Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G071200.1 | Wheat | cytosol, mitochondrion, nucleus | 96.99 | 96.99 |
| TraesCS4A01G242700.1 | Wheat | cytosol, mitochondrion, nucleus | 96.66 | 96.66 |
| HORVU4Hr1G012030.1 | Barley | cytosol, mitochondrion, nucleus | 96.32 | 96.32 |
| EER93792 | Sorghum | cytosol, mitochondrion, nucleus | 77.93 | 68.33 |
| Os03t0624600-01 | Rice | cytosol, mitochondrion, nucleus | 73.24 | 67.8 |
| Zm00001d033308_P001 | Maize | nucleus | 73.91 | 67.79 |
| Zm00001d013717_P001 | Maize | nucleus | 73.91 | 66.97 |
| CDY68680 | Canola | nucleus | 44.15 | 62.86 |
| CDY70041 | Canola | nucleus | 44.48 | 62.15 |
| GSMUA_Achr9P00570_001 | Banana | nucleus | 30.77 | 54.76 |
| GSMUA_Achr8P18420_001 | Banana | nucleus | 48.83 | 50.69 |
| VIT_17s0000g03660.t01 | Wine grape | nucleus | 55.18 | 50.46 |
| CDX75966 | Canola | nucleus | 46.49 | 49.47 |
| GSMUA_Achr10P... | Banana | nucleus | 53.51 | 48.78 |
| KRH48487 | Soybean | nucleus | 52.51 | 48.46 |
| CDY18519 | Canola | nucleus | 48.83 | 48.34 |
| Bra037585.1-P | Field mustard | nucleus | 48.49 | 48.33 |
| Solyc12g036480.1.1 | Tomato | nucleus | 52.51 | 48.16 |
| PGSC0003DMT400013753 | Potato | nucleus | 53.85 | 48.06 |
| KRH60340 | Soybean | nucleus | 51.51 | 47.98 |
| CDY69369 | Canola | nucleus | 48.49 | 47.7 |
| Bra001705.1-P | Field mustard | nucleus | 47.49 | 47.49 |
| CDY51941 | Canola | nucleus | 47.49 | 47.49 |
| KRH41635 | Soybean | nucleus | 49.5 | 47.28 |
| CDY67593 | Canola | nucleus | 48.49 | 47.23 |
| Bra022319.1-P | Field mustard | nucleus | 48.49 | 47.23 |
| TraesCS3B01G092800.1 | Wheat | cytosol | 33.44 | 46.95 |
| KRH39185 | Soybean | nucleus | 51.51 | 46.53 |
| AT3G18400.1 | Thale cress | nucleus | 48.16 | 45.86 |
| PGSC0003DMT400074048 | Potato | nucleus | 45.82 | 44.92 |
| TraesCS6B01G416500.1 | Wheat | nucleus | 27.09 | 42.41 |
| TraesCS7B01G094000.1 | Wheat | nucleus | 35.12 | 38.46 |
| TraesCS5B01G275200.1 | Wheat | nucleus | 45.48 | 36.96 |
| TraesCS2B01G484100.1 | Wheat | cytosol, nucleus, plastid | 33.78 | 35.07 |
| TraesCS7B01G246300.1 | Wheat | nucleus | 41.81 | 34.53 |
| TraesCS7B01G143900.1 | Wheat | nucleus | 38.46 | 34.43 |
| TraesCS7B01G100300.1 | Wheat | nucleus | 36.79 | 34.06 |
| TraesCS7B01G489500.2 | Wheat | cytosol | 39.46 | 34.01 |
| TraesCS7B01G205600.1 | Wheat | cytosol | 33.11 | 33.9 |
| TraesCS4B01G174000.1 | Wheat | cytosol | 38.46 | 33.72 |
| TraesCS2B01G343600.1 | Wheat | nucleus | 39.8 | 33.62 |
| TraesCS7B01G365300.1 | Wheat | nucleus | 34.11 | 33.44 |
| TraesCS7B01G364600.1 | Wheat | nucleus | 34.11 | 33.22 |
| TraesCS2B01G118200.1 | Wheat | cytosol, nucleus, plastid | 38.8 | 33.05 |
| TraesCS2B01G118500.1 | Wheat | cytosol | 38.8 | 32.95 |
| TraesCS7B01G056300.1 | Wheat | nucleus | 39.13 | 32.77 |
| TraesCS5B01G054200.2 | Wheat | cytosol, nucleus, peroxisome | 32.78 | 31.92 |
| TraesCS2B01G118400.1 | Wheat | cytosol, nucleus, plastid | 37.46 | 31.91 |
| TraesCS6B01G416400.1 | Wheat | nucleus | 31.44 | 31.65 |
| TraesCS5B01G243300.1 | Wheat | nucleus | 27.76 | 30.97 |
| TraesCS3B01G092900.3 | Wheat | nucleus | 36.79 | 30.81 |
| TraesCS2B01G399700.1 | Wheat | cytosol, mitochondrion, nucleus | 31.44 | 30.62 |
| TraesCS6B01G416300.1 | Wheat | nucleus | 31.1 | 30.1 |
| TraesCS5B01G141900.1 | Wheat | nucleus | 37.79 | 28.18 |
| TraesCS2B01G118300.1 | Wheat | cytosol | 36.12 | 27.84 |
| Solyc06g069100.1.1 | Tomato | nucleus | 46.15 | 27.77 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31744 | PANTHER:PTHR31744:SF43 | SUPFAM:SSF101941 | EnsemblPlantsGene:TraesCS4B01G072400 | EnsemblPlants:TraesCS4B01G072400.1 | SEG:seg |
Description
No Description!
Coordinates
chr4B:+:67771418..67772922
Molecular Weight (calculated)
33339.6 Da
IEP (calculated)
7.219
GRAVY (calculated)
-0.480
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEGLPPGFR FHPTDEELIT YYLSRKVSDF SFVTRAIADV DLNKCEPWDL PSKASMGEKE WYFFSMRDRK YPTGIRTNRA TESGYWKTTG KDKEIFHAGR
101: LVGMKKTLVF YGGRAPKGEK TSWVMHEYRI QNKFPYKPNK EEWVVCRVFK KSQIVKMRHP QDSPDMDSPC NDGHASLGEL GEIDVSSMLG SFAPTGANAS
201: GDNFGHRIDM GAYMNWLAAA NQGAAAMLPW AAAAAPGLLG TVFSANPAMH KALAPFAGCS QLPRDVGGDA LFGNAMAKVD MECEQPPQLE MHESTWRTF
101: LVGMKKTLVF YGGRAPKGEK TSWVMHEYRI QNKFPYKPNK EEWVVCRVFK KSQIVKMRHP QDSPDMDSPC NDGHASLGEL GEIDVSSMLG SFAPTGANAS
201: GDNFGHRIDM GAYMNWLAAA NQGAAAMLPW AAAAAPGLLG TVFSANPAMH KALAPFAGCS QLPRDVGGDA LFGNAMAKVD MECEQPPQLE MHESTWRTF
001: MEENLPPGFR FHPTDEELIT HYLCRKVSDI GFTGKAVVDV DLNKCEPWDL PAKASMGEKE WYFFSQRDRK YPTGLRTNRA TEAGYWKTTG KDKEIYRSGV
101: LVGMKKTLVF YKGRAPKGEK SNWVMHEYRL ESKQPFNPTN KEEWVVCRVF EKSTAAKKAQ EQQPQSSQPS FGSPCDANSS MANEFEDIDE LPNLNSNSST
201: IDYNNHIHQY SQRNVYSEDN TTSTAGLNMN MNMASTNLQS WTTSLLGPPL SPINSLLLKA FQIRNSYSFP KEMIPSFNHS SLQQGVSNMI QNASSSSQVQ
301: PQPQEEAFNM DSIW
101: LVGMKKTLVF YKGRAPKGEK SNWVMHEYRL ESKQPFNPTN KEEWVVCRVF EKSTAAKKAQ EQQPQSSQPS FGSPCDANSS MANEFEDIDE LPNLNSNSST
201: IDYNNHIHQY SQRNVYSEDN TTSTAGLNMN MNMASTNLQS WTTSLLGPPL SPINSLLLKA FQIRNSYSFP KEMIPSFNHS SLQQGVSNMI QNASSSSQVQ
301: PQPQEEAFNM DSIW
Arabidopsis Description
anac058NAC domain containing protein 58 [Source:UniProtKB/TrEMBL;Acc:Q9LS50]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.