CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER90487
KXG38822

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G04060.1	EER90487	AT1G32230.1	19548978
AT3G04060.1	KXG38822	AT1G32230.1	19548978

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005028_P001	Maize	cytosol	64.99	80.12
Zm00001d052390_P001	Maize	nucleus	59.95	64.15
CDY29982	Canola	cytosol	24.69	56.98
EES02626	Sorghum	cytosol	19.65	54.55
Os12t0123800-01	Rice	nucleus	49.12	49.24
GSMUA_Achr5P07600_001	Banana	cytosol	29.97	48.37
GSMUA_Achr10P...	Banana	cytosol	27.46	47.81
TraesCS5D01G148900.1	Wheat	nucleus	48.11	47.51
TraesCS5A01G143100.1	Wheat	nucleus	47.86	47.15
TraesCS5B01G141900.1	Wheat	nucleus	47.36	46.88
Os11t0127000-01	Rice	nucleus	31.49	42.37
HORVU5Hr1G045640.7	Barley	mitochondrion	47.1	41.1
GSMUA_Achr7P18330_001	Banana	nucleus	31.74	40.91
GSMUA_Achr9P16920_001	Banana	cytosol	30.98	40.2
GSMUA_Achr3P18020_001	Banana	nucleus	28.97	39.25
GSMUA_Achr3P09520_001	Banana	cytosol	30.23	37.74
EER97754	Sorghum	nucleus	31.23	37.24
CDY53250	Canola	nucleus	31.23	36.9
Bra023669.1-P	Field mustard	nucleus	31.23	36.9
GSMUA_Achr6P08600_001	Banana	nucleus	32.24	36.89
CDY02636	Canola	nucleus	31.23	36.8
EER92328	Sorghum	cytosol	32.75	36.52
AT5G18270.1	Thale cress	nucleus	30.73	36.42
GSMUA_Achr6P32290_001	Banana	nucleus	31.49	36.13
Bra002148.1-P	Field mustard	nucleus	30.23	35.71
Bra006449.1-P	Field mustard	nucleus	30.23	35.71
CDY51238	Canola	nucleus	30.23	35.61
CDX70804	Canola	nucleus	30.23	35.61
CDY50879	Canola	cytoskeleton, cytosol, nucleus	29.97	34.69
AT3G04060.1	Thale cress	nucleus	29.47	34.62
Bra031950.1-P	Field mustard	cytoskeleton, cytosol, nucleus	29.97	34.59
EER99125	Sorghum	nucleus	32.24	34.04
EER93792	Sorghum	cytosol, mitochondrion, nucleus	29.22	34.02
CDY42901	Canola	nucleus	29.47	34.01
OQU82346	Sorghum	cytosol, nucleus, plastid	26.2	33.66
EES10946	Sorghum	cytosol, mitochondrion, nucleus	29.97	33.43
EES05316	Sorghum	nucleus	30.48	33.43
KRG94783	Soybean	nucleus	34.01	33.33
Bra040153.1-P	Field mustard	nucleus	28.72	33.24
KRH06738	Soybean	nucleus	33.75	32.92
EER88807	Sorghum	nucleus	25.44	32.9
KRH70130	Soybean	nucleus	33.75	32.68
KRH08479	Soybean	nucleus	33.5	32.44
VIT_08s0007g07640.t01	Wine grape	nucleus	32.75	32.26
EES14261	Sorghum	nucleus	27.71	32.26
EES13494	Sorghum	cytosol, nucleus, plastid	23.43	32.18
EES05451	Sorghum	nucleus	24.43	32.12
EES02651	Sorghum	nucleus	30.98	30.75
KXG28945	Sorghum	cytoskeleton, nucleus, peroxisome	28.46	30.46
KXG26719	Sorghum	nucleus	22.17	30.34
EES07725	Sorghum	cytosol	22.92	30.03
OQU89451	Sorghum	cytosol	27.46	29.3
OQU79579	Sorghum	cytosol, nucleus, peroxisome	24.43	29.04
EES17917	Sorghum	cytosol	28.72	28.36
KXG23228	Sorghum	plastid	31.49	28.15
GSMUA_Achr8P21470_001	Banana	nucleus	34.51	26.55
KXG28193	Sorghum	cytosol	17.88	25.36

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EntrezGene:8067634	UniProt:C5Y3M2	EnsemblPlants:EES07908	ProteinID:EES07908
ProteinID:EES07908.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093
InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31744	PANTHER:PTHR31744:SF23
EnsemblPlantsGene:SORBI_3005G018700	SUPFAM:SSF101941	unigene:Sbi.9246	UniParc:UPI0001A860FE	RefSeq:XP_002448920.1	SEG:seg

Description

hypothetical protein

Coordinates

chr5:+:1682222..1684209

Molecular Weight (calculated)

42739.7 Da

IEP (calculated)

8.042

GRAVY (calculated)

-0.529

Length

397 amino acids

Sequence
(BLAST)

001: MVERSVKSEH GVDLFLPPGF RFHPTDEEVI TSYLLQKFLN PSFAPHAIGE VDLNKCEPWD LPSKANMGEK EWYFFCHKDM KYPTGTRTNR ATKEGYWKAT
101: GKDREIFKQP GRELVGMKKT LVFYMGRAPR GTKTNWVMHE FRLDGKSRHT NDSNSNLRFN PKDEWVVCKV HHKGGEEASS KKAGGGGGEE HYSSAGTPNV
201: SSVEAGEGGD EFLVDSLLDY SSYFNSSLPL TPSTTTTTIS AAAPPYNADL LYPVHTTTAA AAANAGLTTT TTTTSSRFVG LPTDGSNYSQ HAAAVANSVA
301: AATKNNDDDS SASWNMLRHA ADNKAAMGTN YSLHHQAMVA KVLGSGCGVS PNFGAGLPPA GSSVAAAGII AQNNVVPQQR LAGNYRGNYA AGYHTSK

Best Arabidopsis Sequence Match ( AT5G18270.2 )
(BLAST)

001: MAVVVEEGVV LNHGGEELVD LPPGFRFHPT DEEIITCYLK EKVLNSRFTA VAMGEADLNK CEPWDLPSKA KMGEKEFYFF CQRDRKYPTG MRTNRATESG
101: YWKATGKDKE IFKGKGCLVG MKKTLVFYRG RAPKGEKTNW VMHEYRLEGK YSYYNLPKSA RDEWVVCRVF HKNNPSTTTQ PMTRIPVEDF TRMDSLENID
201: HLLDFSSLPP LIDPSFMSQT EQPNFKPINP PTYDISSPIQ PHHFNSYQSI FNHQVFGSAS GSTYNNNNEM IKMEQSLVSV SQETCLSSDV NANMTTTTEV
301: SSGPVMKQEM GMMGMVNGSK SYEDLCDLRG DLWDF

Arabidopsis Description

ANAC087NAC domain-containing protein 87 [Source:UniProtKB/Swiss-Prot;Acc:Q9FK44]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.