Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G071200.1 | Wheat | cytosol, mitochondrion, nucleus | 68.42 | 73.91 |
| TraesCS4A01G242700.1 | Wheat | cytosol, mitochondrion, nucleus | 68.42 | 73.91 |
| HORVU4Hr1G012030.1 | Barley | cytosol, mitochondrion, nucleus | 68.11 | 73.58 |
| TraesCS4B01G072400.1 | Wheat | cytosol, mitochondrion, nucleus | 67.8 | 73.24 |
| EER93792 | Sorghum | cytosol, mitochondrion, nucleus | 70.28 | 66.57 |
| Zm00001d013717_P001 | Maize | nucleus | 67.49 | 66.06 |
| Zm00001d033308_P001 | Maize | nucleus | 66.25 | 65.64 |
| CDY68680 | Canola | nucleus | 38.7 | 59.52 |
| CDY70041 | Canola | nucleus | 38.7 | 58.41 |
| GSMUA_Achr9P00570_001 | Banana | nucleus | 28.17 | 54.17 |
| GSMUA_Achr8P18420_001 | Banana | nucleus | 44.27 | 49.65 |
| CDX75966 | Canola | nucleus | 42.11 | 48.4 |
| VIT_17s0000g03660.t01 | Wine grape | nucleus | 46.75 | 46.18 |
| Bra037585.1-P | Field mustard | nucleus | 42.72 | 46.0 |
| Bra001705.1-P | Field mustard | nucleus | 42.41 | 45.82 |
| CDY51941 | Canola | nucleus | 42.41 | 45.82 |
| GSMUA_Achr10P... | Banana | nucleus | 46.44 | 45.73 |
| CDY18519 | Canola | nucleus | 42.72 | 45.7 |
| CDY69369 | Canola | nucleus | 42.72 | 45.39 |
| KRH48487 | Soybean | nucleus | 45.2 | 45.06 |
| KRH41635 | Soybean | nucleus | 43.34 | 44.73 |
| Bra022319.1-P | Field mustard | nucleus | 42.11 | 44.3 |
| CDY67593 | Canola | nucleus | 42.11 | 44.3 |
| KRH60340 | Soybean | nucleus | 43.96 | 44.24 |
| AT3G18400.1 | Thale cress | nucleus | 42.72 | 43.95 |
| PGSC0003DMT400013753 | Potato | nucleus | 45.2 | 43.58 |
| Solyc12g036480.1.1 | Tomato | nucleus | 43.96 | 43.56 |
| KRH39185 | Soybean | nucleus | 44.58 | 43.5 |
| PGSC0003DMT400074048 | Potato | nucleus | 39.63 | 41.97 |
| Os07t0684800-01 | Rice | cytosol | 38.08 | 40.86 |
| Os01t0104500-01 | Rice | cytosol, mitochondrion, nucleus | 36.84 | 37.19 |
| Os09t0497900-01 | Rice | cytosol | 40.25 | 36.93 |
| Os06t0344900-00 | Rice | cytosol, nucleus, plastid | 42.11 | 36.46 |
| Os01t0393100-01 | Rice | nucleus | 36.53 | 35.98 |
| Os04t0460600-02 | Rice | cytosol, mitochondrion, nucleus | 36.84 | 34.69 |
| Os04t0515900-01 | Rice | nucleus | 29.41 | 34.17 |
| Os08t0200600-01 | Rice | nucleus | 30.65 | 33.79 |
| Os02t0579000-01 | Rice | mitochondrion | 35.91 | 33.62 |
| Os03t0327100-01 | Rice | nucleus | 37.15 | 33.52 |
| Os06t0675600-01 | Rice | nucleus | 30.65 | 32.57 |
| Os08t0511200-00 | Rice | cytosol | 34.37 | 31.99 |
| Os12t0610600-01 | Rice | nucleus | 31.58 | 30.63 |
| Os10t0477600-01 | Rice | nucleus | 29.41 | 29.32 |
| Os03t0109000-01 | Rice | nucleus | 26.93 | 29.29 |
| Os12t0123800-01 | Rice | nucleus | 35.29 | 28.79 |
| Os02t0810900-01 | Rice | nucleus | 29.1 | 28.4 |
| Solyc06g069100.1.1 | Tomato | nucleus | 39.94 | 25.96 |
| Os11t0127000-01 | Rice | nucleus | 21.67 | 23.73 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EntrezGene:4333488 | ProteinID:AAR89042.1 | ProteinID:ABF97695.1 | EMBL:AK062675 |
| ProteinID:BAF12605.1 | ProteinID:BAS85332.1 | ProteinID:EAZ27830.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | EnsemblPlantsGene:Os03g0624600 | EnsemblPlants:Os03t0624600-01 |
| PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF43 | UniProt:Q75LG2 | SUPFAM:SSF101941 |
| UniParc:UPI0000232E97 | RefSeq:XP_015629240.1 | SEG:seg | : | : | : |
Description
NAC domain-containing protein 006, NAC domain-containing protein 6No apical meristem (NAM) protein domain containing protein. (Os03t0624600-01)
Coordinates
chr3:+:23734580..23736562
Molecular Weight (calculated)
34850.2 Da
IEP (calculated)
6.785
GRAVY (calculated)
-0.371
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEGLPPGFR FHPTDEELVT YYLARKVSDF GFATRAIADV DLNKCEPWDL PSKASMGEKE WYFFSMRDRK YPTGIRTNRA TDSGYWKTTG KDKEIFHGGA
101: LAGMKKTLVF YRGRAPKGAK TSWVMHEYRL QSKFPYKPAK DEWVVCRVFK KLQCHLAKPR PPHDDVDGDG ASPPEMVDAS SLGELGELDV SSILLGGFAP
201: PSGELCHGGG GGDGFGAHRL HVGAYMSWLQ AAAAANQGMF QWPAATQAGL VGGTVFAAAH KAAGTMPFGG GCSQQQARDV GVSLANVGGG DALFGGAPLA
301: KVDMECGEQA PQLDMDDSTW RAF
101: LAGMKKTLVF YRGRAPKGAK TSWVMHEYRL QSKFPYKPAK DEWVVCRVFK KLQCHLAKPR PPHDDVDGDG ASPPEMVDAS SLGELGELDV SSILLGGFAP
201: PSGELCHGGG GGDGFGAHRL HVGAYMSWLQ AAAAANQGMF QWPAATQAGL VGGTVFAAAH KAAGTMPFGG GCSQQQARDV GVSLANVGGG DALFGGAPLA
301: KVDMECGEQA PQLDMDDSTW RAF
001: MEENLPPGFR FHPTDEELIT HYLCRKVSDI GFTGKAVVDV DLNKCEPWDL PAKASMGEKE WYFFSQRDRK YPTGLRTNRA TEAGYWKTTG KDKEIYRSGV
101: LVGMKKTLVF YKGRAPKGEK SNWVMHEYRL ESKQPFNPTN KEEWVVCRVF EKSTAAKKAQ EQQPQSSQPS FGSPCDANSS MANEFEDIDE LPNLNSNSST
201: IDYNNHIHQY SQRNVYSEDN TTSTAGLNMN MNMASTNLQS WTTSLLGPPL SPINSLLLKA FQIRNSYSFP KEMIPSFNHS SLQQGVSNMI QNASSSSQVQ
301: PQPQEEAFNM DSIW
101: LVGMKKTLVF YKGRAPKGEK SNWVMHEYRL ESKQPFNPTN KEEWVVCRVF EKSTAAKKAQ EQQPQSSQPS FGSPCDANSS MANEFEDIDE LPNLNSNSST
201: IDYNNHIHQY SQRNVYSEDN TTSTAGLNMN MNMASTNLQS WTTSLLGPPL SPINSLLLKA FQIRNSYSFP KEMIPSFNHS SLQQGVSNMI QNASSSSQVQ
301: PQPQEEAFNM DSIW
Arabidopsis Description
anac058NAC domain containing protein 58 [Source:UniProtKB/TrEMBL;Acc:Q9LS50]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.