Factsheet for Os04t0460600-02

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G343600.1	Wheat	nucleus	76.38	74.01
TraesCS2A01G338300.1	Wheat	nucleus	76.09	73.52
TraesCS2D01G324700.1	Wheat	nucleus	75.51	73.37
EES10946	Sorghum	cytosol, mitochondrion, nucleus	69.97	67.42
Zm00001d003414_P002	Maize	cytosol, mitochondrion, nucleus	67.35	63.29
HORVU2Hr1G080460.8	Barley	plastid	74.34	62.35
Os02t0579000-01	Rice	mitochondrion	57.43	57.1
Os07t0684800-01	Rice	cytosol	35.86	40.86
Os01t0104500-01	Rice	cytosol, mitochondrion, nucleus	36.73	39.38
Os06t0675600-01	Rice	nucleus	33.82	38.16
Os01t0393100-01	Rice	nucleus	36.15	37.8
Os04t0515900-01	Rice	nucleus	30.32	37.41
Os03t0327100-01	Rice	nucleus	38.78	37.15
Os08t0200600-01	Rice	nucleus	31.49	36.86
Os03t0624600-01	Rice	cytosol, mitochondrion, nucleus	34.69	36.84
Os09t0497900-01	Rice	cytosol	37.32	36.36
Os12t0610600-01	Rice	nucleus	34.4	35.44
Os06t0344900-00	Rice	cytosol, nucleus, plastid	36.73	33.78
Os08t0511200-00	Rice	cytosol	32.07	31.7
Os03t0109000-01	Rice	nucleus	26.82	30.98
Os02t0810900-01	Rice	nucleus	28.57	29.61
Os12t0123800-01	Rice	nucleus	34.11	29.55
Os10t0477600-01	Rice	nucleus	27.41	29.01
Os11t0127000-01	Rice	nucleus	21.87	25.42

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EntrezGene:4336052	EMBL:AK061745	EMBL:AK104626	ProteinID:BAF14906.1
ProteinID:BAS89546.1	ProteinID:CAD40985.2	EMBL:DQ520641	ProteinID:EEE61128.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	EnsemblPlantsGene:Os04g0460600
EnsemblPlants:Os04t0460600-02	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31744	PANTHER:PTHR31744:SF12	UniProt:Q7XUV6
SUPFAM:SSF101941	UniParc:UPI000021C606	RefSeq:XP_015633922.1	RefSeq:XP_015633924.1	SEG:seg	:

Description

NAC DOMAIN-CONTAINING PROTEIN 2Similar to H0219H12.10 protein. (Os04t0460600-01);NAC transcription factor, Regulation of shoot branching, plant height and flowering time (Os04t0460600-02)

Coordinates

chr4:+:22994562..22996601

Molecular Weight (calculated)

36840.7 Da

IEP (calculated)

7.644

GRAVY (calculated)

-0.295

Length

343 amino acids

Sequence
(BLAST)

001: MEQHQGQAGM DLPPGFRFHP TDEELITHYL AKKVADARFA ALAVAEADLN KCEPWDLPSL AKMGEKEWYF FCLKDRKYPT GLRTNRATES GYWKATGKDK
101: DIFRRKALVG MKKTLVFYTG RAPKGEKSGW VMHEYRLHGK LHAAALGFLH GKPASSKNEW VLCRVFKKSL VEVGAAGGKK AAVVTMEMAR GGSTSSSVAD
201: EIAMSSVVLP PLMDMSGAGA GAVDPATTAH VTCFSNALEG QFFNPTAVHG HGGGDSSPFM ASFTQYGQLH HGVSLVQLLE SCNGYGGLVD MAASGSQLQP
301: AACGGERERL SASQDTGLTS DVNPEISSSS GQKFDHEAAL WGY

Best Arabidopsis Sequence Match ( AT5G07680.2 )
(BLAST)

001: MDLPPGFRFH PTDEELITHY LHKKVLDLGF SAKAIGEVDL NKAEPWELPY KAKIGEKEWY FFCVRDRKYP TGLRTNRATQ AGYWKATGKD KEIFRGKSLV
101: GMKKTLVFYR GRAPKGQKTN WVMHEYRLDG KLSAHNLPKT AKNEWVICRV FHKTAGGKKI PISTLIRIGS YGTGSSLPPL TDSSPYNDKT KTEPVYVPCF
201: SNQAETRGTI LNCFSNPSLS SIQPDFLQMI PLYQPQSLNI SESSNPVLTQ EQSVLQAMME NNRRQNFKTL SISQETGVSN TDNSSVFEFG RKRFDHQEVP
301: SPSSGPVDLE PFWNY

Arabidopsis Description

NAC079NAC4 [Source:UniProtKB/TrEMBL;Acc:A0A178UL34]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.