | InterPro:NAC_dom_sf |
| PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF47 | SUPFAM:SSF101941 | UniParc:UPI0002969D8F |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:41571285..41572514
Molecular Weight (calculated)
26291.1 Da
IEP (calculated)
5.736
GRAVY (calculated)
-0.520
Length
235 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDVTAVMGL RGEEPQLVLP RGFRFHPTDE EVVTYYLTPK ISNSYSSVLV VPDVNINNTE PWDLPSLAKM GEKEWFFFVH KDRKYPTGTR TNRATRSGYW
101: KATGKDKEIY RGKGRGAVLI GMKKTLVFYL GRAPSGEKTS WVMHEYRLEG QLPHRLPRSA KDDWAVCRLF NKDSAANNAP QMAPAADGGM EEEDPFAFLD
201: EIFNSDDLLN NADLPILMDS PSGAVDFAGA PAPQQ
101: KATGKDKEIY RGKGRGAVLI GMKKTLVFYL GRAPSGEKTS WVMHEYRLEG QLPHRLPRSA KDDWAVCRLF NKDSAANNAP QMAPAADGGM EEEDPFAFLD
201: EIFNSDDLLN NADLPILMDS PSGAVDFAGA PAPQQ
001: MVEEGGVVVN QGGDQEVVDL PPGFRFHPTD EEIITHYLKE KVFNIRFTAA AIGQADLNKN EPWDLPKIAK MGEKEFYFFC QRDRKYPTGM RTNRATVSGY
101: WKATGKDKEI FRGKGCLVGM KKTLVFYTGR APKGEKTNWV MHEYRLDGKY SYHNLPKTAR DEWVVCRVFH KNAPSTTITT TKQLSRIDSL DNIDHLLDFS
201: SLPPLIDPGF LGQPGPSFSG ARQQHDLKPV LHHPTTAPVD NTYLPTQALN FPYHSVHNSG SDFGYGAGSG NNNKGMIKLE HSLVSVSQET GLSSDVNTTA
301: TPEISSYPMM MNPAMMDGSK SACDGLDDLI FWEDLYTS
101: WKATGKDKEI FRGKGCLVGM KKTLVFYTGR APKGEKTNWV MHEYRLDGKY SYHNLPKTAR DEWVVCRVFH KNAPSTTITT TKQLSRIDSL DNIDHLLDFS
201: SLPPLIDPGF LGQPGPSFSG ARQQHDLKPV LHHPTTAPVD NTYLPTQALN FPYHSVHNSG SDFGYGAGSG NNNKGMIKLE HSLVSVSQET GLSSDVNTTA
301: TPEISSYPMM MNPAMMDGSK SACDGLDDLI FWEDLYTS
Arabidopsis Description
anac046NAC domain-containing protein 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SQQ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.