Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU0Hr1G014460.1 | |
| HORVU1Hr1G050960.7 | |
| HORVU5Hr1G124010.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G04060.1 | HORVU0Hr1G014460.1 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | HORVU1Hr1G050960.7 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | HORVU5Hr1G124010.1 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G148900.1 | Wheat | nucleus | 83.08 | 94.03 |
| TraesCS5A01G143100.1 | Wheat | nucleus | 82.2 | 92.8 |
| TraesCS5B01G141900.1 | Wheat | nucleus | 81.32 | 92.27 |
| Zm00001d005028_P001 | Maize | cytosol | 36.92 | 52.17 |
| CDY29982 | Canola | cytosol | 19.56 | 51.74 |
| Os12t0123800-01 | Rice | nucleus | 41.32 | 47.47 |
| EES07908 | Sorghum | nucleus, peroxisome, plastid | 41.1 | 47.1 |
| HORVU2Hr1G017360.1 | Barley | nucleus | 15.6 | 46.71 |
| HORVU3Hr1G014090.1 | Barley | nucleus | 21.98 | 46.08 |
| GSMUA_Achr10P... | Banana | cytosol | 23.08 | 46.05 |
| Zm00001d052390_P001 | Maize | nucleus | 36.92 | 45.28 |
| GSMUA_Achr5P07600_001 | Banana | cytosol | 24.18 | 44.72 |
| HORVU2Hr1G017380.1 | Barley | cytosol, nucleus, plastid | 21.76 | 42.13 |
| GSMUA_Achr7P18330_001 | Banana | nucleus | 28.13 | 41.56 |
| Os11t0127000-01 | Rice | nucleus | 25.93 | 40.0 |
| GSMUA_Achr9P16920_001 | Banana | cytosol | 26.15 | 38.89 |
| GSMUA_Achr3P18020_001 | Banana | nucleus | 24.84 | 38.57 |
| HORVU4Hr1G012030.1 | Barley | cytosol, mitochondrion, nucleus | 24.62 | 37.46 |
| HORVU4Hr1G051360.3 | Barley | nucleus | 28.13 | 36.99 |
| GSMUA_Achr6P32290_001 | Banana | nucleus | 27.47 | 36.13 |
| AT5G18270.1 | Thale cress | nucleus | 26.59 | 36.12 |
| GSMUA_Achr6P08600_001 | Banana | nucleus | 27.25 | 35.73 |
| CDY53250 | Canola | nucleus | 26.37 | 35.71 |
| Bra023669.1-P | Field mustard | nucleus | 26.37 | 35.71 |
| CDY02636 | Canola | nucleus | 26.37 | 35.61 |
| GSMUA_Achr3P09520_001 | Banana | cytosol | 24.84 | 35.53 |
| Bra002148.1-P | Field mustard | nucleus | 26.15 | 35.42 |
| CDX70804 | Canola | nucleus | 25.93 | 35.01 |
| Bra006449.1-P | Field mustard | nucleus | 25.71 | 34.82 |
| CDY51238 | Canola | nucleus | 25.71 | 34.72 |
| AT3G04060.1 | Thale cress | nucleus | 25.71 | 34.62 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 25.93 | 34.4 |
| Bra031950.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 25.93 | 34.3 |
| HORVU5Hr1G074810.1 | Barley | nucleus | 26.81 | 33.61 |
| HORVU7Hr1G039700.1 | Barley | nucleus | 25.49 | 33.53 |
| CDY42901 | Canola | nucleus | 25.27 | 33.43 |
| HORVU7Hr1G031260.1 | Barley | nucleus | 25.93 | 33.33 |
| HORVU7Hr1G106480.1 | Barley | nucleus | 22.42 | 33.22 |
| Bra040153.1-P | Field mustard | nucleus | 24.84 | 32.94 |
| HORVU4Hr1G089450.1 | Barley | cytosol, mitochondrion, nucleus, peroxisome | 25.27 | 32.86 |
| KRG94783 | Soybean | nucleus | 29.01 | 32.59 |
| VIT_08s0007g07640.t01 | Wine grape | nucleus | 28.79 | 32.51 |
| HORVU2Hr1G089210.4 | Barley | cytosol, mitochondrion, nucleus | 20.0 | 32.27 |
| KRH06738 | Soybean | nucleus | 28.79 | 32.19 |
| HORVU2Hr1G103930.1 | Barley | mitochondrion | 20.44 | 31.53 |
| HORVU7Hr1G122680.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 25.49 | 31.35 |
| HORVU7Hr1G082420.2 | Barley | nucleus | 26.37 | 30.61 |
| KRH70130 | Soybean | nucleus | 27.25 | 30.24 |
| HORVU3Hr1G014100.1 | Barley | cytosol, nucleus | 25.05 | 30.24 |
| KRH08479 | Soybean | nucleus | 26.81 | 29.76 |
| HORVU2Hr1G017400.3 | Barley | nucleus | 24.84 | 29.5 |
| HORVU7Hr1G072670.3 | Barley | cytosol, plastid | 21.32 | 28.45 |
| HORVU2Hr1G080460.8 | Barley | plastid | 25.49 | 28.36 |
| HORVU2Hr1G017350.1 | Barley | nucleus | 24.62 | 28.21 |
| HORVU7Hr1G106660.9 | Barley | nucleus, plastid | 22.2 | 27.82 |
| HORVU0Hr1G017490.7 | Barley | nucleus | 18.68 | 27.33 |
| HORVU2Hr1G017370.1 | Barley | cytosol, nucleus, plastid | 25.05 | 26.82 |
| GSMUA_Achr8P21470_001 | Banana | nucleus | 28.35 | 25.0 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | UniProt:A0A287R171 | EMBL:AK371156 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:HORVU5Hr1G045640 | EnsemblPlants:HORVU5Hr1G045640.7 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF23 | SUPFAM:SSF101941 |
| UniParc:UPI000B475B19 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:-:352903740..352905508
Molecular Weight (calculated)
49186.6 Da
IEP (calculated)
7.455
GRAVY (calculated)
-0.484
Length
455 amino acids
Sequence
(BLAST)
(BLAST)
001: SVRARAFFLC APKQKPPSSS ILDRPVSLPA GYCFSLVIAC LVGREGRRAS MVESIAAGAG SEEQGRGGGL SLPPGFRFHP TDEEIITCYL LRKFLDPSFV
101: SRAVGEVDLN SCEPRDLPGK ANMGEKEWYF FVHKDLKYPT GSRANRATKE GYWKATGKDR EIFKPRAREL VGMKKTLVFY TGRAPRGAKS EWVMHEFRLQ
201: GKSRDQTMNN PKDEWVVCKV FNKKGEAKAA RDADVDAEYS AVTTPNASSV VDAGEGAGDF TDSMFTIDPL YIPNSDEYTS NQLPAETTTT TNTNGDPPPY
301: NADYYYPSVP TTAGSFNVMS NYSLTNAPSN AQTATAMASS VPATSGSSWQ HMLMNTAPHG GMVMGRRSYD VNLHEQQAIM VRALGGAVGA QNFGEPANGL
401: QLPSSAVTTG NVLPQQGKLG SYDDGGEFPY GNYDLASAAM NGRPAAANNP GARFY
101: SRAVGEVDLN SCEPRDLPGK ANMGEKEWYF FVHKDLKYPT GSRANRATKE GYWKATGKDR EIFKPRAREL VGMKKTLVFY TGRAPRGAKS EWVMHEFRLQ
201: GKSRDQTMNN PKDEWVVCKV FNKKGEAKAA RDADVDAEYS AVTTPNASSV VDAGEGAGDF TDSMFTIDPL YIPNSDEYTS NQLPAETTTT TNTNGDPPPY
301: NADYYYPSVP TTAGSFNVMS NYSLTNAPSN AQTATAMASS VPATSGSSWQ HMLMNTAPHG GMVMGRRSYD VNLHEQQAIM VRALGGAVGA QNFGEPANGL
401: QLPSSAVTTG NVLPQQGKLG SYDDGGEFPY GNYDLASAAM NGRPAAANNP GARFY
001: MEENLPPGFR FHPTDEELIT HYLCRKVSDI GFTGKAVVDV DLNKCEPWDL PAKASMGEKE WYFFSQRDRK YPTGLRTNRA TEAGYWKTTG KDKEIYRSGV
101: LVGMKKTLVF YKGRAPKGEK SNWVMHEYRL ESKQPFNPTN KEEWVVCRVF EKSTAAKKAQ EQQPQSSQPS FGSPCDANSS MANEFEDIDE LPNLNSNSST
201: IDYNNHIHQY SQRNVYSEDN TTSTAGLNMN MNMASTNLQS WTTSLLGPPL SPINSLLLKA FQIRNSYSFP KEMIPSFNHS SLQQGVSNMI QNASSSSQVQ
301: PQPQEEAFNM DSIW
101: LVGMKKTLVF YKGRAPKGEK SNWVMHEYRL ESKQPFNPTN KEEWVVCRVF EKSTAAKKAQ EQQPQSSQPS FGSPCDANSS MANEFEDIDE LPNLNSNSST
201: IDYNNHIHQY SQRNVYSEDN TTSTAGLNMN MNMASTNLQS WTTSLLGPPL SPINSLLLKA FQIRNSYSFP KEMIPSFNHS SLQQGVSNMI QNASSSSQVQ
301: PQPQEEAFNM DSIW
Arabidopsis Description
anac058NAC domain containing protein 58 [Source:UniProtKB/TrEMBL;Acc:Q9LS50]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.