Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU0Hr1G014460.1 | |
| HORVU1Hr1G050960.7 | |
| HORVU5Hr1G124010.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G04060.1 | HORVU0Hr1G014460.1 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | HORVU1Hr1G050960.7 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | HORVU5Hr1G124010.1 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G489500.2 | Wheat | cytosol | 77.57 | 82.71 |
| TraesCS7D01G543500.2 | Wheat | endoplasmic reticulum | 82.97 | 80.79 |
| TraesCS7A01G569100.1 | Wheat | nucleus | 81.89 | 79.74 |
| TraesCS7A01G569300.1 | Wheat | cytosol | 77.3 | 79.01 |
| TraesCS7D01G543400.1 | Wheat | nucleus | 71.62 | 77.94 |
| HORVU7Hr1G031260.1 | Barley | nucleus | 59.73 | 62.43 |
| HORVU7Hr1G039700.1 | Barley | nucleus | 57.03 | 60.98 |
| HORVU4Hr1G089450.1 | Barley | cytosol, mitochondrion, nucleus, peroxisome | 55.68 | 58.86 |
| HORVU3Hr1G014090.1 | Barley | nucleus | 32.97 | 56.22 |
| HORVU3Hr1G014100.1 | Barley | cytosol, nucleus | 56.22 | 55.17 |
| CDY29982 | Canola | cytosol | 25.41 | 54.65 |
| EES02626 | Sorghum | cytosol | 20.27 | 52.45 |
| GSMUA_Achr10P... | Banana | cytosol | 30.81 | 50.0 |
| GSMUA_Achr5P07600_001 | Banana | cytosol | 31.62 | 47.56 |
| HORVU2Hr1G017360.1 | Barley | nucleus | 18.11 | 44.08 |
| Os01t0104500-01 | Rice | cytosol, mitochondrion, nucleus | 37.57 | 43.44 |
| HORVU2Hr1G017380.1 | Barley | cytosol, nucleus, plastid | 27.57 | 43.4 |
| GSMUA_Achr9P16920_001 | Banana | cytosol | 34.32 | 41.5 |
| Os01t0393100-01 | Rice | nucleus | 36.49 | 41.16 |
| GSMUA_Achr7P18330_001 | Banana | nucleus | 33.78 | 40.58 |
| HORVU4Hr1G012030.1 | Barley | cytosol, mitochondrion, nucleus | 32.7 | 40.47 |
| GSMUA_Achr3P18020_001 | Banana | nucleus | 30.0 | 37.88 |
| GSMUA_Achr3P09520_001 | Banana | cytosol | 32.43 | 37.74 |
| GSMUA_Achr6P32290_001 | Banana | nucleus | 34.86 | 37.28 |
| GSMUA_Achr6P08600_001 | Banana | nucleus | 34.59 | 36.89 |
| HORVU4Hr1G051360.3 | Barley | nucleus | 33.51 | 35.84 |
| HORVU5Hr1G074810.1 | Barley | nucleus | 34.59 | 35.26 |
| CDY02636 | Canola | nucleus | 31.62 | 34.72 |
| Bra023669.1-P | Field mustard | nucleus | 31.35 | 34.52 |
| CDY53250 | Canola | nucleus | 31.35 | 34.52 |
| CDX70804 | Canola | nucleus | 31.35 | 34.42 |
| AT5G18270.1 | Thale cress | nucleus | 30.81 | 34.03 |
| Zm00001d040189_P002 | Maize | mitochondrion, nucleus, peroxisome | 35.95 | 34.02 |
| Bra006449.1-P | Field mustard | nucleus | 30.81 | 33.93 |
| CDY51238 | Canola | nucleus | 30.81 | 33.83 |
| AT3G04060.1 | Thale cress | nucleus | 30.81 | 33.73 |
| Bra002148.1-P | Field mustard | nucleus | 30.27 | 33.33 |
| HORVU7Hr1G106480.1 | Barley | nucleus | 27.57 | 33.22 |
| CDY42901 | Canola | nucleus | 30.81 | 33.14 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 30.54 | 32.94 |
| Bra031950.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 30.54 | 32.85 |
| Bra040153.1-P | Field mustard | nucleus | 30.27 | 32.65 |
| KXG28945 | Sorghum | cytoskeleton, nucleus, peroxisome | 32.7 | 32.61 |
| HORVU2Hr1G089210.4 | Barley | cytosol, mitochondrion, nucleus | 24.59 | 32.27 |
| OQU89451 | Sorghum | cytosol | 32.43 | 32.26 |
| EES02651 | Sorghum | nucleus | 34.59 | 32.0 |
| Zm00001d008403_P001 | Maize | plastid | 27.84 | 31.99 |
| HORVU2Hr1G103930.1 | Barley | mitochondrion | 25.41 | 31.86 |
| KRG94783 | Soybean | nucleus | 34.59 | 31.6 |
| EES17917 | Sorghum | cytosol | 34.32 | 31.59 |
| VIT_08s0007g07640.t01 | Wine grape | nucleus | 33.78 | 31.02 |
| KRH06738 | Soybean | nucleus | 33.78 | 30.71 |
| HORVU0Hr1G017490.7 | Barley | nucleus | 25.68 | 30.55 |
| KRH08479 | Soybean | nucleus | 33.78 | 30.49 |
| HORVU2Hr1G017400.3 | Barley | nucleus | 31.08 | 30.03 |
| HORVU2Hr1G080460.8 | Barley | plastid | 32.97 | 29.83 |
| KRH70130 | Soybean | nucleus | 32.97 | 29.76 |
| HORVU2Hr1G017350.1 | Barley | nucleus | 30.27 | 28.21 |
| HORVU7Hr1G072670.3 | Barley | cytosol, plastid | 25.68 | 27.86 |
| HORVU7Hr1G106660.9 | Barley | nucleus, plastid | 27.3 | 27.82 |
| HORVU7Hr1G082420.2 | Barley | nucleus | 29.19 | 27.55 |
| HORVU2Hr1G017370.1 | Barley | cytosol, nucleus, plastid | 30.27 | 26.35 |
| HORVU5Hr1G045640.7 | Barley | mitochondrion | 31.35 | 25.49 |
| GSMUA_Achr8P21470_001 | Banana | nucleus | 35.14 | 25.19 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | UniProt:A0A287Y292 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:HORVU7Hr1G122680 | EnsemblPlants:HORVU7Hr1G122680.1 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf |
| PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF23 | SUPFAM:SSF101941 | UniParc:UPI000B47DCA3 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:+:656909694..656911652
Molecular Weight (calculated)
41722.0 Da
IEP (calculated)
6.568
GRAVY (calculated)
-0.397
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: VIYIFMVASN ISITLESIAE KASTMTDHLQ VQQQALELPP GFRFHPTDEE IIKFYVVPKV LDEAFVAAAI EVVNLNKYEP WELPEKAKMG ENEWYFYSRK
101: DRKYPTGIRT NRATDVGYWK ATGKDKEIFD PPLTLIGMKK TLVFYKGRAP RGEKTNWVMH EYRIESSKQL ISNSTTATSR ISTTKAASKE QWVVCRIFHK
201: STGLKKMVMP SYDMPMSMAA EHQHDFVGLD TLPPLMDYDM SSTLAHPPLF PGATSYQLHN VESGSSMMGS VALPMMNDHY YGNHHHQVMA APTLPLSLYQ
301: HQQQHQQMMI HMGADQGFMV GAEPGSGMSS MLSQEDAVAG LRNNYPGNTT ATAVGETSWM NMGMDDIWQN
101: DRKYPTGIRT NRATDVGYWK ATGKDKEIFD PPLTLIGMKK TLVFYKGRAP RGEKTNWVMH EYRIESSKQL ISNSTTATSR ISTTKAASKE QWVVCRIFHK
201: STGLKKMVMP SYDMPMSMAA EHQHDFVGLD TLPPLMDYDM SSTLAHPPLF PGATSYQLHN VESGSSMMGS VALPMMNDHY YGNHHHQVMA APTLPLSLYQ
301: HQQQHQQMMI HMGADQGFMV GAEPGSGMSS MLSQEDAVAG LRNNYPGNTT ATAVGETSWM NMGMDDIWQN
001: MEQGDHQQHK KEEEALPPGF RFHPTDEELI SYYLVNKIAD QNFTGKAIAD VDLNKSEPWE LPEKAKMGGK EWYFFSLRDR KYPTGVRTNR ATNTGYWKTT
101: GKDKEIFNST TSELVGMKKT LVFYRGRAPR GEKTCWVMHE YRLHSKSSYR TSKQDEWVVC RVFKKTEATK KYISTSSSST SHHHNNHTRA SILSTNNNNP
201: NYSSDLLQLP PHLQPHPSLN INQSLMANAV HLAELSRVFR ASTSTTMDSS HQQLMNYTHM PVSGLNLNLG GALVQPPPVV SLEDVAAVSA SYNGENGFGN
301: VEMSQCMDLD GYWPSY
101: GKDKEIFNST TSELVGMKKT LVFYRGRAPR GEKTCWVMHE YRLHSKSSYR TSKQDEWVVC RVFKKTEATK KYISTSSSST SHHHNNHTRA SILSTNNNNP
201: NYSSDLLQLP PHLQPHPSLN INQSLMANAV HLAELSRVFR ASTSTTMDSS HQQLMNYTHM PVSGLNLNLG GALVQPPPVV SLEDVAAVSA SYNGENGFGN
301: VEMSQCMDLD GYWPSY
Arabidopsis Description
ANAC038NAC domain containing protein 38 [Source:UniProtKB/TrEMBL;Acc:Q9ZQ25]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.