Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015750.1-P | Field mustard | cytosol | 97.92 | 98.51 |
| CDX87602 | Canola | cytosol | 97.92 | 98.51 |
| CDY45986 | Canola | cytosol | 85.76 | 90.31 |
| CDY20411 | Canola | cytosol | 85.76 | 90.03 |
| AT1G76420.1 | Thale cress | cytosol | 83.38 | 84.13 |
| CDY29982 | Canola | cytosol | 27.89 | 54.65 |
| CDY68680 | Canola | nucleus | 33.53 | 53.81 |
| CDY70041 | Canola | nucleus | 33.53 | 52.8 |
| CDY51707 | Canola | cytosol | 24.04 | 51.27 |
| CDX92881 | Canola | cytosol | 24.04 | 49.69 |
| CDY66026 | Canola | cytoskeleton, cytosol, nucleus | 35.31 | 45.95 |
| KRH60880 | Soybean | nucleus | 46.59 | 44.86 |
| CDY69936 | Canola | nucleus | 37.09 | 44.17 |
| GSMUA_Achr9P20090_001 | Banana | cytosol | 40.95 | 43.53 |
| CDY64672 | Canola | nucleus | 36.2 | 43.11 |
| CDY30258 | Canola | nucleus | 35.61 | 41.52 |
| CDX74442 | Canola | nucleus | 35.61 | 41.52 |
| KRH51562 | Soybean | nucleus | 45.99 | 41.44 |
| CDX67433 | Canola | nucleus | 35.31 | 41.32 |
| CDY37008 | Canola | nucleus | 35.31 | 41.32 |
| CDX75966 | Canola | nucleus | 33.83 | 40.57 |
| CDY14030 | Canola | nucleus | 37.69 | 40.32 |
| CDY51941 | Canola | nucleus | 34.72 | 39.13 |
| CDY40775 | Canola | nucleus | 37.39 | 38.89 |
| TraesCS7B01G143900.1 | Wheat | nucleus | 38.28 | 38.62 |
| PGSC0003DMT400025690 | Potato | nucleus | 40.65 | 38.59 |
| TraesCS7D01G246100.1 | Wheat | cytosol | 38.28 | 38.51 |
| EES14261 | Sorghum | nucleus | 38.87 | 38.42 |
| CDY18519 | Canola | nucleus | 34.42 | 38.41 |
| CDY51910 | Canola | nucleus | 28.49 | 38.4 |
| Os08t0511200-00 | Rice | cytosol | 39.47 | 38.33 |
| TraesCS7A01G247600.1 | Wheat | extracellular | 38.28 | 38.28 |
| CDY69369 | Canola | nucleus | 34.12 | 37.83 |
| CDY67593 | Canola | nucleus | 34.12 | 37.46 |
| CDY56940 | Canola | nucleus | 36.2 | 37.31 |
| CDY42875 | Canola | nucleus | 35.91 | 37.23 |
| CDX85242 | Canola | cytosol | 35.31 | 37.07 |
| CDX86391 | Canola | cytoskeleton, cytosol, nucleus | 33.53 | 36.57 |
| CDX75813 | Canola | nucleus | 33.23 | 36.36 |
| CDY20103 | Canola | nucleus | 32.64 | 36.3 |
| CDX82444 | Canola | nucleus | 33.23 | 36.25 |
| VIT_18s0122g00800.t01 | Wine grape | nucleus | 45.7 | 36.24 |
| CDY32316 | Canola | nucleus | 32.64 | 35.83 |
| CDY34773 | Canola | nucleus | 33.53 | 35.65 |
| CDX76817 | Canola | nucleus | 33.53 | 35.65 |
| CDY20314 | Canola | nucleus | 33.53 | 35.65 |
| CDX82566 | Canola | nucleus | 28.78 | 35.02 |
| CDY60115 | Canola | nucleus | 28.49 | 34.41 |
| CDX96262 | Canola | nucleus | 37.39 | 34.33 |
| CDY02636 | Canola | nucleus | 34.12 | 34.12 |
| CDY28805 | Canola | nucleus | 37.09 | 34.06 |
| CDY23558 | Canola | nucleus | 27.6 | 33.94 |
| CDY53250 | Canola | nucleus | 33.83 | 33.93 |
| CDY51238 | Canola | nucleus | 32.94 | 32.94 |
| CDX70804 | Canola | nucleus | 32.94 | 32.94 |
| CDY20001 | Canola | cytoskeleton, cytosol, nucleus | 36.2 | 32.8 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 32.94 | 32.36 |
| CDY42401 | Canola | nucleus | 30.56 | 32.09 |
| CDY42901 | Canola | nucleus | 32.64 | 31.98 |
| CDY10515 | Canola | nucleus | 30.27 | 31.68 |
| Zm00001d031463_P002 | Maize | mitochondrion | 38.87 | 31.04 |
| CDX99695 | Canola | mitochondrion | 24.93 | 30.77 |
| CDX98529 | Canola | mitochondrion | 24.93 | 30.77 |
| CDY35197 | Canola | nucleus | 28.19 | 28.44 |
| CDY14236 | Canola | cytosol | 27.6 | 27.68 |
| CDX97445 | Canola | cytosol | 27.6 | 27.68 |
| CDY38380 | Canola | nucleus | 28.19 | 27.62 |
| CDX92880 | Canola | nucleus | 5.34 | 9.09 |
| CDY51708 | Canola | nucleus | 5.34 | 9.05 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078DLX9 | EnsemblPlants:CDX88273 | ProteinID:CDX88273 | ProteinID:CDX88273.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00147768001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 |
| PANTHER:PTHR31744:SF49 | SUPFAM:SSF101941 | UniParc:UPI0004EF3707 | SEG:seg | : | : |
Description
BnaC06g37170D
Coordinates
chrLK031855:-:104822..106797
Molecular Weight (calculated)
38183.9 Da
IEP (calculated)
6.508
GRAVY (calculated)
-0.621
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MMLAVEDVLS ELAGEERNDR GLPPGFRFHP TDEELITFYL ASKVFHGGLC GIHIAEVDLN RCEPWELPEM AKMGEREWYF YSLRDRKYPT GLRTNRATTA
101: GYWKATGKDK EVFAGGGSGG GALVGMKKTL VFYKGRAPRG LKTKWVMHEY RLETDLSHRH TCKEEWVICR VFNKTGDRKN VGIHNQISYL HNTSLSTTHQ
201: QRNHNHYHHL EILPPLLEPS KTLTNFPSLL YDDTHQNYNN NLLHGSSGHN VDEFKTLINP AVSQLNGVIF SPEISNYNNE DDNNFGIKTE QYSNGGNNDL
301: DVRDYLDNPF CQEAGYGLLG LSSSPGPLML SDSPYVL
101: GYWKATGKDK EVFAGGGSGG GALVGMKKTL VFYKGRAPRG LKTKWVMHEY RLETDLSHRH TCKEEWVICR VFNKTGDRKN VGIHNQISYL HNTSLSTTHQ
201: QRNHNHYHHL EILPPLLEPS KTLTNFPSLL YDDTHQNYNN NLLHGSSGHN VDEFKTLINP AVSQLNGVIF SPEISNYNNE DDNNFGIKTE QYSNGGNNDL
301: DVRDYLDNPF CQEAGYGLLG LSSSPGPLML SDSPYVL
001: MMLAVEDVLS ELAGEERNER GLPPGFRFHP TDEELITFYL ASKIFHGGLS GIHISEVDLN RCEPWELPEM AKMGEREWYF YSLRDRKYPT GLRTNRATTA
101: GYWKATGKDK EVFSGGGGQL VGMKKTLVFY KGRAPRGLKT KWVMHEYRLE NDHSHRHTCK EEWVICRVFN KTGDRKNVGL IHNQISYLHN HSLSTTHHHH
201: HEALPLLIEP SNKTLTNFPS LLYDDPHQNY NNNNFLHGSS GHNIDELKAL INPVVSQLNG IIFPSGNNNN DEDDFDFNLG VKTEQSSNGN EIDVRDYLEN
301: PLFQEASYGL LGFSSSPGPL HMLLDSPCPL GFQL
101: GYWKATGKDK EVFSGGGGQL VGMKKTLVFY KGRAPRGLKT KWVMHEYRLE NDHSHRHTCK EEWVICRVFN KTGDRKNVGL IHNQISYLHN HSLSTTHHHH
201: HEALPLLIEP SNKTLTNFPS LLYDDPHQNY NNNNFLHGSS GHNIDELKAL INPVVSQLNG IIFPSGNNNN DEDDFDFNLG VKTEQSSNGN EIDVRDYLEN
301: PLFQEASYGL LGFSSSPGPL HMLLDSPCPL GFQL
Arabidopsis Description
NAC031Protein CUP-SHAPED COTYLEDON 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9S851]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.