CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035266_P001	Maize	nucleus	68.69	85.43
Zm00001d041791_P001	Maize	nucleus	65.09	78.53
Os06t0344900-00	Rice	cytosol, nucleus, plastid	63.96	76.14
TraesCS7B01G246300.1	Wheat	nucleus	59.46	72.93
TraesCS7D01G342300.1	Wheat	nucleus	59.46	72.93
TraesCS7A01G334800.1	Wheat	nucleus	59.46	72.73
HORVU7Hr1G082420.2	Barley	nucleus	61.71	69.9
EES02626	Sorghum	cytosol	15.99	49.65
GSMUA_Achr10P...	Banana	cytosol	39.19	49.01
KRH27280	Soybean	nucleus	37.39	48.4
VIT_19s0014g02200.t01	Wine grape	nucleus	39.19	47.93
GSMUA_Achr10P...	Banana	nucleus	35.81	47.89
Solyc07g062840.2.1	Tomato	nucleus	37.16	46.88
KRH22042	Soybean	nucleus	37.16	46.88
CDX75813	Canola	nucleus	31.76	45.78
Bra001586.1-P	Field mustard	nucleus	31.76	45.63
CDX82444	Canola	nucleus	31.76	45.63
KRH26232	Soybean	nucleus	37.61	45.63
KRH55187	Soybean	nucleus	38.51	45.6
CDY20103	Canola	nucleus	30.63	44.88
Bra021592.1-P	Field mustard	nucleus	30.63	44.88
CDY32316	Canola	nucleus	30.86	44.63
AT3G15170.1	Thale cress	nucleus	31.08	44.52
Bra022685.1-P	Field mustard	nucleus	36.04	43.6
CDY28805	Canola	nucleus	36.04	43.6
Bra003023.1-P	Field mustard	nucleus	34.91	43.42
CDX96262	Canola	nucleus	35.81	43.32
AT5G53950.1	Thale cress	nucleus	36.26	42.93
PGSC0003DMT400032280	Potato	nucleus	26.8	41.46
CDX98529	Canola	mitochondrion	24.55	39.93
CDX99695	Canola	mitochondrion	24.55	39.93
EER93792	Sorghum	cytosol, mitochondrion, nucleus	30.18	39.3
EES05451	Sorghum	nucleus	25.23	37.09
EES14261	Sorghum	nucleus	27.93	36.36
KXG26719	Sorghum	nucleus	23.65	36.21
EER99125	Sorghum	nucleus	30.41	35.9
EES13494	Sorghum	cytosol, nucleus, plastid	23.2	35.64
EES10946	Sorghum	cytosol, mitochondrion, nucleus	28.15	35.11
EER97754	Sorghum	nucleus	26.13	34.83
EER92328	Sorghum	cytosol	27.93	34.83
EER88807	Sorghum	nucleus	23.87	34.53
EES07725	Sorghum	cytosol	23.2	33.99
EES05316	Sorghum	nucleus	27.7	33.98
OQU82346	Sorghum	cytosol, nucleus, plastid	22.75	32.69
OQU79579	Sorghum	cytosol, nucleus, peroxisome	24.55	32.63
EES07908	Sorghum	nucleus, peroxisome, plastid	28.15	31.49
OQU89451	Sorghum	cytosol	24.77	29.57
EES02651	Sorghum	nucleus	26.13	29.0
KXG28945	Sorghum	cytoskeleton, nucleus, peroxisome	23.65	28.3
EES17917	Sorghum	cytosol	25.45	28.11
KXG28193	Sorghum	cytosol	17.34	27.5

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	UniProt:A0A1B6PC53	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009653	GO:GO:0009790	GO:GO:0009791	GO:GO:0009987	GO:GO:0010072
GO:GO:0010223	GO:GO:0048366	GO:GO:0090691	GO:GO:0090709	InterPro:IPR003441	InterPro:IPR036093
EnsemblPlants:KXG23228	ProteinID:KXG23228	ProteinID:KXG23228.1	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365
PFscan:PS51005	PANTHER:PTHR31744	PANTHER:PTHR31744:SF48	EnsemblPlantsGene:SORBI_3008G071400	SUPFAM:SSF101941	UniParc:UPI00081AE374
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:9586935..9591014

Molecular Weight (calculated)

46934.5 Da

IEP (calculated)

9.071

GRAVY (calculated)

-0.356

Length

444 amino acids

Sequence
(BLAST)

001: MPTIKPTPPA PPELHPQNRR ASLHYSHSTA AAVPREEQLR SAGRPETETT TMERFGVLGT RLGLDGVGIG GGGGGGELPP GFRFHPTDEE LITYYLLRKA
101: VDGSFCGRAI AEIDLNKCEP WELPDKAKMG EKEWYFYSLR DRKYPTGLRT NRATVAGYWK ATGKDREIRS GRSGALVGMK KTLVFYRGRA PKGHKTHWVM
201: HEFRLDGTYA YHFLPTSTRD EWVIARVFQK PGEVPPARKQ HHRLGGLSSA GESCFSDSTS ASIGGGGGAS ASSAPRPLPL TVTDASSLSL FAANAAADGD
301: TSSYCGGHGG GAANTGNKLV TGRELVPCFS TSTTTGAALD AAALGIGQPY NAAVPPPLAF EAPPLPTPAF FPNLRSSLQV QDNHLQLPLF LSAGGGGGLS
401: GTLGGGALHH WPFAGMEVKV EGRSAPPQMA VGPGQLDGAF GWGF

Best Arabidopsis Sequence Match ( AT5G53950.1 )
(BLAST)

001: MDIPYYHYDH GGDSQYLPPG FRFHPTDEEL ITHYLLRKVL DGCFSSRAIA EVDLNKCEPW QLPGRAKMGE KEWYFFSLRD RKYPTGLRTN RATEAGYWKA
101: TGKDREIFSS KTCALVGMKK TLVFYKGRAP KGEKSNWVMH EYRLEGKFSY HFISRSSKDE WVISRVFQKT TLASTGAVSE GGGGGGATVS VSSGTGPSKK
201: TKVPSTISRN YQEQPSSPSS VSLPPLLDPT TTLGYTDSSC SYDSRSTNTT VTASAITEHV SCFSTVPTTT TALGLDVNSF SRLPPPLGFD FDPFPRFVSR
301: NVSTQSNFRS FQENFNQFPY FGSSSASTMT SAVNLPSFQG GGGVSGMNYW LPATAEENES KVGVLHAGLD CIWNY

Arabidopsis Description

NAC098Protein CUP-SHAPED COTYLEDON 2 [Source:UniProtKB/Swiss-Prot;Acc:O04017]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.