CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014405_P001	Maize	nucleus	91.21	91.8
HORVU7Hr1G106480.1	Barley	nucleus	81.76	81.76
Os06t0675600-01	Rice	nucleus	80.78	81.58
TraesCS7B01G364600.1	Wheat	nucleus	81.11	81.11
TraesCS7A01G464100.1	Wheat	nucleus	81.11	81.11
TraesCS7D01G451700.1	Wheat	nucleus	81.76	80.45
TraesCS7B01G365300.1	Wheat	nucleus	79.8	80.33
TraesCS7D01G452500.1	Wheat	nucleus	80.13	79.87
TraesCS7A01G464800.1	Wheat	nucleus	79.48	79.22
HORVU7Hr1G106660.9	Barley	nucleus, plastid	79.15	66.94
GSMUA_Achr3P23360_001	Banana	nucleus	55.37	60.71
GSMUA_Achr11P...	Banana	nucleus	54.07	59.5
GSMUA_Achr8P33310_001	Banana	nucleus	54.72	59.36
GSMUA_Achr5P00500_001	Banana	nucleus	50.49	56.57
GSMUA_Achr5P26640_001	Banana	nucleus	53.42	54.85
KRH13649	Soybean	nucleus	52.44	53.14
GSMUA_Achr8P07120_001	Banana	nucleus	51.47	52.49
KRH43817	Soybean	nucleus	51.14	51.99
EES13494	Sorghum	cytosol, nucleus, plastid	48.86	51.9
CDY51910	Canola	nucleus	41.04	50.4
OQU82346	Sorghum	cytosol, nucleus, plastid	49.84	49.51
Bra034713.1-P	Field mustard	nucleus	44.3	49.45
VIT_19s0027g00230.t01	Wine grape	nucleus	47.23	49.15
CDY60115	Canola	nucleus	44.63	49.1
CDX82566	Canola	nucleus	43.97	48.74
Bra001480.1-P	Field mustard	nucleus	43.65	48.38
AT3G12977.1	Thale cress	nucleus	43.65	48.03
CDY23558	Canola	nucleus	42.67	47.81
OQU79579	Sorghum	cytosol, nucleus, peroxisome	49.51	45.51
Bra030820.1-P	Field mustard	nucleus	47.23	45.17
CDY42401	Canola	nucleus	47.23	45.17
AT1G56010.2	Thale cress	nucleus	46.91	44.44
Solyc07g066330.2.1	Tomato	nucleus	49.51	44.44
CDY10515	Canola	nucleus	46.58	44.41
EES02626	Sorghum	cytosol	20.52	44.06
PGSC0003DMT400056916	Potato	nucleus	49.84	43.84
KXG28193	Sorghum	cytosol	34.2	37.5
KXG26719	Sorghum	nucleus	33.55	35.52
EES07725	Sorghum	cytosol	34.85	35.31
EES05451	Sorghum	nucleus	34.2	34.77
EES05316	Sorghum	nucleus	40.07	33.98
EES10946	Sorghum	cytosol, mitochondrion, nucleus	37.46	32.3
EER97754	Sorghum	nucleus	34.85	32.13
EER93792	Sorghum	cytosol, mitochondrion, nucleus	34.53	31.09
EES14261	Sorghum	nucleus	31.27	28.15
EER92328	Sorghum	cytosol	32.57	28.09
EER99125	Sorghum	nucleus	33.55	27.39
OQU89451	Sorghum	cytosol	31.27	25.81
KXG28945	Sorghum	cytoskeleton, nucleus, peroxisome	30.94	25.61
EES07908	Sorghum	nucleus, peroxisome, plastid	32.9	25.44
EES17917	Sorghum	cytosol	32.57	24.88
EES02651	Sorghum	nucleus	31.6	24.25
KXG23228	Sorghum	plastid	34.53	23.87

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EntrezGene:8083201	UniProt:C5Z7T1	EnsemblPlants:EER88807	ProteinID:EER88807
ProteinID:EER88807.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093
InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31744	PANTHER:PTHR31744:SF45
EnsemblPlantsGene:SORBI_3010G227300	SUPFAM:SSF101941	UniParc:UPI0001A88F55	RefSeq:XP_002437440.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:+:57032262..57036574

Molecular Weight (calculated)

34152.5 Da

IEP (calculated)

7.844

GRAVY (calculated)

-0.453

Length

307 amino acids

Sequence
(BLAST)

001: MAINSLSMVE ARLPPGFRFH PRDDELVLDY LAKKLAGGAG VGGGPLVVSI YGCPAMVDVD LNKCEPWDLP EIACIGGKEW YFYSLRDRKY ATGQRTNRAT
101: DSGYWKATGK DRPISRKGLL VGMRKTLVFY QGRAPKGKKT EWVMHEFRME GQGDPMKLPF KEDWVLCRVF YKSRATVAKP PTESSSSFNI DAATTSLPPL
201: IDNNYNISFD QPGSSVQNLE GYEQVPCFSS NPSQLSSSIN APLSSAATMA DPEQHMGKSI IKDVLMSQFS RFEAGNVKRE APQSNFSQDG FEYLAESGFT
301: QMWNSFN

Best Arabidopsis Sequence Match ( AT1G56010.2 )
(BLAST)

001: METEEEMKES SISMVEAKLP PGFRFHPKDD ELVCDYLMRR SLHNNHRPPL VLIQVDLNKC EPWDIPKMAC VGGKDWYFYS QRDRKYATGL RTNRATATGY
101: WKATGKDRTI LRKGKLVGMR KTLVFYQGRA PRGRKTDWVM HEFRLQGSHH PPNHSLSSPK EDWVLCRVFH KNTEGVICRD NMGSCFDETA SASLPPLMDP
201: YINFDQEPSS YLSDDHHYII NEHVPCFSNL SQNQTLNSNL TNSVSELKIP CKNPNPLFTG GSASATLTGL DSFCSSDQMV LRALLSQLTK IDGSLGPKES
301: QSYGEGSSES LLTDIGIPST VWNC

Arabidopsis Description

NAC021NAC domain-containing protein 21/22 [Source:UniProtKB/Swiss-Prot;Acc:Q84TE6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.