Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY60115 | Canola | nucleus | 91.97 | 90.32 |
| CDX82566 | Canola | nucleus | 83.94 | 83.03 |
| CDY51910 | Canola | nucleus | 74.82 | 82.0 |
| AT3G12977.1 | Thale cress | nucleus | 78.1 | 76.7 |
| CDY42401 | Canola | nucleus | 70.07 | 59.81 |
| CDY10515 | Canola | nucleus | 68.98 | 58.7 |
| CDY51707 | Canola | cytosol | 31.39 | 54.43 |
| KRH43817 | Soybean | nucleus | 59.49 | 53.97 |
| KRH13649 | Soybean | nucleus | 58.39 | 52.81 |
| CDX92881 | Canola | cytosol | 30.66 | 51.53 |
| VIT_19s0027g00230.t01 | Wine grape | nucleus | 53.28 | 49.49 |
| CDY29982 | Canola | cytosol | 30.29 | 48.26 |
| GSMUA_Achr9P10210_001 | Banana | nucleus | 42.34 | 48.13 |
| GSMUA_Achr6P30050_001 | Banana | nucleus | 47.08 | 45.26 |
| Solyc07g066330.2.1 | Tomato | nucleus | 55.11 | 44.15 |
| Os06t0675600-01 | Rice | nucleus | 48.91 | 44.08 |
| GSMUA_Achr6P31350_001 | Banana | nucleus | 47.81 | 43.96 |
| GSMUA_Achr3P23360_001 | Banana | nucleus | 44.89 | 43.93 |
| TraesCS7A01G464100.1 | Wheat | nucleus | 48.91 | 43.65 |
| TraesCS7B01G365300.1 | Wheat | nucleus | 48.54 | 43.61 |
| GSMUA_Achr5P00500_001 | Banana | nucleus | 43.43 | 43.43 |
| GSMUA_Achr8P33310_001 | Banana | nucleus | 44.53 | 43.11 |
| GSMUA_Achr11P... | Banana | nucleus | 43.8 | 43.01 |
| HORVU7Hr1G106480.1 | Barley | nucleus | 48.18 | 43.0 |
| PGSC0003DMT400056916 | Potato | nucleus | 54.74 | 42.98 |
| TraesCS7A01G464800.1 | Wheat | nucleus | 48.18 | 42.86 |
| TraesCS7D01G452500.1 | Wheat | nucleus | 48.18 | 42.86 |
| EER88807 | Sorghum | nucleus | 47.81 | 42.67 |
| TraesCS7B01G364600.1 | Wheat | nucleus | 47.81 | 42.67 |
| TraesCS7D01G451700.1 | Wheat | nucleus | 48.54 | 42.63 |
| CDY68680 | Canola | nucleus | 32.48 | 42.38 |
| Zm00001d014405_P001 | Maize | nucleus | 47.08 | 42.3 |
| GSMUA_Achr5P26640_001 | Banana | nucleus | 45.99 | 42.14 |
| CDY70041 | Canola | nucleus | 32.48 | 41.59 |
| TraesCS5D01G059700.2 | Wheat | cytosol, nucleus, peroxisome | 45.99 | 41.58 |
| TraesCS2B01G484100.1 | Wheat | cytosol, nucleus, plastid | 43.43 | 41.32 |
| Os08t0200600-01 | Rice | nucleus | 44.16 | 41.3 |
| TraesCS7D01G302000.1 | Wheat | cytosol | 43.8 | 41.24 |
| TraesCS5A01G049100.2 | Wheat | cytosol, nucleus, peroxisome | 45.99 | 41.18 |
| TraesCS7A01G305200.1 | Wheat | cytosol | 43.43 | 41.18 |
| TraesCS5B01G054200.2 | Wheat | cytosol, nucleus, peroxisome | 45.99 | 41.04 |
| GSMUA_Achr8P07120_001 | Banana | nucleus | 44.89 | 40.86 |
| TraesCS7B01G205600.1 | Wheat | cytosol | 43.43 | 40.75 |
| Zm00001d024268_P001 | Maize | cytosol, nucleus, plastid | 41.61 | 40.43 |
| GSMUA_Achr9P26140_001 | Banana | cytosol | 46.35 | 40.32 |
| EES13494 | Sorghum | cytosol, nucleus, plastid | 41.97 | 39.79 |
| TraesCS2D01G462900.1 | Wheat | cytosol, nucleus, plastid | 40.88 | 38.36 |
| CDY66026 | Canola | cytoskeleton, cytosol, nucleus | 36.13 | 38.22 |
| HORVU2Hr1G103930.1 | Barley | mitochondrion | 40.88 | 37.97 |
| Os12t0610600-01 | Rice | nucleus | 45.99 | 37.84 |
| CDY64672 | Canola | nucleus | 37.59 | 36.4 |
| OQU79579 | Sorghum | cytosol, nucleus, peroxisome | 44.16 | 36.23 |
| CDY69936 | Canola | nucleus | 37.23 | 36.04 |
| OQU82346 | Sorghum | cytosol, nucleus, plastid | 40.51 | 35.92 |
| HORVU7Hr1G106660.9 | Barley | nucleus, plastid | 47.45 | 35.81 |
| HORVU7Hr1G072670.3 | Barley | cytosol, plastid | 44.53 | 35.78 |
| Zm00001d041472_P001 | Maize | cytosol, nucleus, peroxisome | 44.16 | 35.69 |
| Zm00001d002285_P001 | Maize | cytosol, nucleus, plastid | 40.51 | 35.02 |
| CDX67433 | Canola | nucleus | 36.5 | 34.72 |
| CDY37008 | Canola | nucleus | 36.5 | 34.72 |
| TraesCS2A01G462500.1 | Wheat | plastid | 41.61 | 34.03 |
| CDX74442 | Canola | nucleus | 35.4 | 33.56 |
| CDY30258 | Canola | nucleus | 35.4 | 33.56 |
| CDY14030 | Canola | nucleus | 38.32 | 33.33 |
| CDY40775 | Canola | nucleus | 38.69 | 32.72 |
| CDX75966 | Canola | nucleus | 33.21 | 32.38 |
| CDX82444 | Canola | nucleus | 36.13 | 32.04 |
| CDY42875 | Canola | nucleus | 37.96 | 32.0 |
| CDX75813 | Canola | nucleus | 35.77 | 31.82 |
| CDY56940 | Canola | nucleus | 37.96 | 31.8 |
| CDY20103 | Canola | nucleus | 35.04 | 31.68 |
| CDY69369 | Canola | nucleus | 34.67 | 31.25 |
| CDY18519 | Canola | nucleus | 34.31 | 31.13 |
| CDY51941 | Canola | nucleus | 33.94 | 31.1 |
| CDY32316 | Canola | nucleus | 34.67 | 30.94 |
| CDX85242 | Canola | cytosol | 36.13 | 30.84 |
| CDY67593 | Canola | nucleus | 34.31 | 30.62 |
| CDY35197 | Canola | nucleus | 37.23 | 30.54 |
| CDX86391 | Canola | cytoskeleton, cytosol, nucleus | 34.31 | 30.42 |
| CDY38380 | Canola | nucleus | 37.23 | 29.65 |
| KXG28193 | Sorghum | cytosol | 29.93 | 29.29 |
| CDX97445 | Canola | cytosol | 35.77 | 29.17 |
| CDY14236 | Canola | cytosol | 35.77 | 29.17 |
| CDY20411 | Canola | cytosol | 33.94 | 28.97 |
| CDY53250 | Canola | nucleus | 35.4 | 28.87 |
| CDY02636 | Canola | nucleus | 35.4 | 28.78 |
| CDY45986 | Canola | cytosol | 33.58 | 28.75 |
| CDY20314 | Canola | nucleus | 32.85 | 28.39 |
| CDX76817 | Canola | nucleus | 32.48 | 28.08 |
| CDY34773 | Canola | nucleus | 32.48 | 28.08 |
| CDX70804 | Canola | nucleus | 34.31 | 27.89 |
| CDY51238 | Canola | nucleus | 34.31 | 27.89 |
| CDX98529 | Canola | mitochondrion | 27.74 | 27.84 |
| CDX99695 | Canola | mitochondrion | 27.74 | 27.84 |
| CDX87602 | Canola | cytosol | 33.94 | 27.76 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 34.67 | 27.7 |
| CDX88273 | Canola | cytosol | 33.94 | 27.6 |
| CDY42901 | Canola | nucleus | 33.94 | 27.03 |
| CDY20001 | Canola | cytoskeleton, cytosol, nucleus | 35.77 | 26.34 |
| CDX96262 | Canola | nucleus | 35.04 | 26.16 |
| CDY28805 | Canola | nucleus | 35.04 | 26.16 |
| CDY51708 | Canola | nucleus | 7.3 | 10.05 |
| CDX92880 | Canola | nucleus | 6.93 | 9.6 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078GG52 | UniProt:A0A078GG52 | EnsemblPlants:CDY23558 | ProteinID:CDY23558 |
| ProteinID:CDY23558.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00023746001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 |
| PANTHER:PTHR31744:SF5 | SUPFAM:SSF101941 | UniParc:UPI0004EAB5CE | SEG:seg | : | : |
Description
BnaC05g40360DBnaC05g40360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GG52]
Coordinates
chrLK032145:+:48022..50180
Molecular Weight (calculated)
31619.5 Da
IEP (calculated)
9.256
GRAVY (calculated)
-0.794
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAEEENKGS ISMVEAKLPP GFRFHPRDDE LVCDYLMKRN VRSRYQPVVL IEVDLNKCEP WDIPQSARVG GKEWYFYSQK DRKYATGQRT NRATAIGYWK
101: ATGKDRAIQR NGSLVGMRKT LVFYIGRAPK GRKTDWVMHE FRLQGTFIHH SPKEEWVLCR AFNKNNNEVD KDNNMRTCSH ETAPPLMDSY INFNPHHIIN
201: QQVPCFSNLS QNQIGLVYKN PNLLSTNPSS DQMVLKALLR QLTKNTKESQ SYGEGSSESQ LTDVGIPSHD AWKY
101: ATGKDRAIQR NGSLVGMRKT LVFYIGRAPK GRKTDWVMHE FRLQGTFIHH SPKEEWVLCR AFNKNNNEVD KDNNMRTCSH ETAPPLMDSY INFNPHHIIN
201: QQVPCFSNLS QNQIGLVYKN PNLLSTNPSS DQMVLKALLR QLTKNTKESQ SYGEGSSESQ LTDVGIPSHD AWKY
001: MEETEKNKGS ISMVEANLPP GFRFHPRDDE LVCDYLMRRT VRSLYQPVVL IDVDLNKCEP WDIPQTARVG GKEWYFYSQK DRKYATGYRT NRATATGYWK
101: ATGKDRAIQR NGGLVGMRKT LVFYRGRSPK GRKTDWVMHE FRLQGKLLHH SPNSLEEEWV LCRVFHKNSN GADIDDITRS CSDATASAFM DSYINFDHHH
201: IINQHVPCFS NNLSHNQTNQ SGLISKNSSP LFNASPDQMI LRTLLSQLTK KVEESQSRGD GSSESQLTDI GIPSHAWNY
101: ATGKDRAIQR NGGLVGMRKT LVFYRGRSPK GRKTDWVMHE FRLQGKLLHH SPNSLEEEWV LCRVFHKNSN GADIDDITRS CSDATASAFM DSYINFDHHH
201: IINQHVPCFS NNLSHNQTNQ SGLISKNSSP LFNASPDQMI LRTLLSQLTK KVEESQSRGD GSSESQLTDI GIPSHAWNY
Arabidopsis Description
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LSI1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.