Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021592.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY32316 | Canola | nucleus | 94.06 | 92.83 |
| CDX75813 | Canola | nucleus | 85.15 | 83.77 |
| CDX82444 | Canola | nucleus | 84.16 | 82.52 |
| AT3G15170.1 | Thale cress | nucleus | 80.86 | 79.03 |
| CDX99695 | Canola | mitochondrion | 67.66 | 75.09 |
| CDX98529 | Canola | mitochondrion | 67.66 | 75.09 |
| CDY29982 | Canola | cytosol | 32.01 | 56.4 |
| CDY68680 | Canola | nucleus | 37.29 | 53.81 |
| CDY70041 | Canola | nucleus | 37.29 | 52.8 |
| CDY51707 | Canola | cytosol | 25.08 | 48.1 |
| CDY64672 | Canola | nucleus | 43.23 | 46.29 |
| CDY69936 | Canola | nucleus | 42.9 | 45.94 |
| CDX92881 | Canola | cytosol | 24.42 | 45.4 |
| CDY66026 | Canola | cytoskeleton, cytosol, nucleus | 38.28 | 44.79 |
| KRH27280 | Soybean | nucleus | 49.84 | 44.02 |
| KRH22042 | Soybean | nucleus | 50.49 | 43.47 |
| GSMUA_Achr10P... | Banana | nucleus | 47.19 | 43.07 |
| CDX75966 | Canola | nucleus | 39.6 | 42.7 |
| Solyc07g062840.2.1 | Tomato | nucleus | 48.84 | 42.05 |
| CDX67433 | Canola | nucleus | 39.93 | 42.01 |
| VIT_19s0014g02200.t01 | Wine grape | nucleus | 50.16 | 41.87 |
| CDY30258 | Canola | nucleus | 39.93 | 41.87 |
| CDX74442 | Canola | nucleus | 39.93 | 41.87 |
| CDY18519 | Canola | nucleus | 41.25 | 41.39 |
| CDY37008 | Canola | nucleus | 39.27 | 41.32 |
| CDY14030 | Canola | nucleus | 42.9 | 41.27 |
| KRH26232 | Soybean | nucleus | 49.84 | 41.26 |
| CDY69369 | Canola | nucleus | 41.25 | 41.12 |
| CDY51941 | Canola | nucleus | 40.26 | 40.8 |
| CDY67593 | Canola | nucleus | 40.92 | 40.39 |
| KRH55187 | Soybean | nucleus | 49.84 | 40.27 |
| CDY40775 | Canola | nucleus | 42.9 | 40.12 |
| CDY56940 | Canola | nucleus | 43.23 | 40.06 |
| CDX96262 | Canola | nucleus | 47.52 | 39.24 |
| CDY28805 | Canola | nucleus | 47.52 | 39.24 |
| CDY51910 | Canola | nucleus | 32.01 | 38.8 |
| CDY42875 | Canola | nucleus | 41.58 | 38.77 |
| CDY20314 | Canola | nucleus | 40.26 | 38.49 |
| CDX76817 | Canola | nucleus | 39.93 | 38.17 |
| CDY34773 | Canola | nucleus | 39.93 | 38.17 |
| CDX86391 | Canola | cytoskeleton, cytosol, nucleus | 38.28 | 37.54 |
| Zm00001d035266_P001 | Maize | nucleus | 44.22 | 37.53 |
| Os06t0344900-00 | Rice | cytosol, nucleus, plastid | 45.21 | 36.73 |
| PGSC0003DMT400032280 | Potato | nucleus | 34.65 | 36.59 |
| CDX85242 | Canola | cytosol | 38.61 | 36.45 |
| CDX82566 | Canola | nucleus | 33.0 | 36.1 |
| CDY02636 | Canola | nucleus | 39.93 | 35.91 |
| Zm00001d041791_P001 | Maize | nucleus | 43.56 | 35.87 |
| CDY53250 | Canola | nucleus | 39.6 | 35.71 |
| TraesCS7D01G342300.1 | Wheat | nucleus | 42.57 | 35.64 |
| CDY60115 | Canola | nucleus | 32.67 | 35.48 |
| TraesCS7B01G246300.1 | Wheat | nucleus | 42.24 | 35.36 |
| TraesCS7A01G334800.1 | Wheat | nucleus | 42.24 | 35.26 |
| CDY23558 | Canola | nucleus | 31.68 | 35.04 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 39.6 | 34.99 |
| CDY42901 | Canola | nucleus | 39.27 | 34.59 |
| CDY51238 | Canola | nucleus | 38.28 | 34.42 |
| CDX70804 | Canola | nucleus | 38.28 | 34.42 |
| CDY45986 | Canola | cytosol | 35.64 | 33.75 |
| CDY20411 | Canola | cytosol | 35.64 | 33.64 |
| CDY10515 | Canola | nucleus | 35.31 | 33.23 |
| CDX87602 | Canola | cytosol | 36.63 | 33.13 |
| CDX88273 | Canola | cytosol | 36.3 | 32.64 |
| CDY42401 | Canola | nucleus | 34.32 | 32.4 |
| HORVU7Hr1G082420.2 | Barley | nucleus | 41.58 | 32.14 |
| CDY20001 | Canola | cytoskeleton, cytosol, nucleus | 39.27 | 31.99 |
| KXG23228 | Sorghum | plastid | 44.88 | 30.63 |
| CDY35197 | Canola | nucleus | 28.38 | 25.75 |
| CDY38380 | Canola | nucleus | 28.71 | 25.29 |
| CDX97445 | Canola | cytosol | 27.72 | 25.0 |
| CDY14236 | Canola | cytosol | 27.72 | 25.0 |
| CDX92880 | Canola | nucleus | 4.62 | 7.07 |
| CDY51708 | Canola | nucleus | 4.62 | 7.04 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078G643 | UniProt:A0A078G643 | EnsemblPlants:CDY20103 | ProteinID:CDY20103 |
| ProteinID:CDY20103.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00009956001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 |
| PANTHER:PTHR31744:SF22 | SUPFAM:SSF101941 | UniParc:UPI0002544180 | SEG:seg | : | : |
Description
BnaA01g28990DBnaA01g28990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G643]
Coordinates
chrLK032103:+:160176..161735
Molecular Weight (calculated)
33953.2 Da
IEP (calculated)
7.493
GRAVY (calculated)
-0.389
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMDVFSGWE RSSRYEDETI MPPGFRFHPT DEELITYYLL KKVLDSSFTC AAISQVDLNK SEPWELPEKA KLGEKEWYFF TLRDRKYPTG LRTNRATEAG
101: YWKATGKDRE IKSSKTKSLL GMKKTLVFYK GRAPKGEKSC WVMHEYRLDG KFSYQYLTSS VKDEWVLSKV SLKSSVVVGR EQTKLLSSST ASVAGEVSSS
201: APIIDAFATE HVSCFSNTSA AAHADTSFPT YLPAPPLSLP RQPRRIGGDD VAFGQFMDMG SSGQFNVDEA ATFLPYLPPT VLHPPQTFEL YGGSALSCWP
301: FAL
101: YWKATGKDRE IKSSKTKSLL GMKKTLVFYK GRAPKGEKSC WVMHEYRLDG KFSYQYLTSS VKDEWVLSKV SLKSSVVVGR EQTKLLSSST ASVAGEVSSS
201: APIIDAFATE HVSCFSNTSA AAHADTSFPT YLPAPPLSLP RQPRRIGGDD VAFGQFMDMG SSGQFNVDEA ATFLPYLPPT VLHPPQTFEL YGGSALSCWP
301: FAL
001: MDVDVFNGWG RPRFEDESLM PPGFRFHPTD EELITYYLLK KVLDSNFSCA AISQVDLNKS EPWELPEKAK MGEKEWYFFT LRDRKYPTGL RTNRATEAGY
101: WKATGKDREI KSSKTKSLLG MKKTLVFYKG RAPKGEKSCW VMHEYRLDGK FSYHYISSSA KDEWVLCKVC LKSGVVSRET NLISSSSSSA VTGEFSSAGS
201: AIAPIINTFA TEHVSCFSNN SAAHTDASFH TFLPAPPPSL PPRQPRHVGD GVAFGQFLDL GSSGQIDFDA AAAAFFPNLP SLPPTVLPPP PSFAMYGGGS
301: PAVSVWPFTL
101: WKATGKDREI KSSKTKSLLG MKKTLVFYKG RAPKGEKSCW VMHEYRLDGK FSYHYISSSA KDEWVLCKVC LKSGVVSRET NLISSSSSSA VTGEFSSAGS
201: AIAPIINTFA TEHVSCFSNN SAAHTDASFH TFLPAPPPSL PPRQPRHVGD GVAFGQFLDL GSSGQIDFDA AAAAFFPNLP SLPPTVLPPP PSFAMYGGGS
301: PAVSVWPFTL
Arabidopsis Description
NAC054CUC1 [Source:UniProtKB/TrEMBL;Acc:A0A178V703]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.