Factsheet for Os01t0104500-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0854800-03
Os10t0577800-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G04060.1	Os03t0854800-03	AT1G32230.1	19548978
AT3G04060.1	Os10t0577800-01	AT1G32230.1	19548978

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0393100-01	Rice	nucleus	88.12	85.98
CDY29982	Canola	cytosol	32.19	59.88
EES02626	Sorghum	cytosol	25.31	56.64
TraesCS3A01G077900.1	Wheat	nucleus	35.94	53.74
GSMUA_Achr10P...	Banana	cytosol	38.12	53.51
HORVU3Hr1G014090.1	Barley	nucleus	36.25	53.46
TraesCS3B01G092800.1	Wheat	cytosol	35.0	52.58
TraesCS3D01G078500.1	Wheat	nucleus	35.0	49.78
GSMUA_Achr5P07600_001	Banana	cytosol	37.5	48.78
GSMUA_Achr3P18020_001	Banana	nucleus	40.0	43.69
TraesCS7B01G094000.1	Wheat	nucleus	36.56	42.86
TraesCS7B01G056300.1	Wheat	nucleus	45.31	40.62
TraesCS7D01G154200.1	Wheat	nucleus	45.0	40.45
GSMUA_Achr7P18330_001	Banana	nucleus	38.75	40.26
TraesCS7A01G152500.1	Wheat	nucleus	44.69	40.17
TraesCS7D01G543400.1	Wheat	nucleus	42.5	40.0
TraesCS7D01G189900.1	Wheat	nucleus	40.0	39.63
HORVU7Hr1G031260.1	Barley	nucleus	43.75	39.55
Os07t0684800-01	Rice	cytosol	37.19	39.53
TraesCS7B01G100300.1	Wheat	nucleus	39.69	39.32
TraesCS7B01G489500.2	Wheat	cytosol	42.5	39.19
GSMUA_Achr9P16920_001	Banana	cytosol	37.19	38.89
GSMUA_Achr3P09520_001	Banana	cytosol	38.44	38.68
TraesCS7A01G569300.1	Wheat	cytosol	43.44	38.4
TraesCS3B01G092900.3	Wheat	nucleus	42.5	38.1
GSMUA_Achr6P08600_001	Banana	nucleus	41.25	38.04
CDY53250	Canola	nucleus	39.69	37.8
Bra023669.1-P	Field mustard	nucleus	39.69	37.8
HORVU7Hr1G122680.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	43.44	37.57
TraesCS7D01G196300.1	Wheat	cytosol, nucleus, peroxisome	40.94	37.54
CDY02636	Canola	nucleus	39.38	37.39
TraesCS5B01G243300.1	Wheat	nucleus	31.25	37.31
HORVU7Hr1G039700.1	Barley	nucleus	40.31	37.28
TraesCS7A01G189200.1	Wheat	nucleus	40.62	37.25
TraesCS7A01G194700.1	Wheat	nucleus	40.62	37.25
AT5G18270.1	Thale cress	nucleus	38.75	37.01
Os03t0624600-01	Rice	cytosol, mitochondrion, nucleus	37.19	36.84
TraesCS7D01G543500.2	Wheat	endoplasmic reticulum	43.75	36.84
Os04t0460600-02	Rice	cytosol, mitochondrion, nucleus	39.38	36.73
Bra006449.1-P	Field mustard	nucleus	38.44	36.61
CDY51238	Canola	nucleus	38.44	36.5
CDX70804	Canola	nucleus	38.44	36.5
TraesCS7A01G569100.1	Wheat	nucleus	43.12	36.32
TraesCS5A01G245900.2	Wheat	nucleus	37.19	36.28
AT3G04060.1	Thale cress	nucleus	38.12	36.09
Os09t0497900-01	Rice	cytosol	39.69	36.08
CDY42901	Canola	nucleus	38.75	36.05
Bra002148.1-P	Field mustard	nucleus	37.5	35.71
CDY50879	Canola	cytoskeleton, cytosol, nucleus	38.12	35.57
Os03t0327100-01	Rice	nucleus	39.38	35.2
Bra031950.1-P	Field mustard	cytoskeleton, cytosol, nucleus	37.81	35.17
HORVU4Hr1G089450.1	Barley	cytosol, mitochondrion, nucleus, peroxisome	38.44	35.14
HORVU3Hr1G014100.1	Barley	cytosol, nucleus	41.25	35.01
OQU89451	Sorghum	cytosol	40.62	34.95
Os02t0579000-01	Rice	mitochondrion	37.5	34.78
GSMUA_Achr6P32290_001	Banana	nucleus	37.5	34.68
Zm00001d040189_P002	Maize	mitochondrion, nucleus, peroxisome	41.88	34.27
Bra040153.1-P	Field mustard	nucleus	36.56	34.11
EES02651	Sorghum	nucleus	42.19	33.75
EES17917	Sorghum	cytosol	41.88	33.33
KXG28945	Sorghum	cytoskeleton, nucleus, peroxisome	38.44	33.15
Os06t0675600-01	Rice	nucleus	31.25	32.89
Os06t0344900-00	Rice	cytosol, nucleus, plastid	38.12	32.71
KRH06738	Soybean	nucleus	41.25	32.43
KRG94783	Soybean	nucleus	40.94	32.35
Zm00001d008403_P001	Maize	plastid	32.19	31.99
VIT_08s0007g07640.t01	Wine grape	nucleus	40.0	31.76
Os08t0200600-01	Rice	nucleus	29.06	31.74
Os08t0511200-00	Rice	cytosol	34.38	31.7
KRH08479	Soybean	nucleus	40.31	31.46
Os04t0515900-01	Rice	nucleus	27.19	31.3
Os12t0123800-01	Rice	nucleus	38.44	31.06
KRH70130	Soybean	nucleus	38.44	30.0
Os12t0610600-01	Rice	nucleus	30.62	29.43
Os03t0109000-01	Rice	nucleus	26.56	28.62
Os11t0127000-01	Rice	nucleus	24.69	26.78
Os10t0477600-01	Rice	nucleus	26.88	26.54
Os02t0810900-01	Rice	nucleus	27.19	26.28
GSMUA_Achr8P21470_001	Banana	nucleus	42.19	26.16

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EntrezGene:4326295	EMBL:AK242268	ProteinID:BAB16335.1	ProteinID:BAF03679.1
ProteinID:BAS69958.1	ProteinID:EAZ10206.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EMBL:GU120353
InterPro:IPR003441	InterPro:IPR036093	EMBL:JN944365	InterPro:NAC-dom	InterPro:NAC_dom_sf	EnsemblPlantsGene:Os01g0104500
EnsemblPlants:Os01t0104500-01	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31744	PANTHER:PTHR31744:SF23	UniProt:Q9FTY0
SUPFAM:SSF101941	UniParc:UPI00000A8F83	RefSeq:XP_015621005.1	SEG:seg	:	:

Description

NAC DOMAIN-CONTAINING PROTEIN 20No apical meristem (NAM) protein domain containing protein. (Os01t0104500-01)

Coordinates

chr1:+:241680..243440

Molecular Weight (calculated)

35728.5 Da

IEP (calculated)

6.713

GRAVY (calculated)

-0.573

Length

320 amino acids

Sequence
(BLAST)

001: MGEQQQQVER QPDLPPGFRF HPTDEEIITF YLAPKVVDSR GFCVAAIGEV DLNKCEPWDL PGKAKMNGEK EWYFYCQKDR KYPTGMRTNR ATEAGYWKAT
101: GKDKEIFRDH HMLIGMKKTL VFYKGRAPKG DKTNWVMHEY RLADASPPPP PSSAEPPRQD DWAVCRIFHK SSGIKKPVPV APHQVPAAAN YQQQQQMAMA
201: SAGIIQVPMQ MQMPSMSDQL QMLDDFSTTA SLSLMAPPSY STLPAGFPLQ INSGAHPQQF VGNPSMYYHQ QQQMDMAGGG FVVSEPSSLV VSPQDAADQN
301: NNAADISSMA CNMDAAIWKY

Best Arabidopsis Sequence Match ( AT5G07680.1 )
(BLAST)

001: METFGVFHKE DDEQMDLPPG FRFHPTDEEL ITHYLHKKVL DLGFSAKAIG EVDLNKAEPW ELPYKAKIGE KEWYFFCVRD RKYPTGLRTN RATQAGYWKA
101: TGKDKEIFRG KSLVGMKKTL VFYRGRAPKG QKTNWVMHEY RLDGKLSAHN LPKTAKNEWV ICRVFHKTAG GKKIPISTLI RIGSYGTGSS LPPLTDSSPY
201: NDKTKTEPVY VPCFSNQAET RGTILNCFSN PSLSSIQPDF LQMIPLYQPQ SLNISESSNP VLTQEQSVLQ AMMENNRRQN FKTLSISQET GVSNTDNSSV
301: FEFGRKRFDH QEVPSPSSGP VDLEPFWNY

Arabidopsis Description

NAC079NAC4 [Source:UniProtKB/TrEMBL;Acc:A0A178UL34]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.