Factsheet for HORVU3Hr1G014100.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G014460.1
HORVU1Hr1G050960.7
HORVU5Hr1G124010.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G04060.1	HORVU0Hr1G014460.1	AT1G32230.1	19548978
AT3G04060.1	HORVU1Hr1G050960.7	AT1G32230.1	19548978
AT3G04060.1	HORVU5Hr1G124010.1	AT1G32230.1	19548978

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G092900.3	Wheat	nucleus	71.35	75.35
HORVU7Hr1G031260.1	Barley	nucleus	63.66	67.8
HORVU7Hr1G039700.1	Barley	nucleus	60.48	65.9
HORVU4Hr1G089450.1	Barley	cytosol, mitochondrion, nucleus, peroxisome	60.21	64.86
HORVU7Hr1G122680.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	55.17	56.22
CDY29982	Canola	cytosol	24.67	54.07
HORVU3Hr1G014090.1	Barley	nucleus	29.44	51.15
EES02626	Sorghum	cytosol	18.83	49.65
GSMUA_Achr10P...	Banana	cytosol	28.65	47.37
GSMUA_Achr5P07600_001	Banana	cytosol	29.97	45.94
HORVU2Hr1G017360.1	Barley	nucleus	17.77	44.08
HORVU2Hr1G017380.1	Barley	cytosol, nucleus, plastid	26.79	42.98
Os01t0104500-01	Rice	cytosol, mitochondrion, nucleus	35.01	41.25
GSMUA_Achr7P18330_001	Banana	nucleus	32.89	40.26
Os01t0393100-01	Rice	nucleus	33.95	39.02
HORVU4Hr1G012030.1	Barley	cytosol, mitochondrion, nucleus	29.71	37.46
GSMUA_Achr9P16920_001	Banana	cytosol	30.24	37.25
GSMUA_Achr3P18020_001	Banana	nucleus	28.38	36.52
GSMUA_Achr3P09520_001	Banana	cytosol	30.24	35.85
GSMUA_Achr6P08600_001	Banana	nucleus	32.89	35.73
GSMUA_Achr6P32290_001	Banana	nucleus	32.63	35.55
HORVU4Hr1G051360.3	Barley	nucleus	32.36	35.26
AT3G04060.1	Thale cress	nucleus	30.77	34.32
AT5G18270.1	Thale cress	nucleus	30.24	34.03
CDY02636	Canola	nucleus	30.24	33.83
Bra023669.1-P	Field mustard	nucleus	29.97	33.63
CDY53250	Canola	nucleus	29.97	33.63
CDX70804	Canola	nucleus	29.97	33.53
Bra006449.1-P	Field mustard	nucleus	29.71	33.33
CDY50879	Canola	cytoskeleton, cytosol, nucleus	30.24	33.24
CDY51238	Canola	nucleus	29.71	33.23
Bra031950.1-P	Field mustard	cytoskeleton, cytosol, nucleus	30.24	33.14
HORVU5Hr1G074810.1	Barley	nucleus	31.83	33.06
CDY42901	Canola	nucleus	29.97	32.85
Bra002148.1-P	Field mustard	nucleus	29.18	32.74
HORVU2Hr1G103930.1	Barley	mitochondrion	25.46	32.54
OQU89451	Sorghum	cytosol	32.1	32.53
Bra040153.1-P	Field mustard	nucleus	29.44	32.36
HORVU7Hr1G106480.1	Barley	nucleus	25.99	31.92
HORVU2Hr1G089210.4	Barley	cytosol, mitochondrion, nucleus	23.87	31.91
Zm00001d040189_P002	Maize	mitochondrion, nucleus, peroxisome	32.36	31.2
KRG94783	Soybean	nucleus	33.42	31.11
EES02651	Sorghum	nucleus	32.63	30.75
KXG28945	Sorghum	cytoskeleton, nucleus, peroxisome	29.97	30.46
EES17917	Sorghum	cytosol	32.36	30.35
VIT_08s0007g07640.t01	Wine grape	nucleus	32.1	30.02
KRH06738	Soybean	nucleus	32.1	29.73
Zm00001d008403_P001	Maize	plastid	25.2	29.5
HORVU0Hr1G017490.7	Barley	nucleus	24.14	29.26
HORVU2Hr1G017400.3	Barley	nucleus	29.44	28.98
KRH08479	Soybean	nucleus	31.03	28.54
HORVU7Hr1G072670.3	Barley	cytosol, plastid	25.73	28.45
HORVU2Hr1G080460.8	Barley	plastid	30.77	28.36
KRH70130	Soybean	nucleus	30.5	28.05
HORVU2Hr1G017350.1	Barley	nucleus	29.44	27.96
HORVU7Hr1G082420.2	Barley	nucleus	28.38	27.3
HORVU7Hr1G106660.9	Barley	nucleus, plastid	25.99	27.0
HORVU2Hr1G017370.1	Barley	cytosol, nucleus, plastid	29.44	26.12
HORVU5Hr1G045640.7	Barley	mitochondrion	30.24	25.05
GSMUA_Achr8P21470_001	Banana	nucleus	34.22	25.0

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	UniProt:A0A287K627	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:HORVU3Hr1G014100	EnsemblPlants:HORVU3Hr1G014100.1	InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf
PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31744	PANTHER:PTHR31744:SF23	SUPFAM:SSF101941	UniParc:UPI000B463227
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:32115291..32117947

Molecular Weight (calculated)

42570.4 Da

IEP (calculated)

6.229

GRAVY (calculated)

-0.419

Length

377 amino acids

Sequence
(BLAST)

001: PPPPTFCTPI GPIQRTSTME DYLQVQQQQE LHLPPGFRFH PTDVEIITSY LVPKVLKKPF DTRVVTEVDL NKHEPWELPN MAIMGEKEWY FFSEKDHKYP
101: TGIRTNRAMT TGYWKATGKD KEIFQPSTMS LIGMKKTLVF YMGTTPKGEK TNWIMHEYRL KSGKQPSPDV PSDITNATII NTSSKEDYVV CRIFHKSTGL
201: KKVVMSSYTM PMPMRVGAEH QHGFLESFTL PPLMDYNASS SLTPPLSLPA ASSYQLQATR PAALMMDDTL LPMMNGDYIG NHHHQMLVAP PQPLIPFYHH
301: HVEQQQHPMM QMQIMEMEMS ADQGFMVGIE PGSEPSSIVS QEDVMIGLKN NDLGNGSTAT PDEISSVNMG MDGMWVL

Best Arabidopsis Sequence Match ( AT2G24430.1 )
(BLAST)

001: MEQGDHQQHK KEEEALPPGF RFHPTDEELI SYYLVNKIAD QNFTGKAIAD VDLNKSEPWE LPEKAKMGGK EWYFFSLRDR KYPTGVRTNR ATNTGYWKTT
101: GKDKEIFNST TSELVGMKKT LVFYRGRAPR GEKTCWVMHE YRLHSKSSYR TSKQDEWVVC RVFKKTEATK KYISTSSSST SHHHNNHTRA SILSTNNNNP
201: NYSSDLLQLP PHLQPHPSLN INQSLMANAV HLAELSRVFR ASTSTTMDSS HQQLMNYTHM PVSGLNLNLG GALVQPPPVV SLEDVAAVSA SYNGENGFGN
301: VEMSQCMDLD GYWPSY

Arabidopsis Description

ANAC038NAC domain containing protein 38 [Source:UniProtKB/TrEMBL;Acc:Q9ZQ25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.