Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU0Hr1G014460.1 | |
| HORVU1Hr1G050960.7 | |
| HORVU5Hr1G124010.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G04060.1 | HORVU0Hr1G014460.1 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | HORVU1Hr1G050960.7 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | HORVU5Hr1G124010.1 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G100300.1 | Wheat | nucleus | 76.3 | 81.73 |
| TraesCS7D01G196300.1 | Wheat | cytosol, nucleus, peroxisome | 82.37 | 81.66 |
| TraesCS7A01G194700.1 | Wheat | nucleus | 81.79 | 81.09 |
| HORVU4Hr1G089450.1 | Barley | cytosol, mitochondrion, nucleus, peroxisome | 72.25 | 71.43 |
| HORVU7Hr1G031260.1 | Barley | nucleus | 66.47 | 64.97 |
| HORVU3Hr1G014100.1 | Barley | cytosol, nucleus | 65.9 | 60.48 |
| HORVU7Hr1G122680.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 60.98 | 57.03 |
| CDY29982 | Canola | cytosol | 26.59 | 53.49 |
| HORVU3Hr1G014090.1 | Barley | nucleus | 33.53 | 53.46 |
| EES02626 | Sorghum | cytosol | 21.68 | 52.45 |
| GSMUA_Achr10P... | Banana | cytosol | 30.35 | 46.05 |
| GSMUA_Achr5P07600_001 | Banana | cytosol | 32.66 | 45.94 |
| HORVU2Hr1G017380.1 | Barley | cytosol, nucleus, plastid | 27.75 | 40.85 |
| HORVU2Hr1G017360.1 | Barley | nucleus | 17.92 | 40.79 |
| Os01t0104500-01 | Rice | cytosol, mitochondrion, nucleus | 37.28 | 40.31 |
| GSMUA_Achr9P16920_001 | Banana | cytosol | 35.26 | 39.87 |
| GSMUA_Achr7P18330_001 | Banana | nucleus | 35.26 | 39.61 |
| Os01t0393100-01 | Rice | nucleus | 36.42 | 38.41 |
| GSMUA_Achr6P08600_001 | Banana | nucleus | 37.86 | 37.75 |
| GSMUA_Achr3P09520_001 | Banana | cytosol | 34.68 | 37.74 |
| HORVU4Hr1G012030.1 | Barley | cytosol, mitochondrion, nucleus | 31.79 | 36.79 |
| HORVU4Hr1G051360.3 | Barley | nucleus | 36.71 | 36.71 |
| GSMUA_Achr6P32290_001 | Banana | nucleus | 36.42 | 36.42 |
| GSMUA_Achr3P18020_001 | Banana | nucleus | 30.35 | 35.84 |
| CDY02636 | Canola | nucleus | 34.1 | 35.01 |
| CDY53250 | Canola | nucleus | 33.81 | 34.82 |
| Bra023669.1-P | Field mustard | nucleus | 33.81 | 34.82 |
| AT5G18270.1 | Thale cress | nucleus | 33.53 | 34.63 |
| Bra002148.1-P | Field mustard | nucleus | 32.95 | 33.93 |
| CDX70804 | Canola | nucleus | 32.95 | 33.83 |
| Bra006449.1-P | Field mustard | nucleus | 32.66 | 33.63 |
| CDY51238 | Canola | nucleus | 32.66 | 33.53 |
| AT3G04060.1 | Thale cress | nucleus | 32.37 | 33.14 |
| HORVU5Hr1G074810.1 | Barley | nucleus | 34.68 | 33.06 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 32.66 | 32.94 |
| Bra031950.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 32.66 | 32.85 |
| CDY42901 | Canola | nucleus | 32.37 | 32.56 |
| Bra040153.1-P | Field mustard | nucleus | 32.08 | 32.36 |
| EES02651 | Sorghum | nucleus | 36.71 | 31.75 |
| Zm00001d040189_P002 | Maize | mitochondrion, nucleus, peroxisome | 35.84 | 31.71 |
| KRG94783 | Soybean | nucleus | 36.99 | 31.6 |
| OQU89451 | Sorghum | cytosol | 33.53 | 31.18 |
| VIT_08s0007g07640.t01 | Wine grape | nucleus | 35.84 | 30.77 |
| KXG28945 | Sorghum | cytoskeleton, nucleus, peroxisome | 32.95 | 30.73 |
| KRH06738 | Soybean | nucleus | 36.13 | 30.71 |
| HORVU7Hr1G106480.1 | Barley | nucleus | 26.59 | 29.97 |
| EES17917 | Sorghum | cytosol | 34.68 | 29.85 |
| Zm00001d008403_P001 | Maize | plastid | 27.46 | 29.5 |
| HORVU2Hr1G103930.1 | Barley | mitochondrion | 25.14 | 29.49 |
| HORVU2Hr1G089210.4 | Barley | cytosol, mitochondrion, nucleus | 23.99 | 29.43 |
| KRH08479 | Soybean | nucleus | 34.39 | 29.02 |
| KRH70130 | Soybean | nucleus | 33.81 | 28.54 |
| HORVU2Hr1G017400.3 | Barley | nucleus | 31.5 | 28.46 |
| HORVU0Hr1G017490.7 | Barley | nucleus | 25.14 | 27.97 |
| HORVU2Hr1G080460.8 | Barley | plastid | 32.66 | 27.63 |
| HORVU2Hr1G017350.1 | Barley | nucleus | 30.64 | 26.7 |
| HORVU7Hr1G072670.3 | Barley | cytosol, plastid | 25.72 | 26.1 |
| HORVU7Hr1G082420.2 | Barley | nucleus | 28.9 | 25.51 |
| HORVU5Hr1G045640.7 | Barley | mitochondrion | 33.53 | 25.49 |
| HORVU7Hr1G106660.9 | Barley | nucleus, plastid | 26.59 | 25.34 |
| GSMUA_Achr8P21470_001 | Banana | nucleus | 36.99 | 24.81 |
| HORVU2Hr1G017370.1 | Barley | cytosol, nucleus, plastid | 30.35 | 24.71 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EMBL:FR821740 | UniProt:G2ZH11 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:HORVU7Hr1G039700 | EnsemblPlants:HORVU7Hr1G039700.1 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF23 | SUPFAM:SSF101941 |
| UniParc:UPI00022902CA | SEG:seg | : | : | : | : |
Description
NAC transcription factor [Source:UniProtKB/TrEMBL;Acc:G2ZH11]
Coordinates
chrchr7H:+:105614119..105615560
Molecular Weight (calculated)
38949.4 Da
IEP (calculated)
7.241
GRAVY (calculated)
-0.521
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVHLQAQEQ QQHHLNLPQG FRFHPTDMEI ITFYLVPKVL KKPFDTMVIE EVDLNKCEPW DLPNQVNMGD MAQYFFSRKD LKYPTGVRTN RATNAGYWKA
101: TGKDKEIFHP PTRSLIGMKK TLVFYKGRAP RGEKTNWIMH EYRLETGKKP TPGLPTDIAR ATTINASSKE EYVVCRIFHK STGLKKVRMP SYVMSMGAEQ
201: QHDFFESNTF APLMNYSTSS SSPLPPLSEG SLYQMHNIGV GSSMMGSDVL PMMNNHYFEN HHHQMLVAPP QSSISFYNNN QQQQMMHISA DQGFIVGVDA
301: GSGTSSIVSQ EDVVTGVNNN IQGNGGATTS SEISSVNMGM DDMWNY
101: TGKDKEIFHP PTRSLIGMKK TLVFYKGRAP RGEKTNWIMH EYRLETGKKP TPGLPTDIAR ATTINASSKE EYVVCRIFHK STGLKKVRMP SYVMSMGAEQ
201: QHDFFESNTF APLMNYSTSS SSPLPPLSEG SLYQMHNIGV GSSMMGSDVL PMMNNHYFEN HHHQMLVAPP QSSISFYNNN QQQQMMHISA DQGFIVGVDA
301: GSGTSSIVSQ EDVVTGVNNN IQGNGGATTS SEISSVNMGM DDMWNY
001: MEENLPPGFR FHPTDEELIT HYLCRKVSDI GFTGKAVVDV DLNKCEPWDL PAKASMGEKE WYFFSQRDRK YPTGLRTNRA TEAGYWKTTG KDKEIYRSGV
101: LVGMKKTLVF YKGRAPKGEK SNWVMHEYRL ESKQPFNPTN KEEWVVCRVF EKSTAAKKAQ EQQPQSSQPS FGSPCDANSS MANEFEDIDE LPNLNSNSST
201: IDYNNHIHQY SQRNVYSEDN TTSTAGLNMN MNMASTNLQS WTTSLLGPPL SPINSLLLKA FQIRNSYSFP KEMIPSFNHS SLQQGVSNMI QNASSSSQVQ
301: PQPQEEAFNM DSIW
101: LVGMKKTLVF YKGRAPKGEK SNWVMHEYRL ESKQPFNPTN KEEWVVCRVF EKSTAAKKAQ EQQPQSSQPS FGSPCDANSS MANEFEDIDE LPNLNSNSST
201: IDYNNHIHQY SQRNVYSEDN TTSTAGLNMN MNMASTNLQS WTTSLLGPPL SPINSLLLKA FQIRNSYSFP KEMIPSFNHS SLQQGVSNMI QNASSSSQVQ
301: PQPQEEAFNM DSIW
Arabidopsis Description
anac058NAC domain containing protein 58 [Source:UniProtKB/TrEMBL;Acc:Q9LS50]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.