Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012960.1-P | Field mustard | nucleus | 98.17 | 98.17 |
| AT5G61430.1 | Thale cress | nucleus | 93.58 | 91.07 |
| CDY42875 | Canola | nucleus | 86.24 | 86.77 |
| CDY69936 | Canola | nucleus | 67.28 | 77.74 |
| CDY64672 | Canola | nucleus | 66.97 | 77.39 |
| CDY14030 | Canola | nucleus | 73.7 | 76.51 |
| CDY40775 | Canola | nucleus | 74.01 | 74.69 |
| CDY29982 | Canola | cytosol | 34.86 | 66.28 |
| KRH56898 | Soybean | nucleus | 63.3 | 59.14 |
| VIT_17s0000g06400.t01 | Wine grape | nucleus | 64.83 | 58.89 |
| KRH03497 | Soybean | nucleus | 62.69 | 58.57 |
| CDY68680 | Canola | nucleus | 37.0 | 57.62 |
| CDY66026 | Canola | cytoskeleton, cytosol, nucleus | 45.26 | 57.14 |
| CDY70041 | Canola | nucleus | 37.0 | 56.54 |
| CDX67433 | Canola | nucleus | 48.93 | 55.56 |
| CDY37008 | Canola | nucleus | 48.62 | 55.21 |
| CDY51707 | Canola | cytosol | 26.3 | 54.43 |
| CDY30258 | Canola | nucleus | 48.01 | 54.33 |
| CDX74442 | Canola | nucleus | 47.71 | 53.98 |
| CDX92881 | Canola | cytosol | 26.3 | 52.76 |
| CDX85242 | Canola | cytosol | 48.93 | 49.84 |
| CDX86391 | Canola | cytoskeleton, cytosol, nucleus | 47.09 | 49.84 |
| CDY51238 | Canola | nucleus | 45.87 | 44.51 |
| CDX70804 | Canola | nucleus | 45.87 | 44.51 |
| CDX75966 | Canola | nucleus | 38.23 | 44.48 |
| CDY53250 | Canola | nucleus | 45.57 | 44.35 |
| CDX75813 | Canola | nucleus | 41.59 | 44.16 |
| CDY20001 | Canola | cytoskeleton, cytosol, nucleus | 50.15 | 44.09 |
| CDX82444 | Canola | nucleus | 41.59 | 44.01 |
| CDY02636 | Canola | nucleus | 45.26 | 43.92 |
| CDY18519 | Canola | nucleus | 40.06 | 43.38 |
| CDY20103 | Canola | nucleus | 40.06 | 43.23 |
| CDY32316 | Canola | nucleus | 40.37 | 43.0 |
| CDY51941 | Canola | nucleus | 39.14 | 42.81 |
| CDY69369 | Canola | nucleus | 39.76 | 42.76 |
| CDY20314 | Canola | nucleus | 41.28 | 42.59 |
| CDX76817 | Canola | nucleus | 41.28 | 42.59 |
| CDY67593 | Canola | nucleus | 39.76 | 42.35 |
| CDY34773 | Canola | nucleus | 40.98 | 42.27 |
| CDY51910 | Canola | nucleus | 32.11 | 42.0 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 44.04 | 41.98 |
| CDY42901 | Canola | nucleus | 43.73 | 41.57 |
| CDY60115 | Canola | nucleus | 33.64 | 39.43 |
| CDX82566 | Canola | nucleus | 33.03 | 38.99 |
| CDX99695 | Canola | mitochondrion | 31.8 | 38.1 |
| CDX98529 | Canola | mitochondrion | 31.8 | 38.1 |
| CDY20411 | Canola | cytosol | 37.31 | 38.01 |
| CDY23558 | Canola | nucleus | 31.8 | 37.96 |
| CDX96262 | Canola | nucleus | 42.51 | 37.87 |
| CDY45986 | Canola | cytosol | 37.0 | 37.81 |
| CDY28805 | Canola | nucleus | 42.2 | 37.6 |
| CDX87602 | Canola | cytosol | 37.31 | 36.42 |
| CDX88273 | Canola | cytosol | 37.31 | 36.2 |
| CDY42401 | Canola | nucleus | 33.33 | 33.96 |
| CDY10515 | Canola | nucleus | 33.33 | 33.85 |
| CDY35197 | Canola | nucleus | 30.58 | 29.94 |
| CDY38380 | Canola | nucleus | 30.89 | 29.36 |
| CDX97445 | Canola | cytosol | 29.97 | 29.17 |
| CDY14236 | Canola | cytosol | 29.97 | 29.17 |
| CDY51708 | Canola | nucleus | 6.12 | 10.05 |
| CDX92880 | Canola | nucleus | 5.81 | 9.6 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078J3N4 | UniProt:A0A078J3N4 | EnsemblPlants:CDY56940 | ProteinID:CDY56940 |
| ProteinID:CDY56940.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00020292001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 |
| PANTHER:PTHR31744:SF7 | SUPFAM:SSF101941 | UniParc:UPI0004EEDAE1 | : | : | : |
Description
BnaC07g49940DBnaC07g49940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J3N4]
Coordinates
chrLK033533:+:34081..35494
Molecular Weight (calculated)
37253.2 Da
IEP (calculated)
8.441
GRAVY (calculated)
-0.667
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MERFCGFQKE EEQMDLPPGF RFHPTDEELI SHYLHKKVLD ISFSAKAIGE VDLNKSEPWE LPWMAKMGEK EWYFFCVRDR KYPTGLRTNR ATEAGYWKAT
101: GKDKEIYRGK SLVGMKKTLV FYRGRAPKGQ KTNWVMHEYR LEGKLSAHNL PKTAKNEWVI CRVFQKSAGG KKIPISSLIR IGSLGTDFSP SLMPSLTDAS
201: PFNDKTKTEP VYVPCFSNQT DQAQGNPLNC FSSPDIFHRI PLYQTQSLQV SGDLQSPILG QEHSVLHAMI DNNRRQSLKG MSVSQETAVS TDMNTDISSD
301: FEYGKRRAQE DPSSSAGPVD LEPFWNY
101: GKDKEIYRGK SLVGMKKTLV FYRGRAPKGQ KTNWVMHEYR LEGKLSAHNL PKTAKNEWVI CRVFQKSAGG KKIPISSLIR IGSLGTDFSP SLMPSLTDAS
201: PFNDKTKTEP VYVPCFSNQT DQAQGNPLNC FSSPDIFHRI PLYQTQSLQV SGDLQSPILG QEHSVLHAMI DNNRRQSLKG MSVSQETAVS TDMNTDISSD
301: FEYGKRRAQE DPSSSAGPVD LEPFWNY
001: METFCGFQKE EEQMDLPPGF RFHPTDEELI THYLHKKVLD TSFSAKAIGE VDLNKSEPWE LPWMAKMGEK EWYFFCVRDR KYPTGLRTNR ATEAGYWKAT
101: GKDKEIYRGK SLVGMKKTLV FYRGRAPKGQ KTNWVMHEYR LEGKFSAHNL PKTAKNEWVI CRVFQKSAGG KKIPISSLIR IGSLGTDFNP SLLPSLTDSS
201: PYNDKTKTEP VYVPCFSNQT DQNQGTTLNC FSSPVLNSIQ ADIFHRIPLY QTQSLQVSMN LQSPVLTQEH SVLHAMIENN RRQSLKTMSV SQETGVSTDM
301: NTDISSDFEF GKRRFDSQED PSSSTGPVDL EPFWNY
101: GKDKEIYRGK SLVGMKKTLV FYRGRAPKGQ KTNWVMHEYR LEGKFSAHNL PKTAKNEWVI CRVFQKSAGG KKIPISSLIR IGSLGTDFNP SLLPSLTDSS
201: PYNDKTKTEP VYVPCFSNQT DQNQGTTLNC FSSPVLNSIQ ADIFHRIPLY QTQSLQVSMN LQSPVLTQEH SVLHAMIENN RRQSLKTMSV SQETGVSTDM
301: NTDISSDFEF GKRRFDSQED PSSSTGPVDL EPFWNY
Arabidopsis Description
NAC100NAC domain-containing protein 100 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLJ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.