Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G04060.1 | EER90487 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | KXG38822 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29982 | Canola | cytosol | 54.55 | 45.35 |
| TraesCS3A01G077900.1 | Wheat | nucleus | 57.34 | 38.32 |
| HORVU3Hr1G014090.1 | Barley | nucleus | 56.64 | 37.33 |
| TraesCS3B01G092800.1 | Wheat | cytosol | 53.85 | 36.15 |
| TraesCS3D01G078500.1 | Wheat | nucleus | 56.64 | 36.0 |
| GSMUA_Achr10P... | Banana | cytosol | 53.85 | 33.77 |
| GSMUA_Achr5P07600_001 | Banana | cytosol | 54.55 | 31.71 |
| TraesCS7B01G094000.1 | Wheat | nucleus | 54.55 | 28.57 |
| KXG28945 | Sorghum | cytoskeleton, nucleus, peroxisome | 72.73 | 28.03 |
| EES17917 | Sorghum | cytosol | 76.22 | 27.11 |
| GSMUA_Achr3P18020_001 | Banana | nucleus | 53.85 | 26.28 |
| EES02651 | Sorghum | nucleus | 73.43 | 26.25 |
| GSMUA_Achr9P16920_001 | Banana | cytosol | 55.94 | 26.14 |
| OQU89451 | Sorghum | cytosol | 67.13 | 25.81 |
| GSMUA_Achr7P18330_001 | Banana | nucleus | 55.24 | 25.65 |
| GSMUA_Achr3P09520_001 | Banana | cytosol | 56.64 | 25.47 |
| Os01t0104500-01 | Rice | cytosol, mitochondrion, nucleus | 56.64 | 25.31 |
| TraesCS5A01G245900.2 | Wheat | nucleus | 57.34 | 25.0 |
| Os01t0393100-01 | Rice | nucleus | 56.64 | 24.7 |
| TraesCS7B01G100300.1 | Wheat | nucleus | 53.85 | 23.84 |
| AT5G18270.1 | Thale cress | nucleus | 55.24 | 23.58 |
| TraesCS7D01G189900.1 | Wheat | nucleus | 53.15 | 23.53 |
| CDY53250 | Canola | nucleus | 55.24 | 23.51 |
| Bra023669.1-P | Field mustard | nucleus | 55.24 | 23.51 |
| CDY02636 | Canola | nucleus | 55.24 | 23.44 |
| EER97754 | Sorghum | nucleus | 54.55 | 23.42 |
| TraesCS7D01G154200.1 | Wheat | nucleus | 58.04 | 23.31 |
| Bra002148.1-P | Field mustard | nucleus | 54.55 | 23.21 |
| Bra006449.1-P | Field mustard | nucleus | 54.55 | 23.21 |
| CDX70804 | Canola | nucleus | 54.55 | 23.15 |
| CDY51238 | Canola | nucleus | 54.55 | 23.15 |
| AT3G04060.1 | Thale cress | nucleus | 54.55 | 23.08 |
| GSMUA_Achr6P08600_001 | Banana | nucleus | 55.94 | 23.05 |
| EER92328 | Sorghum | cytosol | 57.34 | 23.03 |
| TraesCS7A01G152500.1 | Wheat | nucleus | 57.34 | 23.03 |
| TraesCS7B01G056300.1 | Wheat | nucleus | 57.34 | 22.97 |
| HORVU7Hr1G031260.1 | Barley | nucleus | 56.64 | 22.88 |
| EES05451 | Sorghum | nucleus | 48.25 | 22.85 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 54.55 | 22.74 |
| Bra031950.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 54.55 | 22.67 |
| CDY42901 | Canola | nucleus | 53.85 | 22.38 |
| TraesCS7D01G543400.1 | Wheat | nucleus | 53.15 | 22.35 |
| EES14261 | Sorghum | nucleus | 53.15 | 22.29 |
| TraesCS7B01G489500.2 | Wheat | cytosol | 53.85 | 22.19 |
| Bra040153.1-P | Field mustard | nucleus | 53.15 | 22.16 |
| EES07725 | Sorghum | cytosol | 46.85 | 22.11 |
| TraesCS7D01G196300.1 | Wheat | cytosol, nucleus, peroxisome | 53.85 | 22.06 |
| GSMUA_Achr6P32290_001 | Banana | nucleus | 53.15 | 21.97 |
| EES13494 | Sorghum | cytosol, nucleus, plastid | 44.06 | 21.8 |
| TraesCS7A01G194700.1 | Wheat | nucleus | 53.15 | 21.78 |
| KXG26719 | Sorghum | nucleus | 44.06 | 21.72 |
| HORVU4Hr1G089450.1 | Barley | cytosol, mitochondrion, nucleus, peroxisome | 53.15 | 21.71 |
| HORVU7Hr1G039700.1 | Barley | nucleus | 52.45 | 21.68 |
| EES10946 | Sorghum | cytosol, mitochondrion, nucleus | 53.85 | 21.63 |
| TraesCS7A01G189200.1 | Wheat | nucleus | 52.45 | 21.49 |
| OQU82346 | Sorghum | cytosol, nucleus, plastid | 46.15 | 21.36 |
| TraesCS5B01G243300.1 | Wheat | nucleus | 39.86 | 21.27 |
| Zm00001d008403_P001 | Maize | plastid | 47.55 | 21.12 |
| EER93792 | Sorghum | cytosol, mitochondrion, nucleus | 50.35 | 21.11 |
| EER99125 | Sorghum | nucleus | 55.24 | 21.01 |
| TraesCS7A01G569300.1 | Wheat | cytosol | 53.15 | 20.99 |
| KRG94783 | Soybean | nucleus | 58.74 | 20.74 |
| TraesCS3B01G092900.3 | Wheat | nucleus | 51.75 | 20.73 |
| TraesCS7D01G543500.2 | Wheat | endoplasmic reticulum | 54.55 | 20.53 |
| EER88807 | Sorghum | nucleus | 44.06 | 20.52 |
| EES05316 | Sorghum | nucleus | 51.75 | 20.44 |
| KRH06738 | Soybean | nucleus | 58.04 | 20.39 |
| HORVU7Hr1G122680.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 52.45 | 20.27 |
| TraesCS7A01G569100.1 | Wheat | nucleus | 53.85 | 20.26 |
| VIT_08s0007g07640.t01 | Wine grape | nucleus | 55.94 | 19.85 |
| EES07908 | Sorghum | nucleus, peroxisome, plastid | 54.55 | 19.65 |
| KRH08479 | Soybean | nucleus | 55.94 | 19.51 |
| KRH70130 | Soybean | nucleus | 55.94 | 19.51 |
| OQU79579 | Sorghum | cytosol, nucleus, peroxisome | 44.76 | 19.16 |
| HORVU3Hr1G014100.1 | Barley | cytosol, nucleus | 49.65 | 18.83 |
| KXG23228 | Sorghum | plastid | 49.65 | 15.99 |
| GSMUA_Achr8P21470_001 | Banana | nucleus | 54.55 | 15.12 |
| KXG28193 | Sorghum | cytosol | 29.37 | 15.0 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | UniProt:C5XEY0 | EnsemblPlants:EES02626 | ProteinID:EES02626 | ProteinID:EES02626.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF23 | EnsemblPlantsGene:SORBI_3003G101100 |
| SUPFAM:SSF101941 | UniParc:UPI0001A84CCF | RefSeq:XP_002457506.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:8934324..8935492
Molecular Weight (calculated)
16677.9 Da
IEP (calculated)
9.679
GRAVY (calculated)
-0.824
Length
143 amino acids
Sequence
(BLAST)
(BLAST)
001: MADQQQQQEM NDVCASGLNL PIGFHFDPSD FEIVNHFIRN KVRNRDYTCT AIGEVDLNKT EPWDLLKEAK MGEKEWYFFY QKDRKYPTGL RVNWATKAGY
101: WKATGKDKKV YKPSKGEEVV LLVGMKKTLV FYKSRAPRGD KTN
101: WKATGKDKKV YKPSKGEEVV LLVGMKKTLV FYKSRAPRGD KTN
001: MDYKVSRSGE IVEGEVEDSE KIDLPPGFRF HPTDEELITH YLRPKVVNSF FSAIAIGEVD LNKVEPWDLP WKAKLGEKEW YFFCVRDRKY PTGLRTNRAT
101: KAGYWKATGK DKEIFKGKSL VGMKKTLVFY KGRAPKGVKT NWVMHEYRLE GKFAIDNLSK TAKNECVISR VFHTRTDGTK EHMSVGLPPL MDSSPYLKSR
201: GQDSLAGTTL GGLLSHVTYF SDQTTDDKSL VADFKTTMFG SGSTNFLPNI GSLLDFDPLF LQNNSSVLKM LLDNEETQFK KNLHNSGSSE SELTASSWQG
301: HNSYGSTGPV NLDCVWKF
101: KAGYWKATGK DKEIFKGKSL VGMKKTLVFY KGRAPKGVKT NWVMHEYRLE GKFAIDNLSK TAKNECVISR VFHTRTDGTK EHMSVGLPPL MDSSPYLKSR
201: GQDSLAGTTL GGLLSHVTYF SDQTTDDKSL VADFKTTMFG SGSTNFLPNI GSLLDFDPLF LQNNSSVLKM LLDNEETQFK KNLHNSGSSE SELTASSWQG
301: HNSYGSTGPV NLDCVWKF
Arabidopsis Description
NAC59NAC domain-containing protein 59 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJW3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.