Factsheet for GSMUA_Achr6P30050_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P31350_001	Banana	nucleus	70.88	67.79
GSMUA_Achr9P26140_001	Banana	cytosol	74.39	67.3
GSMUA_Achr9P10210_001	Banana	nucleus	56.49	66.81
GSMUA_Achr5P00500_001	Banana	nucleus	52.63	54.74
GSMUA_Achr3P23360_001	Banana	nucleus	52.98	53.93
GSMUA_Achr5P26640_001	Banana	nucleus	56.49	53.85
GSMUA_Achr11P...	Banana	nucleus	52.63	53.76
GSMUA_Achr8P33310_001	Banana	nucleus	52.28	52.65
TraesCS5D01G059700.2	Wheat	cytosol, nucleus, peroxisome	54.04	50.83
TraesCS5A01G049100.2	Wheat	cytosol, nucleus, peroxisome	54.39	50.65
TraesCS5B01G054200.2	Wheat	cytosol, nucleus, peroxisome	54.04	50.16
KRH13649	Soybean	nucleus	52.63	49.51
CDY51910	Canola	nucleus	43.16	49.2
Os12t0610600-01	Rice	nucleus	56.49	48.35
KRH43817	Soybean	nucleus	50.88	48.01
GSMUA_Achr8P07120_001	Banana	nucleus	50.53	47.84
CDX82566	Canola	nucleus	46.32	47.65
Bra001480.1-P	Field mustard	nucleus	45.96	47.29
CDY23558	Canola	nucleus	45.26	47.08
AT3G12977.1	Thale cress	nucleus	45.61	46.59
Bra034713.1-P	Field mustard	nucleus	44.91	46.55
GSMUA_Achr9P00570_001	Banana	nucleus	27.37	46.43
OQU79579	Sorghum	cytosol, nucleus, peroxisome	54.39	46.41
CDY60115	Canola	nucleus	45.26	46.24
VIT_19s0027g00230.t01	Wine grape	nucleus	45.96	44.41
Zm00001d041472_P001	Maize	cytosol, nucleus, peroxisome	52.28	43.95
Bra030820.1-P	Field mustard	nucleus	48.77	43.3
CDY42401	Canola	nucleus	48.77	43.3
AT1G56010.2	Thale cress	nucleus	48.42	42.59
CDY10515	Canola	nucleus	48.07	42.55
GSMUA_Achr10P...	Banana	cytosol	32.63	40.79
Solyc07g066330.2.1	Tomato	nucleus	48.77	40.64
GSMUA_Achr5P07600_001	Banana	cytosol	34.39	39.84
PGSC0003DMT400056916	Potato	nucleus	48.77	39.83
GSMUA_Achr6P36550_001	Banana	nucleus	37.54	38.49
GSMUA_Achr5P18670_001	Banana	nucleus	36.84	38.46
KXG28193	Sorghum	cytosol	37.54	38.21
GSMUA_Achr11P...	Banana	nucleus	35.09	38.17
GSMUA_Achr6P01770_001	Banana	cytosol, mitochondrion, nucleus	30.88	38.1
GSMUA_Achr11P...	Banana	nucleus	36.49	37.41
GSMUA_Achr8P18980_001	Banana	nucleus	35.79	37.36
GSMUA_AchrUn_...	Banana	nucleus	37.89	37.24
GSMUA_AchrUn_...	Banana	nucleus	32.98	36.58
GSMUA_Achr1P20530_001	Banana	cytosol, nucleus, plastid	35.09	36.1
GSMUA_Achr1P10860_001	Banana	nucleus	36.84	36.08
GSMUA_Achr8P18420_001	Banana	nucleus	34.04	33.68
GSMUA_Achr3P18020_001	Banana	nucleus	33.68	32.76
GSMUA_Achr9P27530_001	Banana	nucleus	37.54	32.23
GSMUA_Achr7P11500_001	Banana	nucleus	37.89	31.76
GSMUA_Achr9P16920_001	Banana	cytosol	34.04	31.7
GSMUA_Achr9P20090_001	Banana	cytosol	34.74	31.23
GSMUA_Achr7P18330_001	Banana	nucleus	33.68	31.17
GSMUA_Achr3P09520_001	Banana	cytosol	34.74	31.13
GSMUA_Achr6P30570_001	Banana	cytosol, nucleus, plastid	35.44	31.08
GSMUA_Achr10P...	Banana	cytosol	37.54	30.14
GSMUA_Achr10P...	Banana	nucleus	34.39	29.88
GSMUA_Achr6P32290_001	Banana	nucleus	35.79	29.48
GSMUA_Achr6P08600_001	Banana	nucleus	35.79	29.39
GSMUA_Achr8P24680_001	Banana	cytosol	32.63	29.34
GSMUA_Achr10P...	Banana	nucleus	33.68	28.92
GSMUA_Achr7P19680_001	Banana	cytosol, mitochondrion, nucleus	32.28	28.13
GSMUA_Achr8P21470_001	Banana	nucleus	38.95	21.51

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr6G30050_001
EnsemblPlants:GSMUA_Achr6P30050_001	EnsemblPlants:GSMUA_Achr6T30050_001	InterPro:IPR003441	InterPro:IPR036093	UniProt:M0TBF0	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31744	PANTHER:PTHR31744:SF5	SUPFAM:SSF101941
UniParc:UPI000294AA1F	:	:	:	:	:

Description

Putative NAC domain-containing protein 21/22 [Source:GMGC_GENE;Acc:GSMUA_Achr6G30050_001]

Coordinates

chr6:-:30158615..30160526

Molecular Weight (calculated)

31596.5 Da

IEP (calculated)

7.657

GRAVY (calculated)

-0.511

Length

285 amino acids

Sequence
(BLAST)

001: MLSMVEAKLP PGFRFQPRDD ELICDYLAAK VGGRSFHGRP AMVDVDLNKC EPWDLPDTAS VGGKEWYFFS LRDRKYATGQ RTNRATMSGY WKATGKDRSV
101: TRKGLLVGTR KTLVFYQGRA PKGRKTDWVM HEYRMEGSAA TPTFPFKEDW VLCRVCCKSR GISTDASMET SLDDSSPQSL PVVMGNHISS GQTPVNLEGS
201: EQVTCFSNTT QSHTSQCPNL DPWLPAMERG IPLTRCLPSL NPVLYQRTKL EGDPEGEVVP SLAEGSLDGC LSQSGLPSTR NPFLD

Best Arabidopsis Sequence Match ( AT1G56010.2 )
(BLAST)

001: METEEEMKES SISMVEAKLP PGFRFHPKDD ELVCDYLMRR SLHNNHRPPL VLIQVDLNKC EPWDIPKMAC VGGKDWYFYS QRDRKYATGL RTNRATATGY
101: WKATGKDRTI LRKGKLVGMR KTLVFYQGRA PRGRKTDWVM HEFRLQGSHH PPNHSLSSPK EDWVLCRVFH KNTEGVICRD NMGSCFDETA SASLPPLMDP
201: YINFDQEPSS YLSDDHHYII NEHVPCFSNL SQNQTLNSNL TNSVSELKIP CKNPNPLFTG GSASATLTGL DSFCSSDQMV LRALLSQLTK IDGSLGPKES
301: QSYGEGSSES LLTDIGIPST VWNC

Arabidopsis Description

NAC021NAC domain-containing protein 21/22 [Source:UniProtKB/Swiss-Prot;Acc:Q84TE6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.