Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU0Hr1G014460.1 | |
| HORVU1Hr1G050960.7 | |
| HORVU5Hr1G124010.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G04060.1 | HORVU0Hr1G014460.1 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | HORVU1Hr1G050960.7 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | HORVU5Hr1G124010.1 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G017360.1 | Barley | nucleus | 37.53 | 98.03 |
| TraesCS2A01G101100.1 | Wheat | cytosol, nucleus, plastid | 73.05 | 83.33 |
| TraesCS2B01G118200.1 | Wheat | cytosol, nucleus, plastid | 73.55 | 83.19 |
| TraesCS2B01G118400.1 | Wheat | cytosol, nucleus, plastid | 73.55 | 83.19 |
| TraesCS2D01G100600.1 | Wheat | cytosol, nucleus, plastid | 74.81 | 80.71 |
| HORVU2Hr1G017400.3 | Barley | nucleus | 76.32 | 79.11 |
| HORVU2Hr1G017370.1 | Barley | cytosol, nucleus, plastid | 84.38 | 78.82 |
| TraesCS2A01G101000.1 | Wheat | cytosol, nucleus, plastid | 75.06 | 78.01 |
| HORVU2Hr1G017380.1 | Barley | cytosol, nucleus, plastid | 45.34 | 76.6 |
| TraesCS2B01G118300.1 | Wheat | cytosol | 73.55 | 75.26 |
| TraesCS2D01G100700.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 75.06 | 69.79 |
| EER97754 | Sorghum | nucleus | 48.61 | 57.96 |
| CDY29982 | Canola | cytosol | 24.94 | 57.56 |
| Os07t0684800-01 | Rice | cytosol | 43.32 | 57.14 |
| Zm00001d022517_P001 | Maize | nucleus | 45.59 | 56.92 |
| GSMUA_Achr10P... | Banana | cytosol | 29.22 | 50.88 |
| GSMUA_Achr5P07600_001 | Banana | cytosol | 30.73 | 49.59 |
| HORVU4Hr1G051360.3 | Barley | nucleus | 42.82 | 49.13 |
| HORVU3Hr1G014090.1 | Barley | nucleus | 25.19 | 46.08 |
| GSMUA_Achr3P18020_001 | Banana | nucleus | 33.25 | 45.05 |
| GSMUA_Achr9P16920_001 | Banana | cytosol | 32.49 | 42.16 |
| GSMUA_Achr6P32290_001 | Banana | nucleus | 35.77 | 41.04 |
| GSMUA_Achr7P18330_001 | Banana | nucleus | 31.23 | 40.26 |
| CDY53250 | Canola | nucleus | 34.01 | 40.18 |
| CDY02636 | Canola | nucleus | 34.01 | 40.06 |
| Bra023669.1-P | Field mustard | nucleus | 33.75 | 39.88 |
| Bra002148.1-P | Field mustard | nucleus | 33.75 | 39.88 |
| CDY51238 | Canola | nucleus | 33.75 | 39.76 |
| CDX70804 | Canola | nucleus | 33.75 | 39.76 |
| GSMUA_Achr3P09520_001 | Banana | cytosol | 31.74 | 39.62 |
| Bra006449.1-P | Field mustard | nucleus | 33.5 | 39.58 |
| AT5G18270.1 | Thale cress | nucleus | 33.25 | 39.4 |
| AT3G04060.1 | Thale cress | nucleus | 33.5 | 39.35 |
| GSMUA_Achr6P08600_001 | Banana | nucleus | 34.01 | 38.9 |
| HORVU4Hr1G012030.1 | Barley | cytosol, mitochondrion, nucleus | 28.46 | 37.79 |
| Bra040153.1-P | Field mustard | nucleus | 32.24 | 37.32 |
| CDY42901 | Canola | nucleus | 32.24 | 37.21 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 31.99 | 37.03 |
| KRG94783 | Soybean | nucleus | 37.53 | 36.79 |
| Bra031950.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 31.74 | 36.63 |
| KRH06738 | Soybean | nucleus | 37.53 | 36.61 |
| VIT_08s0007g07640.t01 | Wine grape | nucleus | 35.52 | 34.99 |
| KRH08479 | Soybean | nucleus | 35.52 | 34.39 |
| KRH70130 | Soybean | nucleus | 35.52 | 34.39 |
| HORVU7Hr1G106480.1 | Barley | nucleus | 26.45 | 34.2 |
| HORVU5Hr1G074810.1 | Barley | nucleus | 30.73 | 33.61 |
| HORVU2Hr1G089210.4 | Barley | cytosol, mitochondrion, nucleus | 23.68 | 33.33 |
| HORVU2Hr1G103930.1 | Barley | mitochondrion | 24.18 | 32.54 |
| HORVU7Hr1G031260.1 | Barley | nucleus | 28.97 | 32.49 |
| HORVU4Hr1G089450.1 | Barley | cytosol, mitochondrion, nucleus, peroxisome | 27.2 | 30.86 |
| HORVU7Hr1G039700.1 | Barley | nucleus | 26.7 | 30.64 |
| HORVU7Hr1G122680.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 28.21 | 30.27 |
| HORVU3Hr1G014100.1 | Barley | cytosol, nucleus | 27.96 | 29.44 |
| HORVU2Hr1G080460.8 | Barley | plastid | 30.23 | 29.34 |
| HORVU0Hr1G017490.7 | Barley | nucleus | 22.92 | 29.26 |
| HORVU7Hr1G072670.3 | Barley | cytosol, plastid | 24.69 | 28.74 |
| HORVU7Hr1G106660.9 | Barley | nucleus, plastid | 26.2 | 28.65 |
| HORVU7Hr1G082420.2 | Barley | nucleus | 28.21 | 28.57 |
| GSMUA_Achr8P21470_001 | Banana | nucleus | 35.77 | 27.52 |
| HORVU5Hr1G045640.7 | Barley | mitochondrion | 28.21 | 24.62 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | UniProt:A0A287H797 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:HORVU2Hr1G017350 | EnsemblPlants:HORVU2Hr1G017350.1 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf |
| PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF47 | SUPFAM:SSF101941 | UniParc:UPI000B464953 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:40851300..40853328
Molecular Weight (calculated)
43166.9 Da
IEP (calculated)
4.618
GRAVY (calculated)
-0.323
Length
397 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDVTAVMDL GVEEPQLSLP PGFRFPPTDE EVVTDYLTRK VLHESFSCQV ITDVDLNKNE PWDLPGECSG VLLVYSSTRA SFFDLICSTL MAGSCFSAGL
101: AKMGEKEWFF FVHKSRKYPT GTRTNRATER GHWKATGKDK EIYRGKVLVG MKKTLVFYTG RAPSGGKTPW VMHEYRLEGQ LPHRLPPTAK DDWAVCRVFN
201: KDLAAAAKNA PRMAPAADGA MEDPLAFLDV DGLFNYDELL NNAGLLDDAD LPMLMDSPSG ADDFAARASS STSSAALPLD PDTEHLTIKT EPPVPQQQTQ
301: SPSYFFMPAA TANGNHGGAG YSPYEEAMGD QQTAIRMHCK PEAASSSALL SPSLGLFDTG ALAGAAGTSF PMPSSQSYVD LEELCRGEPP MDFSNMW
101: AKMGEKEWFF FVHKSRKYPT GTRTNRATER GHWKATGKDK EIYRGKVLVG MKKTLVFYTG RAPSGGKTPW VMHEYRLEGQ LPHRLPPTAK DDWAVCRVFN
201: KDLAAAAKNA PRMAPAADGA MEDPLAFLDV DGLFNYDELL NNAGLLDDAD LPMLMDSPSG ADDFAARASS STSSAALPLD PDTEHLTIKT EPPVPQQQTQ
301: SPSYFFMPAA TANGNHGGAG YSPYEEAMGD QQTAIRMHCK PEAASSSALL SPSLGLFDTG ALAGAAGTSF PMPSSQSYVD LEELCRGEPP MDFSNMW
001: MVEEGGVVVN QGGDQEVVDL PPGFRFHPTD EEIITHYLKE KVFNIRFTAA AIGQADLNKN EPWDLPKIAK MGEKEFYFFC QRDRKYPTGM RTNRATVSGY
101: WKATGKDKEI FRGKGCLVGM KKTLVFYTGR APKGEKTNWV MHEYRLDGKY SYHNLPKTAR DEWVVCRVFH KNAPSTTITT TKQLSRIDSL DNIDHLLDFS
201: SLPPLIDPGF LGQPGPSFSG ARQQHDLKPV LHHPTTAPVD NTYLPTQALN FPYHSVHNSG SDFGYGAGSG NNNKGMIKLE HSLVSVSQET GLSSDVNTTA
301: TPEISSYPMM MNPAMMDGSK SACDGLDDLI FWEDLYTS
101: WKATGKDKEI FRGKGCLVGM KKTLVFYTGR APKGEKTNWV MHEYRLDGKY SYHNLPKTAR DEWVVCRVFH KNAPSTTITT TKQLSRIDSL DNIDHLLDFS
201: SLPPLIDPGF LGQPGPSFSG ARQQHDLKPV LHHPTTAPVD NTYLPTQALN FPYHSVHNSG SDFGYGAGSG NNNKGMIKLE HSLVSVSQET GLSSDVNTTA
301: TPEISSYPMM MNPAMMDGSK SACDGLDDLI FWEDLYTS
Arabidopsis Description
anac046NAC domain-containing protein 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SQQ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.