Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d012821_P003 | |
| Zm00001d014423_P002 | |
| Zm00001d030110_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G04060.1 | Zm00001d012821_P003 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | Zm00001d014423_P002 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | Zm00001d030110_P001 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d040189_P002 | Maize | mitochondrion, nucleus, peroxisome | 74.84 | 61.64 |
| EES02651 | Sorghum | nucleus | 68.01 | 54.75 |
| KXG28945 | Sorghum | cytoskeleton, nucleus, peroxisome | 60.87 | 52.83 |
| OQU89451 | Sorghum | cytosol | 56.52 | 48.92 |
| EES02626 | Sorghum | cytosol | 21.12 | 47.55 |
| CDY29982 | Canola | cytosol | 22.67 | 42.44 |
| GSMUA_Achr5P07600_001 | Banana | cytosol | 28.88 | 37.8 |
| TraesCS3B01G092800.1 | Wheat | cytosol | 24.22 | 36.62 |
| GSMUA_Achr10P... | Banana | cytosol | 25.47 | 35.96 |
| HORVU3Hr1G014090.1 | Barley | nucleus | 24.22 | 35.94 |
| TraesCS3A01G077900.1 | Wheat | nucleus | 23.6 | 35.51 |
| TraesCS3D01G078500.1 | Wheat | nucleus | 24.22 | 34.67 |
| Os01t0104500-01 | Rice | cytosol, mitochondrion, nucleus | 31.99 | 32.19 |
| GSMUA_Achr9P16920_001 | Banana | cytosol | 30.43 | 32.03 |
| TraesCS7D01G154200.1 | Wheat | nucleus | 35.09 | 31.74 |
| TraesCS7A01G152500.1 | Wheat | nucleus | 34.78 | 31.46 |
| TraesCS7B01G094000.1 | Wheat | nucleus | 26.4 | 31.14 |
| GSMUA_Achr6P08600_001 | Banana | nucleus | 33.54 | 31.12 |
| HORVU7Hr1G031260.1 | Barley | nucleus | 34.16 | 31.07 |
| Os01t0393100-01 | Rice | nucleus | 31.06 | 30.49 |
| GSMUA_Achr3P18020_001 | Banana | nucleus | 27.64 | 30.38 |
| TraesCS7B01G056300.1 | Wheat | nucleus | 33.54 | 30.25 |
| GSMUA_Achr3P09520_001 | Banana | cytosol | 29.81 | 30.19 |
| TraesCS7D01G196300.1 | Wheat | cytosol, nucleus, peroxisome | 32.61 | 30.09 |
| GSMUA_Achr7P18330_001 | Banana | nucleus | 28.57 | 29.87 |
| Bra002148.1-P | Field mustard | nucleus | 31.06 | 29.76 |
| CDX70804 | Canola | nucleus | 30.75 | 29.38 |
| TraesCS7A01G194700.1 | Wheat | nucleus | 31.68 | 29.23 |
| Bra006449.1-P | Field mustard | nucleus | 30.43 | 29.17 |
| HORVU4Hr1G089450.1 | Barley | cytosol, mitochondrion, nucleus, peroxisome | 31.68 | 29.14 |
| CDY51238 | Canola | nucleus | 30.43 | 29.08 |
| CDY02636 | Canola | nucleus | 30.43 | 29.08 |
| CDY53250 | Canola | nucleus | 30.12 | 28.87 |
| Bra023669.1-P | Field mustard | nucleus | 30.12 | 28.87 |
| TraesCS7B01G100300.1 | Wheat | nucleus | 28.88 | 28.79 |
| GSMUA_Achr6P32290_001 | Banana | nucleus | 30.75 | 28.61 |
| TraesCS7D01G543400.1 | Wheat | nucleus | 30.12 | 28.53 |
| TraesCS5A01G245900.2 | Wheat | nucleus | 28.88 | 28.35 |
| AT5G18270.1 | Thale cress | nucleus | 29.19 | 28.06 |
| TraesCS3B01G092900.3 | Wheat | nucleus | 31.06 | 28.01 |
| HORVU7Hr1G122680.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 31.99 | 27.84 |
| Zm00001d022517_P001 | Maize | nucleus | 27.33 | 27.67 |
| TraesCS7B01G489500.2 | Wheat | cytosol | 29.81 | 27.67 |
| Zm00001d024268_P001 | Maize | cytosol, nucleus, plastid | 24.22 | 27.66 |
| TraesCS7A01G569300.1 | Wheat | cytosol | 31.06 | 27.62 |
| Zm00001d033308_P001 | Maize | nucleus | 27.95 | 27.61 |
| Zm00001d047554_P001 | Maize | cytoskeleton, cytosol, nucleus | 29.81 | 27.59 |
| TraesCS7A01G189200.1 | Wheat | nucleus | 29.81 | 27.51 |
| HORVU7Hr1G039700.1 | Barley | nucleus | 29.5 | 27.46 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 29.19 | 27.41 |
| Zm00001d028995_P001 | Maize | cytosol | 29.81 | 27.35 |
| Bra031950.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 29.19 | 27.33 |
| CDY42901 | Canola | nucleus | 29.19 | 27.33 |
| Zm00001d013717_P001 | Maize | nucleus | 27.95 | 27.27 |
| TraesCS7D01G189900.1 | Wheat | nucleus | 27.33 | 27.24 |
| AT3G04060.1 | Thale cress | nucleus | 28.57 | 27.22 |
| Bra040153.1-P | Field mustard | nucleus | 28.88 | 27.11 |
| TraesCS7D01G543500.2 | Wheat | endoplasmic reticulum | 31.37 | 26.58 |
| Zm00001d051140_P001 | Maize | cytosol, mitochondrion, nucleus | 24.22 | 26.53 |
| Zm00001d050893_P001 | Maize | nucleus | 28.57 | 26.44 |
| Zm00001d005028_P001 | Maize | cytosol | 26.4 | 26.4 |
| TraesCS7A01G569100.1 | Wheat | nucleus | 31.06 | 26.32 |
| Zm00001d020982_P001 | Maize | cytosol, mitochondrion, nucleus | 30.43 | 26.06 |
| Zm00001d014405_P001 | Maize | nucleus | 24.53 | 25.9 |
| VIT_08s0007g07640.t01 | Wine grape | nucleus | 32.3 | 25.81 |
| Zm00001d006053_P001 | Maize | nucleus | 30.43 | 25.26 |
| Zm00001d035266_P001 | Maize | nucleus | 27.95 | 25.21 |
| HORVU3Hr1G014100.1 | Barley | cytosol, nucleus | 29.5 | 25.2 |
| TraesCS5B01G243300.1 | Wheat | nucleus | 20.81 | 25.0 |
| KRG94783 | Soybean | nucleus | 31.37 | 24.94 |
| Zm00001d016950_P002 | Maize | nucleus | 28.57 | 24.47 |
| Zm00001d052390_P001 | Maize | nucleus | 27.95 | 24.26 |
| Zm00001d025861_P001 | Maize | cytosol, nucleus, plastid | 22.05 | 24.23 |
| Zm00001d041791_P001 | Maize | nucleus | 27.33 | 23.91 |
| KRH06738 | Soybean | nucleus | 30.12 | 23.83 |
| Zm00001d003052_P001 | Maize | cytosol, mitochondrion, nucleus | 21.74 | 23.57 |
| Zm00001d003414_P002 | Maize | cytosol, mitochondrion, nucleus | 26.71 | 23.56 |
| KRH70130 | Soybean | nucleus | 29.81 | 23.41 |
| KRH08479 | Soybean | nucleus | 29.81 | 23.41 |
| Zm00001d051956_P001 | Maize | cytosol, mitochondrion, nucleus | 21.43 | 23.15 |
| Zm00001d002285_P001 | Maize | cytosol, nucleus, plastid | 22.36 | 22.71 |
| Zm00001d018435_P001 | Maize | cytosol, mitochondrion, nucleus | 20.81 | 22.64 |
| Zm00001d041472_P001 | Maize | cytosol, nucleus, peroxisome | 22.67 | 21.53 |
| GSMUA_Achr8P21470_001 | Banana | nucleus | 33.23 | 20.74 |
| Zm00001d031463_P002 | Maize | mitochondrion | 26.71 | 20.38 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | UniProt:A0A1D6FCJ5 | ProteinID:AQK89753.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 |
| PFscan:PS51005 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF23 | SUPFAM:SSF101941 | UniParc:UPI0008433D38 | EnsemblPlantsGene:Zm00001d008403 |
| EnsemblPlants:Zm00001d008403_P001 | EnsemblPlants:Zm00001d008403_T001 | SEG:seg | : | : | : |
Description
NAC-transcription factor 130Arabidopsis NAC domain containing protein 87
Coordinates
chr8:+:7619712..7621282
Molecular Weight (calculated)
34304.0 Da
IEP (calculated)
8.920
GRAVY (calculated)
-0.271
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MHAAIYAAYT CPRLVIDRDV DSIQSVGRMH DAGKAKMGEK EWYFFYQKDR KYPTGLRANR ATEAGYWKAT GKDKEVYNAA EGVAVLVGMK KTLVFYRGRA
101: PRGDKTNWVM HEYRLEGSGR LPAGLASATG SAAANAAAAL KASAYKQDEW VVCRVFHKTT GIKKTTAAPA YQVAMAGAEM DQNQNNFPGI PFPMPMQFPM
201: LPDFSLDPVP PYYPNAAGAG MSMLPMAAGI GGGAGGFQLN GAALFGNPMA APQPMSFYHQ MGAAGTACAG GFDVSAPESR PSSMVSQKDD QANGAEISSM
301: MSVAGPGPAT TTTIEMDGVW KY
101: PRGDKTNWVM HEYRLEGSGR LPAGLASATG SAAANAAAAL KASAYKQDEW VVCRVFHKTT GIKKTTAAPA YQVAMAGAEM DQNQNNFPGI PFPMPMQFPM
201: LPDFSLDPVP PYYPNAAGAG MSMLPMAAGI GGGAGGFQLN GAALFGNPMA APQPMSFYHQ MGAAGTACAG GFDVSAPESR PSSMVSQKDD QANGAEISSM
301: MSVAGPGPAT TTTIEMDGVW KY
001: MDLPPGFRFH PTDEELITHY LHKKVLDLGF SAKAIGEVDL NKAEPWELPY KAKIGEKEWY FFCVRDRKYP TGLRTNRATQ AGYWKATGKD KEIFRGKSLV
101: GMKKTLVFYR GRAPKGQKTN WVMHEYRLDG KLSAHNLPKT AKNEWVICRV FHKTAGGKKI PISTLIRIGS YGTGSSLPPL TDSSPYNDKT KTEPVYVPCF
201: SNQAETRGTI LNCFSNPSLS SIQPDFLQMI PLYQPQSLNI SESSNPVLTQ EQSVLQAMME NNRRQNFKTL SISQETGVSN TDNSSVFEFG RKRFDHQEVP
301: SPSSGPVDLE PFWNY
101: GMKKTLVFYR GRAPKGQKTN WVMHEYRLDG KLSAHNLPKT AKNEWVICRV FHKTAGGKKI PISTLIRIGS YGTGSSLPPL TDSSPYNDKT KTEPVYVPCF
201: SNQAETRGTI LNCFSNPSLS SIQPDFLQMI PLYQPQSLNI SESSNPVLTQ EQSVLQAMME NNRRQNFKTL SISQETGVSN TDNSSVFEFG RKRFDHQEVP
301: SPSSGPVDLE PFWNY
Arabidopsis Description
NAC079NAC4 [Source:UniProtKB/TrEMBL;Acc:A0A178UL34]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.