Factsheet for Os03t0109000-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51707	Canola	cytosol	30.64	57.59
CDX92881	Canola	cytosol	29.97	54.6
Os04t0515900-01	Rice	nucleus	41.08	43.88
GSMUA_Achr5P18670_001	Banana	nucleus	39.39	42.86
GSMUA_Achr11P...	Banana	nucleus	37.71	42.75
GSMUA_AchrUn_...	Banana	nucleus	40.74	41.72
GSMUA_Achr8P18980_001	Banana	nucleus	38.05	41.39
GSMUA_Achr1P10860_001	Banana	nucleus	40.4	41.24
GSMUA_Achr1P20530_001	Banana	cytosol, nucleus, plastid	38.38	41.16
GSMUA_Achr6P36550_001	Banana	nucleus	38.05	40.65
GSMUA_Achr11P...	Banana	nucleus	37.37	39.93
GSMUA_AchrUn_...	Banana	nucleus	34.34	39.69
PGSC0003DMT400051915	Potato	cytosol	37.04	38.73
KRH67403	Soybean	cytosol, nucleus, plastid	38.38	38.51
KRH32193	Soybean	cytosol, nucleus, plastid	38.38	38.51
Solyc06g008360.2.1	Tomato	nucleus	36.36	38.3
Solyc09g025310.2.1	Tomato	nucleus	34.68	38.15
PGSC0003DMT400065559	Potato	nucleus	36.03	37.94
PGSC0003DMT400026644	Potato	cytosol, nucleus, peroxisome	35.35	37.91
KRG95684	Soybean	cytosol, nucleus, peroxisome	37.37	37.76
VIT_07s0005g03610.t01	Wine grape	mitochondrion, nucleus	29.63	35.92
Os10t0477600-01	Rice	nucleus	39.06	35.8
Os02t0810900-01	Rice	nucleus	39.73	35.65
CDY35197	Canola	nucleus	38.38	34.13
Os06t0675600-01	Rice	nucleus	34.34	33.55
CDY14236	Canola	cytosol	37.71	33.33
Bra011037.1-P	Field mustard	nucleus	38.38	33.14
Os08t0200600-01	Rice	nucleus	32.66	33.11
CDX97445	Canola	cytosol	37.37	33.04
CDY38380	Canola	nucleus	38.05	32.85
Bra010362.1-P	Field mustard	nucleus	38.05	32.56
Bra024194.1-P	Field mustard	nucleus	37.71	31.91
AT4G28530.1	Thale cress	nucleus	37.71	31.82
Os12t0610600-01	Rice	nucleus	34.01	30.33
Os07t0684800-01	Rice	cytosol	28.28	27.91
Os09t0497900-01	Rice	cytosol	31.99	26.99
Os03t0624600-01	Rice	cytosol, mitochondrion, nucleus	29.29	26.93
Os04t0460600-02	Rice	cytosol, mitochondrion, nucleus	30.98	26.82
Os02t0579000-01	Rice	mitochondrion	30.98	26.67
Os01t0104500-01	Rice	cytosol, mitochondrion, nucleus	28.62	26.56
Os01t0393100-01	Rice	nucleus	28.62	25.91
Os03t0327100-01	Rice	nucleus	30.64	25.42
Os08t0511200-00	Rice	cytosol	28.96	24.78
Os06t0344900-00	Rice	cytosol, nucleus, plastid	29.97	23.86
Os12t0123800-01	Rice	nucleus	29.63	22.22
Os11t0127000-01	Rice	nucleus	19.53	19.66
CDX92880	Canola	nucleus	9.76	14.65
CDY51708	Canola	nucleus	9.76	14.57

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EntrezGene:4331342	ProteinID:ABF93571.1	EMBL:AK070416	ProteinID:BAF10619.1
ProteinID:BAS81901.1	ProteinID:EAZ25307.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441
InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	EnsemblPlantsGene:Os03g0109000	EnsemblPlants:Os03t0109000-01	PFAM:PF02365
PFscan:PS51005	PANTHER:PTHR31744	PANTHER:PTHR31744:SF23	UniProt:Q10SW5	SUPFAM:SSF101941	UniParc:UPI0000DB40A8
RefSeq:XP_015629924.1	SEG:seg	:	:	:	:

Description

NAC DOMAIN-CONTAINING PROTEIN 55Similar to NAC domain protein. (Os03t0109000-01)

Coordinates

chr3:+:524008..525278

Molecular Weight (calculated)

34033.8 Da

IEP (calculated)

6.036

GRAVY (calculated)

-0.706

Length

297 amino acids

Sequence
(BLAST)

001: MDGLISDDSM MMGGEVRAIE SRLPPGFRFH PSDEELVGYY LRNKQQQQQQ QTAATSMLVE VDLHACEPWD LPEVAKVGSD EWYFFSWRER KYATGWRRNR
101: ASKQGYWKAT GKDKPILHPT VAGARKTLVF YSGRAPNGRK TAWVMHEFRL LHHHHHPNPN IQNMQQQEGD DWVLCRVFRK GNNSNGQPLA TSSPPAHHLV
201: ESLISSPAPT IMSDHDRLFT IQLPHHQHCD EQYFFLDDDE QHQQQLLDLS VLQAPTSFES EQAPGHGGME INIAEMESFD TTCAALQDAS DYCMQLY

Best Arabidopsis Sequence Match ( AT1G56010.2 )
(BLAST)

001: METEEEMKES SISMVEAKLP PGFRFHPKDD ELVCDYLMRR SLHNNHRPPL VLIQVDLNKC EPWDIPKMAC VGGKDWYFYS QRDRKYATGL RTNRATATGY
101: WKATGKDRTI LRKGKLVGMR KTLVFYQGRA PRGRKTDWVM HEFRLQGSHH PPNHSLSSPK EDWVLCRVFH KNTEGVICRD NMGSCFDETA SASLPPLMDP
201: YINFDQEPSS YLSDDHHYII NEHVPCFSNL SQNQTLNSNL TNSVSELKIP CKNPNPLFTG GSASATLTGL DSFCSSDQMV LRALLSQLTK IDGSLGPKES
301: QSYGEGSSES LLTDIGIPST VWNC

Arabidopsis Description

NAC021NAC domain-containing protein 21/22 [Source:UniProtKB/Swiss-Prot;Acc:Q84TE6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.