Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29982 | Canola | cytosol | 21.12 | 63.37 |
| GSMUA_Achr5P07600_001 | Banana | cytosol | 29.65 | 62.2 |
| EES02626 | Sorghum | cytosol | 15.12 | 54.55 |
| GSMUA_Achr10P... | Banana | cytosol | 24.03 | 54.39 |
| TraesCS3B01G092800.1 | Wheat | cytosol | 21.9 | 53.05 |
| GSMUA_Achr9P00570_001 | Banana | nucleus | 17.25 | 52.98 |
| TraesCS3A01G077900.1 | Wheat | nucleus | 21.71 | 52.34 |
| HORVU3Hr1G014090.1 | Barley | nucleus | 21.32 | 50.69 |
| HORVU2Hr1G017360.1 | Barley | nucleus | 14.92 | 50.66 |
| GSMUA_Achr9P16920_001 | Banana | cytosol | 29.84 | 50.33 |
| HORVU2Hr1G017380.1 | Barley | cytosol, nucleus, plastid | 22.87 | 50.21 |
| GSMUA_Achr6P01770_001 | Banana | cytosol, mitochondrion, nucleus | 21.9 | 48.92 |
| TraesCS3D01G078500.1 | Wheat | nucleus | 21.32 | 48.89 |
| GSMUA_Achr7P18330_001 | Banana | nucleus | 28.68 | 48.05 |
| GSMUA_Achr3P09520_001 | Banana | cytosol | 29.26 | 47.48 |
| GSMUA_Achr3P18020_001 | Banana | nucleus | 26.16 | 46.08 |
| GSMUA_Achr6P08600_001 | Banana | nucleus | 30.81 | 45.82 |
| TraesCS7B01G094000.1 | Wheat | nucleus | 24.03 | 45.42 |
| TraesCS2A01G101200.1 | Wheat | nucleus | 24.22 | 45.29 |
| TraesCS2D01G100800.1 | Wheat | nucleus | 24.22 | 45.29 |
| GSMUA_Achr9P27530_001 | Banana | nucleus | 28.29 | 43.98 |
| GSMUA_Achr6P32290_001 | Banana | nucleus | 29.46 | 43.93 |
| AT5G18270.1 | Thale cress | nucleus | 28.29 | 43.58 |
| Os07t0684800-01 | Rice | cytosol | 25.39 | 43.52 |
| GSMUA_Achr6P30570_001 | Banana | cytosol, nucleus, plastid | 27.33 | 43.38 |
| Bra002148.1-P | Field mustard | nucleus | 28.1 | 43.15 |
| GSMUA_Achr8P18420_001 | Banana | nucleus | 24.03 | 43.06 |
| CDY02636 | Canola | nucleus | 28.1 | 43.03 |
| Bra023669.1-P | Field mustard | nucleus | 27.91 | 42.86 |
| CDY53250 | Canola | nucleus | 27.91 | 42.86 |
| TraesCS4B01G174000.1 | Wheat | cytosol | 28.29 | 42.82 |
| TraesCS4D01G176000.1 | Wheat | nucleus | 28.29 | 42.69 |
| GSMUA_Achr9P10210_001 | Banana | nucleus | 19.77 | 42.32 |
| Os01t0104500-01 | Rice | cytosol, mitochondrion, nucleus | 26.16 | 42.19 |
| CDX70804 | Canola | nucleus | 27.52 | 42.14 |
| TraesCS4A01G130600.1 | Wheat | nucleus | 27.91 | 42.11 |
| GSMUA_Achr10P... | Banana | nucleus | 26.74 | 42.07 |
| AT3G04060.1 | Thale cress | nucleus | 27.52 | 42.01 |
| Bra006449.1-P | Field mustard | nucleus | 27.33 | 41.96 |
| CDY51238 | Canola | nucleus | 27.33 | 41.84 |
| EER97754 | Sorghum | nucleus | 26.94 | 41.74 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 27.71 | 41.69 |
| Bra031950.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 27.71 | 41.57 |
| Os01t0393100-01 | Rice | nucleus | 26.36 | 41.46 |
| HORVU4Hr1G051360.3 | Barley | nucleus | 27.71 | 41.33 |
| GSMUA_Achr10P... | Banana | nucleus | 26.36 | 40.96 |
| Zm00001d022517_P001 | Maize | nucleus | 25.19 | 40.88 |
| TraesCS2D01G100900.1 | Wheat | nucleus | 27.91 | 40.79 |
| GSMUA_Achr3P23360_001 | Banana | nucleus | 22.09 | 40.71 |
| TraesCS2B01G118500.1 | Wheat | cytosol | 27.52 | 40.34 |
| TraesCS7D01G189900.1 | Wheat | nucleus | 25.19 | 40.25 |
| GSMUA_Achr10P... | Banana | cytosol | 27.52 | 40.0 |
| TraesCS7B01G100300.1 | Wheat | nucleus | 25.0 | 39.94 |
| CDY42901 | Canola | nucleus | 26.55 | 39.83 |
| Zm00001d005028_P001 | Maize | cytosol | 24.81 | 39.75 |
| Zm00001d047554_P001 | Maize | cytoskeleton, cytosol, nucleus | 26.74 | 39.66 |
| TraesCS7A01G152500.1 | Wheat | nucleus | 27.33 | 39.61 |
| TraesCS7D01G154200.1 | Wheat | nucleus | 27.33 | 39.61 |
| KRG94783 | Soybean | nucleus | 31.01 | 39.51 |
| GSMUA_Achr5P00500_001 | Banana | nucleus | 20.93 | 39.42 |
| TraesCS2A01G101400.1 | Wheat | cytosol | 26.94 | 39.38 |
| TraesCS2A01G101100.1 | Wheat | cytosol, nucleus, plastid | 26.55 | 39.37 |
| Bra040153.1-P | Field mustard | nucleus | 26.16 | 39.36 |
| HORVU7Hr1G031260.1 | Barley | nucleus | 26.94 | 39.27 |
| GSMUA_Achr7P19680_001 | Banana | cytosol, mitochondrion, nucleus | 24.81 | 39.14 |
| TraesCS2B01G118200.1 | Wheat | cytosol, nucleus, plastid | 26.55 | 39.03 |
| GSMUA_Achr6P30050_001 | Banana | nucleus | 21.51 | 38.95 |
| TraesCS7B01G489500.2 | Wheat | cytosol | 26.16 | 38.9 |
| KRH06738 | Soybean | nucleus | 30.62 | 38.82 |
| EER92328 | Sorghum | cytosol | 26.74 | 38.76 |
| Zm00001d028995_P001 | Maize | cytosol | 26.36 | 38.75 |
| Os03t0327100-01 | Rice | nucleus | 26.74 | 38.55 |
| TraesCS7D01G543400.1 | Wheat | nucleus | 25.39 | 38.53 |
| GSMUA_Achr5P18670_001 | Banana | nucleus | 20.35 | 38.46 |
| TraesCS2B01G118400.1 | Wheat | cytosol, nucleus, plastid | 26.16 | 38.46 |
| VIT_08s0007g07640.t01 | Wine grape | nucleus | 30.04 | 38.46 |
| TraesCS5A01G245900.2 | Wheat | nucleus | 24.42 | 38.41 |
| TraesCS7B01G056300.1 | Wheat | nucleus | 26.55 | 38.38 |
| GSMUA_Achr11P... | Banana | nucleus | 20.74 | 38.35 |
| GSMUA_Achr8P33310_001 | Banana | nucleus | 20.93 | 38.16 |
| TraesCS2D01G100600.1 | Wheat | cytosol, nucleus, plastid | 27.13 | 38.04 |
| GSMUA_Achr6P31350_001 | Banana | nucleus | 21.9 | 37.92 |
| GSMUA_Achr11P... | Banana | nucleus | 19.19 | 37.79 |
| GSMUA_Achr8P24680_001 | Banana | cytosol | 23.06 | 37.54 |
| TraesCS7A01G194700.1 | Wheat | nucleus | 25.39 | 37.54 |
| TraesCS7D01G196300.1 | Wheat | cytosol, nucleus, peroxisome | 25.39 | 37.54 |
| GSMUA_Achr5P26640_001 | Banana | nucleus | 21.71 | 37.46 |
| HORVU7Hr1G039700.1 | Barley | nucleus | 24.81 | 36.99 |
| TraesCS7A01G569300.1 | Wheat | cytosol | 25.78 | 36.74 |
| TraesCS7A01G189200.1 | Wheat | nucleus | 24.81 | 36.68 |
| HORVU2Hr1G017400.3 | Barley | nucleus | 27.13 | 36.55 |
| GSMUA_Achr9P26140_001 | Banana | cytosol | 22.29 | 36.51 |
| TraesCS3B01G092900.3 | Wheat | nucleus | 25.19 | 36.41 |
| TraesCS2A01G101000.1 | Wheat | cytosol, nucleus, plastid | 26.94 | 36.39 |
| HORVU4Hr1G089450.1 | Barley | cytosol, mitochondrion, nucleus, peroxisome | 24.61 | 36.29 |
| GSMUA_Achr7P11500_001 | Banana | nucleus | 23.84 | 36.18 |
| TraesCS7D01G543500.2 | Wheat | endoplasmic reticulum | 26.55 | 36.05 |
| GSMUA_Achr9P20090_001 | Banana | cytosol | 22.09 | 35.96 |
| TraesCS5B01G243300.1 | Wheat | nucleus | 18.6 | 35.82 |
| HORVU2Hr1G017350.1 | Barley | nucleus | 27.52 | 35.77 |
| Os12t0123800-01 | Rice | nucleus | 27.33 | 35.61 |
| TraesCS7A01G569100.1 | Wheat | nucleus | 26.16 | 35.53 |
| GSMUA_AchrUn_... | Banana | nucleus | 17.64 | 35.41 |
| KRH08479 | Soybean | nucleus | 28.1 | 35.37 |
| GSMUA_Achr8P07120_001 | Banana | nucleus | 20.54 | 35.22 |
| HORVU7Hr1G122680.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 25.19 | 35.14 |
| KRH70130 | Soybean | nucleus | 27.71 | 34.88 |
| GSMUA_Achr1P20530_001 | Banana | cytosol, nucleus, plastid | 18.6 | 34.66 |
| GSMUA_Achr11P... | Banana | nucleus | 18.6 | 34.53 |
| GSMUA_Achr6P36550_001 | Banana | nucleus | 18.6 | 34.53 |
| EES07908 | Sorghum | nucleus, peroxisome, plastid | 26.55 | 34.51 |
| Zm00001d052390_P001 | Maize | nucleus | 24.81 | 34.5 |
| GSMUA_Achr8P18980_001 | Banana | nucleus | 18.22 | 34.43 |
| HORVU2Hr1G017370.1 | Barley | cytosol, nucleus, plastid | 28.29 | 34.35 |
| HORVU3Hr1G014100.1 | Barley | cytosol, nucleus | 25.0 | 34.22 |
| KXG28945 | Sorghum | cytoskeleton, nucleus, peroxisome | 24.22 | 33.69 |
| Zm00001d040189_P002 | Maize | mitochondrion, nucleus, peroxisome | 25.39 | 33.5 |
| TraesCS2B01G118300.1 | Wheat | cytosol | 25.0 | 33.25 |
| Zm00001d008403_P001 | Maize | plastid | 20.74 | 33.23 |
| GSMUA_AchrUn_... | Banana | nucleus | 18.6 | 33.1 |
| TraesCS5A01G143100.1 | Wheat | nucleus | 25.39 | 32.51 |
| OQU89451 | Sorghum | cytosol | 23.26 | 32.26 |
| TraesCS5B01G141900.1 | Wheat | nucleus | 25.0 | 32.17 |
| EES17917 | Sorghum | cytosol | 25.0 | 32.09 |
| TraesCS5D01G148900.1 | Wheat | nucleus | 25.0 | 32.09 |
| TraesCS2D01G100700.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 26.55 | 32.08 |
| GSMUA_Achr1P10860_001 | Banana | nucleus | 17.83 | 31.62 |
| EES02651 | Sorghum | nucleus | 24.42 | 31.5 |
| Os11t0127000-01 | Rice | nucleus | 17.83 | 31.19 |
| HORVU5Hr1G045640.7 | Barley | mitochondrion | 25.0 | 28.35 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | Gene3D:3.30.420.10 | InterPro:Exonuclease_RNaseT/DNA_pol3 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr8G21470_001 | EnsemblPlants:GSMUA_Achr8P21470_001 | EnsemblPlants:GSMUA_Achr8T21470_001 | InterPro:IPR003441 | InterPro:IPR036093 |
| InterPro:IPR036397 | UniProt:M0TSF0 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF00929 | PFAM:PF02365 |
| PFscan:PS51005 | PANTHER:PTHR30231 | PANTHER:PTHR30231:SF6 | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00479 |
| SUPFAM:SSF101941 | SUPFAM:SSF53098 | UniParc:UPI000296BA34 | SEG:seg | : | : |
Description
Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G21470_001]
Coordinates
chr8:-:26355888..26361636
Molecular Weight (calculated)
57518.4 Da
IEP (calculated)
8.680
GRAVY (calculated)
-0.348
Length
516 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDVSVLNDV DDCIDLPPGF RFHPTDEEII THYLTPKVTD LGFTAKAMGD VDLNKCEPWD LPGKAKMGEK DLYFFCHKDR KYPTGMRTNR ATEAGYWKAT
101: GKDKEIYRDK GVLVGMKKTL VFYQGRAPKG QKTNWVMHEF RLEGKHSLPN LPNSAKDEWV VCRVFHKNIG LKKSPLGDDL MDLATLPPPF MDPPRMESNF
201: TGLPPGVEDP SAYCTLLGST DVGYLHQDEA MMRAFAAANN DVSAATRKPC KVEQFTDISS SAIRRQQIKM GEIVFFDVET TAPAGEGRRL QLLEFGAMLV
301: CPRKLTEVES YCTLIRPADL SAVATKRCSG ITREAVAAAP TFEEVADRIF GILNGTVWAG HNIQRFDCHR IKEAFADIGR PPPEPKGLID SLAILTHGFG
401: RRAGDLKMAT LASYFGLGQQ KHRSLDDVRM NLEVFKNCAT VLLLESSLPQ VFPNKSLGNL GMVTRSRANG RSCGVEACRK SPQPASPVIH RASPYKKDNI
501: RKVNQFVMRP YLHFTI
101: GKDKEIYRDK GVLVGMKKTL VFYQGRAPKG QKTNWVMHEF RLEGKHSLPN LPNSAKDEWV VCRVFHKNIG LKKSPLGDDL MDLATLPPPF MDPPRMESNF
201: TGLPPGVEDP SAYCTLLGST DVGYLHQDEA MMRAFAAANN DVSAATRKPC KVEQFTDISS SAIRRQQIKM GEIVFFDVET TAPAGEGRRL QLLEFGAMLV
301: CPRKLTEVES YCTLIRPADL SAVATKRCSG ITREAVAAAP TFEEVADRIF GILNGTVWAG HNIQRFDCHR IKEAFADIGR PPPEPKGLID SLAILTHGFG
401: RRAGDLKMAT LASYFGLGQQ KHRSLDDVRM NLEVFKNCAT VLLLESSLPQ VFPNKSLGNL GMVTRSRANG RSCGVEACRK SPQPASPVIH RASPYKKDNI
501: RKVNQFVMRP YLHFTI
001: METFGVFHKE DDEQMDLPPG FRFHPTDEEL ITHYLHKKVL DLGFSAKAIG EVDLNKAEPW ELPYKAKIGE KEWYFFCVRD RKYPTGLRTN RATQAGYWKA
101: TGKDKEIFRG KSLVGMKKTL VFYRGRAPKG QKTNWVMHEY RLDGKLSAHN LPKTAKNEWV ICRVFHKTAG GKKIPISTLI RIGSYGTGSS LPPLTDSSPY
201: NDKTKTEPVY VPCFSNQAET RGTILNCFSN PSLSSIQPDF LQMIPLYQPQ SLNISESSNP VLTQEQSVLQ AMMENNRRQN FKTLSISQET GVSNTDNSSV
301: FEFGRKRFDH QEVPSPSSGP VDLEPFWNY
101: TGKDKEIFRG KSLVGMKKTL VFYRGRAPKG QKTNWVMHEY RLDGKLSAHN LPKTAKNEWV ICRVFHKTAG GKKIPISTLI RIGSYGTGSS LPPLTDSSPY
201: NDKTKTEPVY VPCFSNQAET RGTILNCFSN PSLSSIQPDF LQMIPLYQPQ SLNISESSNP VLTQEQSVLQ AMMENNRRQN FKTLSISQET GVSNTDNSSV
301: FEFGRKRFDH QEVPSPSSGP VDLEPFWNY
Arabidopsis Description
NAC079NAC4 [Source:UniProtKB/TrEMBL;Acc:A0A178UL34]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.