Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75813 | Canola | nucleus | 82.26 | 82.79 |
| CDX82444 | Canola | nucleus | 81.94 | 82.2 |
| Bra001586.1-P | Field mustard | nucleus | 81.94 | 82.2 |
| CDY20103 | Canola | nucleus | 79.03 | 80.86 |
| Bra021592.1-P | Field mustard | nucleus | 79.03 | 80.86 |
| CDY32316 | Canola | nucleus | 79.68 | 80.46 |
| CDX99695 | Canola | mitochondrion | 65.81 | 74.73 |
| CDX98529 | Canola | mitochondrion | 65.81 | 74.73 |
| KRH27280 | Soybean | nucleus | 49.68 | 44.9 |
| KRH22042 | Soybean | nucleus | 50.32 | 44.32 |
| Solyc07g062840.2.1 | Tomato | nucleus | 49.03 | 43.18 |
| VIT_19s0014g02200.t01 | Wine grape | nucleus | 50.32 | 42.98 |
| AT5G39610.1 | Thale cress | cytosol | 39.35 | 42.81 |
| GSMUA_Achr10P... | Banana | nucleus | 44.84 | 41.87 |
| KRH26232 | Soybean | nucleus | 49.35 | 41.8 |
| KRH55187 | Soybean | nucleus | 50.0 | 41.33 |
| AT2G24430.1 | Thale cress | nucleus | 41.29 | 40.51 |
| AT5G53950.1 | Thale cress | nucleus | 48.71 | 40.27 |
| AT5G07680.1 | Thale cress | nucleus | 42.58 | 40.12 |
| AT5G61430.1 | Thale cress | nucleus | 42.9 | 39.58 |
| AT3G18400.1 | Thale cress | nucleus | 39.68 | 39.17 |
| AT3G29035.1 | Thale cress | nucleus | 40.0 | 38.99 |
| Zm00001d035266_P001 | Maize | nucleus | 44.52 | 38.66 |
| PGSC0003DMT400032280 | Potato | nucleus | 35.16 | 37.98 |
| Os06t0344900-00 | Rice | cytosol, nucleus, plastid | 44.84 | 37.27 |
| TraesCS7D01G342300.1 | Wheat | nucleus | 42.58 | 36.46 |
| AT5G18270.1 | Thale cress | nucleus | 39.35 | 36.42 |
| TraesCS7B01G246300.1 | Wheat | nucleus | 42.26 | 36.19 |
| TraesCS7A01G334800.1 | Wheat | nucleus | 42.26 | 36.09 |
| Zm00001d041791_P001 | Maize | nucleus | 42.58 | 35.87 |
| AT3G04060.1 | Thale cress | nucleus | 39.03 | 35.8 |
| AT3G12977.1 | Thale cress | nucleus | 31.61 | 35.13 |
| AT1G76420.1 | Thale cress | cytosol | 37.1 | 34.43 |
| AT1G56010.2 | Thale cress | nucleus | 34.84 | 33.33 |
| HORVU7Hr1G082420.2 | Barley | nucleus | 41.61 | 32.91 |
| KXG23228 | Sorghum | plastid | 44.52 | 31.08 |
| AT4G28530.1 | Thale cress | nucleus | 28.71 | 25.28 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EntrezGene:820748 | UniProt:A0A178V703 | EMBL:AB049069 | ProteinID:AEE75627.1 |
| ArrayExpress:AT3G15170 | EnsemblPlantsGene:AT3G15170 | RefSeq:AT3G15170 | TAIR:AT3G15170 | RefSeq:AT3G15170-TAIR-G | EnsemblPlants:AT3G15170.1 |
| TAIR:AT3G15170.1 | ProteinID:BAB02571.1 | EMBL:BT026080 | Symbol:CUC1 | GO:GO:0000003 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009653 | GO:GO:0009790 | GO:GO:0009791 |
| GO:GO:0009908 | GO:GO:0009987 | GO:GO:0010014 | GO:GO:0010072 | GO:GO:0010223 | GO:GO:0048527 |
| GO:GO:0051782 | GO:GO:0090691 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf |
| RefSeq:NP_188135.1 | ProteinID:OAP01461.1 | PFAM:PF02365 | PO:PO:0000003 | PO:PO:0000037 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009046 |
| PO:PO:0025022 | PFscan:PS51005 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF22 | UniProt:Q9FRV4 | SUPFAM:SSF101941 |
| UniParc:UPI00000A3571 | SEG:seg | : | : | : | : |
Description
NAC054CUC1 [Source:UniProtKB/TrEMBL;Acc:A0A178V703]
Coordinates
chr3:+:5109782..5111608
Molecular Weight (calculated)
34234.5 Da
IEP (calculated)
8.202
GRAVY (calculated)
-0.320
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVDVFNGWG RPRFEDESLM PPGFRFHPTD EELITYYLLK KVLDSNFSCA AISQVDLNKS EPWELPEKAK MGEKEWYFFT LRDRKYPTGL RTNRATEAGY
101: WKATGKDREI KSSKTKSLLG MKKTLVFYKG RAPKGEKSCW VMHEYRLDGK FSYHYISSSA KDEWVLCKVC LKSGVVSRET NLISSSSSSA VTGEFSSAGS
201: AIAPIINTFA TEHVSCFSNN SAAHTDASFH TFLPAPPPSL PPRQPRHVGD GVAFGQFLDL GSSGQIDFDA AAAAFFPNLP SLPPTVLPPP PSFAMYGGGS
301: PAVSVWPFTL
101: WKATGKDREI KSSKTKSLLG MKKTLVFYKG RAPKGEKSCW VMHEYRLDGK FSYHYISSSA KDEWVLCKVC LKSGVVSRET NLISSSSSSA VTGEFSSAGS
201: AIAPIINTFA TEHVSCFSNN SAAHTDASFH TFLPAPPPSL PPRQPRHVGD GVAFGQFLDL GSSGQIDFDA AAAAFFPNLP SLPPTVLPPP PSFAMYGGGS
301: PAVSVWPFTL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.