Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028685.1-P | Field mustard | nucleus | 95.37 | 98.41 |
| CDY14030 | Canola | nucleus | 93.52 | 96.19 |
| CDY69936 | Canola | nucleus | 74.07 | 84.81 |
| CDY64672 | Canola | nucleus | 74.07 | 84.81 |
| AT5G07680.1 | Thale cress | nucleus | 85.49 | 84.19 |
| CDY56940 | Canola | nucleus | 74.69 | 74.01 |
| CDY42875 | Canola | nucleus | 71.3 | 71.08 |
| CDY29982 | Canola | cytosol | 35.8 | 67.44 |
| CDY66026 | Canola | cytoskeleton, cytosol, nucleus | 45.99 | 57.53 |
| CDY68680 | Canola | nucleus | 36.42 | 56.19 |
| VIT_17s0000g06400.t01 | Wine grape | nucleus | 61.42 | 55.28 |
| CDY70041 | Canola | nucleus | 36.42 | 55.14 |
| CDY51707 | Canola | cytosol | 26.54 | 54.43 |
| KRH56898 | Soybean | nucleus | 58.33 | 54.0 |
| KRH03497 | Soybean | nucleus | 58.33 | 54.0 |
| CDX74442 | Canola | nucleus | 48.15 | 53.98 |
| CDY30258 | Canola | nucleus | 48.15 | 53.98 |
| CDY37008 | Canola | nucleus | 46.91 | 52.78 |
| CDX67433 | Canola | nucleus | 46.91 | 52.78 |
| CDX92881 | Canola | cytosol | 26.54 | 52.76 |
| CDX86391 | Canola | cytoskeleton, cytosol, nucleus | 47.53 | 49.84 |
| CDX85242 | Canola | cytosol | 49.07 | 49.53 |
| CDY53250 | Canola | nucleus | 45.68 | 44.05 |
| CDY02636 | Canola | nucleus | 45.68 | 43.92 |
| CDX75813 | Canola | nucleus | 41.67 | 43.83 |
| CDX75966 | Canola | nucleus | 37.96 | 43.77 |
| CDX82444 | Canola | nucleus | 41.67 | 43.69 |
| CDY20001 | Canola | cytoskeleton, cytosol, nucleus | 49.69 | 43.28 |
| CDY51910 | Canola | nucleus | 33.33 | 43.2 |
| CDX70804 | Canola | nucleus | 44.75 | 43.03 |
| CDY51238 | Canola | nucleus | 44.75 | 43.03 |
| CDY20103 | Canola | nucleus | 40.12 | 42.9 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 45.06 | 42.57 |
| CDY42901 | Canola | nucleus | 44.75 | 42.15 |
| CDY18519 | Canola | nucleus | 39.2 | 42.05 |
| CDY32316 | Canola | nucleus | 39.81 | 42.02 |
| CDY20314 | Canola | nucleus | 41.05 | 41.96 |
| CDY51941 | Canola | nucleus | 38.58 | 41.81 |
| CDX76817 | Canola | nucleus | 40.74 | 41.64 |
| CDY69369 | Canola | nucleus | 38.89 | 41.45 |
| CDY67593 | Canola | nucleus | 39.2 | 41.37 |
| CDY34773 | Canola | nucleus | 40.43 | 41.32 |
| CDY60115 | Canola | nucleus | 34.57 | 40.14 |
| CDX82566 | Canola | nucleus | 33.95 | 39.71 |
| CDY23558 | Canola | nucleus | 32.72 | 38.69 |
| CDY20411 | Canola | cytosol | 38.27 | 38.63 |
| CDY45986 | Canola | cytosol | 37.96 | 38.44 |
| CDX96262 | Canola | nucleus | 42.9 | 37.87 |
| CDX87602 | Canola | cytosol | 38.89 | 37.61 |
| CDX88273 | Canola | cytosol | 38.89 | 37.39 |
| CDY28805 | Canola | nucleus | 42.28 | 37.33 |
| CDX99695 | Canola | mitochondrion | 31.17 | 37.0 |
| CDX98529 | Canola | mitochondrion | 31.17 | 37.0 |
| CDY42401 | Canola | nucleus | 34.88 | 35.2 |
| CDY10515 | Canola | nucleus | 34.57 | 34.78 |
| CDX97445 | Canola | cytosol | 30.25 | 29.17 |
| CDY14236 | Canola | cytosol | 30.25 | 29.17 |
| CDY35197 | Canola | nucleus | 29.94 | 29.04 |
| CDY38380 | Canola | nucleus | 29.63 | 27.91 |
| CDY51708 | Canola | nucleus | 5.25 | 8.54 |
| CDX92880 | Canola | nucleus | 4.94 | 8.08 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078HQ99 | UniProt:A0A078HQ99 | EnsemblPlants:CDY40775 | ProteinID:CDY40775 |
| ProteinID:CDY40775.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00071676001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 |
| PANTHER:PTHR31744:SF7 | SUPFAM:SSF101941 | UniParc:UPI0004EEE189 | : | : | : |
Description
BnaAnng06380DBnaAnng06380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HQ99]
Coordinates
chrLK032478:-:203818..205163
Molecular Weight (calculated)
36937.7 Da
IEP (calculated)
8.718
GRAVY (calculated)
-0.657
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAFGGFHKE DDEQMVLPPG FRFHPTDEEL ITHYLHNKVL NIDFSAKAIG EVDLNKAEPW ELPYSYVCWT CFSYKAKMGE KEWYFFCVRD RKYPTGLRTN
101: RATQAGYWKA TGKDKEIFRG KSLVGMKKTL VFYRGRAPKG QKTNWVMHEY RLDGKLSPHN LPKTAKNEWV ICRVFHKTAG GKKIPISTLM QIGSYGGSGL
201: PPLTDSSPCN NTTKNEQTYV PCFSNQTETR GTLLNYFSNN PALSSIPLYQ PHSLHVSDPV LTQEQSVSQA MFENNRRQSF KTLSISQETG VSNTDIEFGR
301: RGMDHQEVPS SSTGPVDLEP FWSY
101: RATQAGYWKA TGKDKEIFRG KSLVGMKKTL VFYRGRAPKG QKTNWVMHEY RLDGKLSPHN LPKTAKNEWV ICRVFHKTAG GKKIPISTLM QIGSYGGSGL
201: PPLTDSSPCN NTTKNEQTYV PCFSNQTETR GTLLNYFSNN PALSSIPLYQ PHSLHVSDPV LTQEQSVSQA MFENNRRQSF KTLSISQETG VSNTDIEFGR
301: RGMDHQEVPS SSTGPVDLEP FWSY
001: METFGVFHKE DDEQMDLPPG FRFHPTDEEL ITHYLHKKVL DLGFSAKAIG EVDLNKAEPW ELPYKAKIGE KEWYFFCVRD RKYPTGLRTN RATQAGYWKA
101: TGKDKEIFRG KSLVGMKKTL VFYRGRAPKG QKTNWVMHEY RLDGKLSAHN LPKTAKNEWV ICRVFHKTAG GKKIPISTLI RIGSYGTGSS LPPLTDSSPY
201: NDKTKTEPVY VPCFSNQAET RGTILNCFSN PSLSSIQPDF LQMIPLYQPQ SLNISESSNP VLTQEQSVLQ AMMENNRRQN FKTLSISQET GVSNTDNSSV
301: FEFGRKRFDH QEVPSPSSGP VDLEPFWNY
101: TGKDKEIFRG KSLVGMKKTL VFYRGRAPKG QKTNWVMHEY RLDGKLSAHN LPKTAKNEWV ICRVFHKTAG GKKIPISTLI RIGSYGTGSS LPPLTDSSPY
201: NDKTKTEPVY VPCFSNQAET RGTILNCFSN PSLSSIQPDF LQMIPLYQPQ SLNISESSNP VLTQEQSVLQ AMMENNRRQN FKTLSISQET GVSNTDNSSV
301: FEFGRKRFDH QEVPSPSSGP VDLEPFWNY
Arabidopsis Description
NAC079NAC4 [Source:UniProtKB/TrEMBL;Acc:A0A178UL34]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.