Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032095.1-P | Field mustard | nucleus | 98.11 | 98.11 |
| CDY34773 | Canola | nucleus | 93.06 | 93.06 |
| AT2G24430.1 | Thale cress | nucleus | 92.74 | 93.04 |
| CDX76817 | Canola | nucleus | 92.11 | 92.11 |
| CDY68680 | Canola | nucleus | 38.17 | 57.62 |
| GSMUA_Achr6P01770_001 | Banana | cytosol, mitochondrion, nucleus | 41.32 | 56.71 |
| CDY70041 | Canola | nucleus | 38.17 | 56.54 |
| CDY29982 | Canola | cytosol | 30.6 | 56.4 |
| Solyc08g006020.2.1 | Tomato | nucleus | 52.37 | 54.97 |
| PGSC0003DMT400076103 | Potato | nucleus | 57.73 | 52.59 |
| CDY51707 | Canola | cytosol | 25.87 | 51.9 |
| Solyc08g074300.2.1 | Tomato | nucleus | 55.52 | 51.61 |
| CDX92881 | Canola | cytosol | 25.55 | 49.69 |
| VIT_04s0008g02710.t01 | Wine grape | nucleus | 50.47 | 49.23 |
| KRH61984 | Soybean | nucleus | 52.05 | 46.22 |
| KRH52643 | Soybean | cytoskeleton, cytosol, nucleus | 51.1 | 45.63 |
| CDX75966 | Canola | nucleus | 40.06 | 45.2 |
| CDY69936 | Canola | nucleus | 40.06 | 44.88 |
| KRH16201 | Soybean | cytoskeleton, cytosol, nucleus | 52.05 | 44.24 |
| CDY66026 | Canola | cytoskeleton, cytosol, nucleus | 35.96 | 44.02 |
| CDY64672 | Canola | nucleus | 39.12 | 43.82 |
| Os09t0497900-01 | Rice | cytosol | 47.63 | 42.9 |
| GSMUA_Achr7P19680_001 | Banana | cytosol, mitochondrion, nucleus | 44.16 | 42.81 |
| CDY51941 | Canola | nucleus | 39.75 | 42.14 |
| CDY18519 | Canola | nucleus | 40.06 | 42.05 |
| CDX67433 | Canola | nucleus | 38.17 | 42.01 |
| CDY14030 | Canola | nucleus | 41.64 | 41.9 |
| CDY69369 | Canola | nucleus | 39.75 | 41.45 |
| CDY37008 | Canola | nucleus | 37.54 | 41.32 |
| CDY56940 | Canola | nucleus | 42.59 | 41.28 |
| CDY40775 | Canola | nucleus | 41.96 | 41.05 |
| HORVU5Hr1G074810.1 | Barley | nucleus | 46.69 | 40.77 |
| CDY67593 | Canola | nucleus | 39.43 | 40.72 |
| GSMUA_Achr8P24680_001 | Banana | cytosol | 40.69 | 40.69 |
| TraesCS5D01G283200.1 | Wheat | mitochondrion, nucleus, plastid | 46.69 | 40.66 |
| EER99125 | Sorghum | nucleus | 47.95 | 40.43 |
| CDY42875 | Canola | nucleus | 41.32 | 40.31 |
| CDY20103 | Canola | nucleus | 38.49 | 40.26 |
| TraesCS5A01G275900.1 | Wheat | nucleus | 46.37 | 40.05 |
| TraesCS5B01G275200.1 | Wheat | nucleus | 46.37 | 39.95 |
| CDX75813 | Canola | nucleus | 38.49 | 39.61 |
| CDX82444 | Canola | nucleus | 38.49 | 39.48 |
| CDX74442 | Canola | nucleus | 35.96 | 39.45 |
| CDY30258 | Canola | nucleus | 35.96 | 39.45 |
| Zm00001d020982_P001 | Maize | cytosol, mitochondrion, nucleus | 46.69 | 39.36 |
| CDY32316 | Canola | nucleus | 37.85 | 39.09 |
| Zm00001d006053_P001 | Maize | nucleus | 47.32 | 38.66 |
| CDX85242 | Canola | cytosol | 38.8 | 38.32 |
| CDX86391 | Canola | cytoskeleton, cytosol, nucleus | 37.22 | 38.19 |
| CDY53250 | Canola | nucleus | 40.38 | 38.1 |
| CDY51910 | Canola | nucleus | 29.97 | 38.0 |
| CDX70804 | Canola | nucleus | 40.06 | 37.69 |
| CDY02636 | Canola | nucleus | 40.06 | 37.69 |
| CDY51238 | Canola | nucleus | 40.06 | 37.69 |
| CDX96262 | Canola | nucleus | 42.27 | 36.51 |
| CDY28805 | Canola | nucleus | 41.96 | 36.24 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 39.12 | 36.15 |
| CDY42901 | Canola | nucleus | 39.12 | 36.05 |
| CDY60115 | Canola | nucleus | 31.23 | 35.48 |
| CDY20411 | Canola | cytosol | 35.33 | 34.89 |
| CDX98529 | Canola | mitochondrion | 29.97 | 34.8 |
| CDX99695 | Canola | mitochondrion | 29.97 | 34.8 |
| CDY45986 | Canola | cytosol | 35.02 | 34.69 |
| CDX82566 | Canola | nucleus | 29.97 | 34.3 |
| CDX88273 | Canola | cytosol | 35.65 | 33.53 |
| CDX87602 | Canola | cytosol | 35.33 | 33.43 |
| CDY23558 | Canola | nucleus | 28.39 | 32.85 |
| CDY20001 | Canola | cytoskeleton, cytosol, nucleus | 37.22 | 31.72 |
| CDY10515 | Canola | nucleus | 31.55 | 31.06 |
| CDY42401 | Canola | nucleus | 31.23 | 30.84 |
| CDY14236 | Canola | cytosol | 30.28 | 28.57 |
| CDX97445 | Canola | cytosol | 30.28 | 28.57 |
| CDY35197 | Canola | nucleus | 28.71 | 27.25 |
| CDY38380 | Canola | nucleus | 29.02 | 26.74 |
| PGSC0003DMT400038464 | Potato | nucleus | 55.2 | 22.94 |
| CDY51708 | Canola | nucleus | 5.05 | 8.04 |
| CDX92880 | Canola | nucleus | 4.73 | 7.58 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078G4J6 | UniProt:A0A078G4J6 | EnsemblPlants:CDY20314 | ProteinID:CDY20314 |
| ProteinID:CDY20314.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00012247001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 |
| PANTHER:PTHR31744:SF50 | SUPFAM:SSF101941 | UniParc:UPI0004EEDCC2 | SEG:seg | : | : |
Description
BnaC04g36420DBnaC04g36420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G4J6]
Coordinates
chrLK032105:-:541668..544226
Molecular Weight (calculated)
35745.8 Da
IEP (calculated)
8.581
GRAVY (calculated)
-0.730
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQGDHQQQK KEEEALPPGF RFHPTDEELI SYYLVNKIAD QNFTGKAIAD VDLNKSEPWE LPEKAKMGGK EWYFFSLRDR KYPTGVRTNR ATNTGYWKTT
101: GKDKDIFNST TSELVGMKKT LVFYRGRAPR GEKTSWVMHE YRLHSKSSYR TSKQDEWVVC RVFKKTEAAK KYISNSSSST SHHHQNQTRA SILSANNNNP
201: SYSSDLLQLP SHLQPHTSLN INQTLMANAV HLAELSRVFR GSTSSTMDSA NQQLMSYNHM PVSGLSLNLG GALVQPPPPT VSLEDVVAVS ASFNGENGFG
301: NVEMSQCMDL DGYWPSY
101: GKDKDIFNST TSELVGMKKT LVFYRGRAPR GEKTSWVMHE YRLHSKSSYR TSKQDEWVVC RVFKKTEAAK KYISNSSSST SHHHQNQTRA SILSANNNNP
201: SYSSDLLQLP SHLQPHTSLN INQTLMANAV HLAELSRVFR GSTSSTMDSA NQQLMSYNHM PVSGLSLNLG GALVQPPPPT VSLEDVVAVS ASFNGENGFG
301: NVEMSQCMDL DGYWPSY
001: MEQGDHQQHK KEEEALPPGF RFHPTDEELI SYYLVNKIAD QNFTGKAIAD VDLNKSEPWE LPEKAKMGGK EWYFFSLRDR KYPTGVRTNR ATNTGYWKTT
101: GKDKEIFNST TSELVGMKKT LVFYRGRAPR GEKTCWVMHE YRLHSKSSYR TSKQDEWVVC RVFKKTEATK KYISTSSSST SHHHNNHTRA SILSTNNNNP
201: NYSSDLLQLP PHLQPHPSLN INQSLMANAV HLAELSRVFR ASTSTTMDSS HQQLMNYTHM PVSGLNLNLG GALVQPPPVV SLEDVAAVSA SYNGENGFGN
301: VEMSQCMDLD GYWPSY
101: GKDKEIFNST TSELVGMKKT LVFYRGRAPR GEKTCWVMHE YRLHSKSSYR TSKQDEWVVC RVFKKTEATK KYISTSSSST SHHHNNHTRA SILSTNNNNP
201: NYSSDLLQLP PHLQPHPSLN INQSLMANAV HLAELSRVFR ASTSTTMDSS HQQLMNYTHM PVSGLNLNLG GALVQPPPVV SLEDVAAVSA SYNGENGFGN
301: VEMSQCMDLD GYWPSY
Arabidopsis Description
ANAC038NAC domain containing protein 38 [Source:UniProtKB/TrEMBL;Acc:Q9ZQ25]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.