CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d050893_P001	Maize	nucleus	80.39	83.62
Zm00001d016950_P002	Maize	nucleus	83.15	80.05
Os02t0579000-01	Rice	mitochondrion	63.54	66.67
EES10946	Sorghum	cytosol, mitochondrion, nucleus	55.8	56.74
EES02626	Sorghum	cytosol	20.44	51.75
EER88807	Sorghum	nucleus	33.98	40.07
EES13494	Sorghum	cytosol, nucleus, plastid	30.39	38.06
EER97754	Sorghum	nucleus	34.53	37.54
EER92328	Sorghum	cytosol	36.74	37.36
OQU82346	Sorghum	cytosol, nucleus, plastid	30.94	36.25
EER93792	Sorghum	cytosol, mitochondrion, nucleus	33.7	35.78
OQU79579	Sorghum	cytosol, nucleus, peroxisome	31.49	34.13
EES05451	Sorghum	nucleus	27.62	33.11
EES07725	Sorghum	cytosol	27.35	32.67
KXG26719	Sorghum	nucleus	25.97	32.41
EER99125	Sorghum	nucleus	33.43	32.18
EES14261	Sorghum	nucleus	29.28	31.09
EES07908	Sorghum	nucleus, peroxisome, plastid	33.43	30.48
KXG28193	Sorghum	cytosol	21.82	28.21
KXG28945	Sorghum	cytoskeleton, nucleus, peroxisome	28.45	27.76
KXG23228	Sorghum	plastid	33.98	27.7
OQU89451	Sorghum	cytosol	28.18	27.42
EES17917	Sorghum	cytosol	30.39	27.36
EES02651	Sorghum	nucleus	30.11	27.25

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EntrezGene:8070554	UniProt:C5XVR3	EnsemblPlants:EES05316	ProteinID:EES05316
ProteinID:EES05316.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093
InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31744	PANTHER:PTHR31744:SF12
EnsemblPlantsGene:SORBI_3004G191700	SUPFAM:SSF101941	unigene:Sbi.992	UniParc:UPI0001A858D9	RefSeq:XP_002452340.1	SEG:seg

Description

hypothetical protein

Coordinates

chr4:+:54350113..54352306

Molecular Weight (calculated)

38947.8 Da

IEP (calculated)

7.125

GRAVY (calculated)

-0.371

Length

362 amino acids

Sequence
(BLAST)

001: MEHDVHHHHH QQPEEAMELP PGFRFHPTDE ELITHYLARK AADPRFAPRA VGVADLNKCE PWDLPYRATM GEKEWYFFCV KDRKYPTGLR TNRATESGYW
101: KATGKDREIF RGKALVGLKK TLVFYTGRAP RGGKTGWVMH EYRLHGKHAA AAAAASSSSS LIPSVRAGAS KDDWVLCRVF KKSIEPPSSV AGGSKRSSSS
201: VACMGMEDVV GPSRSMADDF AASTLPPLMD VSGGSGGNMS LSAAAAAAAS IELTTPPAPH VTCFSNTLEG HFLTPPTCLL PSAAATASPF LASMAQYDGD
301: AGVGGMVHEL LQEAGGWYSK LGERERLSGG ASQDTGVTSE VNPAEISSTR HHMDHEASFW GF

Best Arabidopsis Sequence Match ( AT5G61430.1 )
(BLAST)

001: METFCGFQKE EEQMDLPPGF RFHPTDEELI THYLHKKVLD TSFSAKAIGE VDLNKSEPWE LPWMAKMGEK EWYFFCVRDR KYPTGLRTNR ATEAGYWKAT
101: GKDKEIYRGK SLVGMKKTLV FYRGRAPKGQ KTNWVMHEYR LEGKFSAHNL PKTAKNEWVI CRVFQKSAGG KKIPISSLIR IGSLGTDFNP SLLPSLTDSS
201: PYNDKTKTEP VYVPCFSNQT DQNQGTTLNC FSSPVLNSIQ ADIFHRIPLY QTQSLQVSMN LQSPVLTQEH SVLHAMIENN RRQSLKTMSV SQETGVSTDM
301: NTDISSDFEF GKRRFDSQED PSSSTGPVDL EPFWNY

Arabidopsis Description

NAC100NAC domain-containing protein 100 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLJ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.