Factsheet for GSMUA_Achr8P18420_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68680	Canola	nucleus	46.18	63.33
CDY70041	Canola	nucleus	46.88	63.08
GSMUA_Achr9P00570_001	Banana	nucleus	32.29	55.36
GSMUA_Achr6P01770_001	Banana	cytosol, mitochondrion, nucleus	42.71	53.25
CDX75966	Canola	nucleus	50.0	51.25
Bra022319.1-P	Field mustard	nucleus	53.82	50.49
VIT_17s0000g03660.t01	Wine grape	nucleus	57.29	50.46
Bra037585.1-P	Field mustard	nucleus	52.08	50.0
CDY18519	Canola	nucleus	52.08	49.67
CDY67593	Canola	nucleus	52.78	49.51
CDY51941	Canola	nucleus	51.39	49.5
Bra001705.1-P	Field mustard	nucleus	51.39	49.5
CDY69369	Canola	nucleus	52.08	49.34
TraesCS4D01G071200.1	Wheat	cytosol, mitochondrion, nucleus	51.04	49.16
Solyc12g036480.1.1	Tomato	nucleus	55.56	49.08
TraesCS4B01G072400.1	Wheat	cytosol, mitochondrion, nucleus	50.69	48.83
TraesCS4A01G242700.1	Wheat	cytosol, mitochondrion, nucleus	50.69	48.83
HORVU4Hr1G012030.1	Barley	cytosol, mitochondrion, nucleus	50.69	48.83
GSMUA_Achr10P...	Banana	cytosol	38.54	48.68
GSMUA_Achr10P...	Banana	nucleus	55.21	48.48
KRH48487	Soybean	nucleus	54.51	48.46
AT3G18400.1	Thale cress	nucleus	52.43	48.09
KRH41635	Soybean	nucleus	51.74	47.6
KRH60340	Soybean	nucleus	52.78	47.35
GSMUA_Achr5P07600_001	Banana	cytosol	40.28	47.15
KRH39185	Soybean	nucleus	54.17	47.13
PGSC0003DMT400013753	Potato	nucleus	54.17	46.57
Zm00001d033308_P001	Maize	nucleus	51.39	45.4
Zm00001d013717_P001	Maize	nucleus	51.04	44.55
Os03t0624600-01	Rice	cytosol, mitochondrion, nucleus	49.65	44.27
EER93792	Sorghum	cytosol, mitochondrion, nucleus	51.39	43.4
PGSC0003DMT400074048	Potato	nucleus	45.83	43.28
GSMUA_Achr7P19680_001	Banana	cytosol, mitochondrion, nucleus	46.88	41.28
GSMUA_Achr3P18020_001	Banana	nucleus	40.28	39.59
GSMUA_Achr8P24680_001	Banana	cytosol	43.4	39.43
GSMUA_Achr9P16920_001	Banana	cytosol	41.32	38.89
GSMUA_Achr7P18330_001	Banana	nucleus	41.32	38.64
GSMUA_Achr10P...	Banana	nucleus	43.4	37.65
GSMUA_Achr9P10210_001	Banana	nucleus	30.9	36.93
GSMUA_Achr10P...	Banana	cytosol	45.49	36.9
GSMUA_Achr3P23360_001	Banana	nucleus	35.76	36.79
GSMUA_Achr9P27530_001	Banana	nucleus	41.67	36.14
GSMUA_Achr6P30570_001	Banana	cytosol, nucleus, plastid	40.62	36.0
GSMUA_Achr11P...	Banana	nucleus	34.72	35.84
GSMUA_Achr5P00500_001	Banana	nucleus	33.68	35.4
GSMUA_Achr9P20090_001	Banana	cytosol	38.89	35.33
GSMUA_Achr3P09520_001	Banana	cytosol	38.89	35.22
GSMUA_Achr11P...	Banana	nucleus	31.6	34.73
GSMUA_Achr6P32290_001	Banana	nucleus	41.32	34.39
GSMUA_Achr6P08600_001	Banana	nucleus	41.32	34.29
GSMUA_Achr6P30050_001	Banana	nucleus	33.68	34.04
GSMUA_Achr5P26640_001	Banana	nucleus	35.07	33.78
GSMUA_Achr5P18670_001	Banana	nucleus	31.94	33.7
GSMUA_Achr8P33310_001	Banana	nucleus	32.64	33.22
GSMUA_AchrUn_...	Banana	nucleus	29.51	33.07
GSMUA_Achr6P31350_001	Banana	nucleus	33.68	32.55
GSMUA_Achr9P26140_001	Banana	cytosol	35.42	32.38
GSMUA_Achr8P18980_001	Banana	nucleus	30.21	31.87
GSMUA_Achr7P11500_001	Banana	nucleus	37.15	31.47
GSMUA_Achr8P07120_001	Banana	nucleus	32.64	31.23
GSMUA_Achr6P36550_001	Banana	nucleus	29.86	30.94
GSMUA_Achr1P20530_001	Banana	cytosol, nucleus, plastid	29.51	30.69
GSMUA_Achr11P...	Banana	nucleus	29.51	30.58
GSMUA_AchrUn_...	Banana	nucleus	30.56	30.34
GSMUA_Achr1P10860_001	Banana	nucleus	29.17	28.87
Solyc06g069100.1.1	Tomato	nucleus	45.49	26.36
GSMUA_Achr8P21470_001	Banana	nucleus	43.06	24.03

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr8G18420_001
EnsemblPlants:GSMUA_Achr8P18420_001	EnsemblPlants:GSMUA_Achr8T18420_001	InterPro:IPR003441	InterPro:IPR036093	UniProt:M0TRJ5	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31744	PANTHER:PTHR31744:SF3	SUPFAM:SSF101941
UniParc:UPI000296FAFA	:	:	:	:	:

Description

NAC domain protein, IPR003441 [Source:GMGC_GENE;Acc:GSMUA_Achr8G18420_001]

Coordinates

chr8:-:22559600..22560647

Molecular Weight (calculated)

32048.0 Da

IEP (calculated)

8.797

GRAVY (calculated)

-0.534

Length

288 amino acids

Sequence
(BLAST)

001: MQESLPPGFR FHPTDEELIT YYLSRKVTEL GFATAAIADV DLNRCEPWDL PGKASMGQKE WYFFNLKDRK YPTGLRTNRA TDAGYWKTTG KDKEILHREV
101: LVGMKKTLVF YKGRAPKGEK TGWVMHEYRL HTGFPYNGTK EEWVVCRVFK KSSAGKKPQP DSPALLESPC ELAGLINGVQ TNESMYHSNS MLDVNMYMNW
201: VLAPWASGSL GAGFAPTQAI LRALQSYGHK QPEGMETASL SSLVGQGDAM LGSGSRLSFP ASSSTRADCA AGQQQMQSFD QGSNWRGY

Best Arabidopsis Sequence Match ( AT3G18400.1 )
(BLAST)

001: MEENLPPGFR FHPTDEELIT HYLCRKVSDI GFTGKAVVDV DLNKCEPWDL PAKASMGEKE WYFFSQRDRK YPTGLRTNRA TEAGYWKTTG KDKEIYRSGV
101: LVGMKKTLVF YKGRAPKGEK SNWVMHEYRL ESKQPFNPTN KEEWVVCRVF EKSTAAKKAQ EQQPQSSQPS FGSPCDANSS MANEFEDIDE LPNLNSNSST
201: IDYNNHIHQY SQRNVYSEDN TTSTAGLNMN MNMASTNLQS WTTSLLGPPL SPINSLLLKA FQIRNSYSFP KEMIPSFNHS SLQQGVSNMI QNASSSSQVQ
301: PQPQEEAFNM DSIW

Arabidopsis Description

anac058NAC domain containing protein 58 [Source:UniProtKB/TrEMBL;Acc:Q9LS50]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.