Factsheet for HORVU2Hr1G089210.4

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G382400.1	Wheat	nucleus	88.3	80.32
TraesCS2B01G399700.1	Wheat	cytosol, mitochondrion, nucleus	86.52	79.48
TraesCS2D01G378800.1	Wheat	cytosol, endoplasmic reticulum, nucleus	86.17	77.14
Os04t0515900-01	Rice	nucleus	72.69	73.74
CDY51707	Canola	cytosol	37.59	67.09
Zm00001d003052_P001	Maize	cytosol, mitochondrion, nucleus	69.86	66.33
KXG26719	Sorghum	nucleus	67.73	65.86
CDX92881	Canola	cytosol	37.23	64.42
Zm00001d025861_P001	Maize	cytosol, nucleus, plastid	66.31	63.82
GSMUA_Achr5P18670_001	Banana	nucleus	59.57	61.54
GSMUA_Achr11P...	Banana	nucleus	54.61	58.78
GSMUA_Achr11P...	Banana	nucleus	55.67	56.47
GSMUA_AchrUn_...	Banana	nucleus	57.45	55.86
GSMUA_Achr8P18980_001	Banana	nucleus	53.9	55.68
GSMUA_Achr1P10860_001	Banana	nucleus	54.96	53.26
GSMUA_AchrUn_...	Banana	nucleus	47.16	51.75
GSMUA_Achr6P36550_001	Banana	nucleus	50.71	51.44
GSMUA_Achr1P20530_001	Banana	cytosol, nucleus, plastid	49.29	50.18
Solyc09g025310.2.1	Tomato	nucleus	46.81	48.89
PGSC0003DMT400026644	Potato	cytosol, nucleus, peroxisome	46.45	47.29
HORVU0Hr1G017490.7	Barley	nucleus	51.42	46.62
Solyc06g008360.2.1	Tomato	nucleus	46.1	46.1
KRH32193	Soybean	cytosol, nucleus, plastid	48.23	45.95
PGSC0003DMT400065559	Potato	nucleus	45.39	45.39
KRH67403	Soybean	cytosol, nucleus, plastid	47.52	45.27
KRG95684	Soybean	cytosol, nucleus, peroxisome	47.16	45.24
PGSC0003DMT400051915	Potato	cytosol	45.04	44.72
VIT_07s0005g03610.t01	Wine grape	mitochondrion, nucleus	37.23	42.86
HORVU3Hr1G014090.1	Barley	nucleus	30.5	39.63
HORVU2Hr1G017380.1	Barley	cytosol, nucleus, plastid	31.91	38.3
CDY35197	Canola	nucleus	45.04	38.02
HORVU2Hr1G103930.1	Barley	mitochondrion	39.36	37.63
CDY38380	Canola	nucleus	45.39	37.21
Bra011037.1-P	Field mustard	nucleus	45.04	36.92
CDY14236	Canola	cytosol	43.62	36.61
AT4G28530.1	Thale cress	nucleus	45.39	36.36
CDX97445	Canola	cytosol	43.26	36.31
Bra010362.1-P	Field mustard	nucleus	44.33	36.02
Bra024194.1-P	Field mustard	nucleus	44.33	35.61
HORVU2Hr1G017360.1	Barley	nucleus	18.79	34.87
HORVU7Hr1G106480.1	Barley	nucleus	37.59	34.53
HORVU4Hr1G012030.1	Barley	cytosol, mitochondrion, nucleus	33.33	31.44
HORVU7Hr1G072670.3	Barley	cytosol, plastid	37.23	30.79
HORVU7Hr1G106660.9	Barley	nucleus, plastid	36.17	28.1
HORVU4Hr1G051360.3	Barley	nucleus	32.98	26.88
HORVU7Hr1G031260.1	Barley	nucleus	32.27	25.71
HORVU5Hr1G074810.1	Barley	nucleus	32.98	25.62
HORVU2Hr1G017400.3	Barley	nucleus	34.04	25.07
HORVU7Hr1G082420.2	Barley	nucleus	34.75	25.0
HORVU7Hr1G122680.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	32.27	24.59
HORVU7Hr1G039700.1	Barley	nucleus	29.43	23.99
HORVU2Hr1G080460.8	Barley	plastid	34.75	23.96
HORVU3Hr1G014100.1	Barley	cytosol, nucleus	31.91	23.87
HORVU2Hr1G017350.1	Barley	nucleus	33.33	23.68
HORVU4Hr1G089450.1	Barley	cytosol, mitochondrion, nucleus, peroxisome	29.08	23.43
HORVU2Hr1G017370.1	Barley	cytosol, nucleus, plastid	32.98	21.88
HORVU5Hr1G045640.7	Barley	mitochondrion	32.27	20.0
CDX92880	Canola	nucleus	8.51	12.12
CDY51708	Canola	nucleus	8.51	12.06

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU2Hr1G089210
EnsemblPlants:HORVU2Hr1G089210.4	InterPro:IPR003441	InterPro:IPR036093	UniProt:M0UN53	InterPro:NAC-dom	InterPro:NAC_dom_sf
PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31744	PANTHER:PTHR31744:SF4	SUPFAM:SSF101941	UniParc:UPI0002949389
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:637969080..637971373

Molecular Weight (calculated)

31596.1 Da

IEP (calculated)

6.365

GRAVY (calculated)

-0.623

Length

282 amino acids

Sequence
(BLAST)

001: MGLREIESTL PPGFRFYPSD QELVCHYLYK KVTNERASQG TLVEVDLHAR EPWELPDVAK LTASEWYFFS FRDRKYATGS RTNRATKTGY WKATGKDREV
101: RSPSTRAVVG MRKTLVFYQG RAPNGTKTSW VMHEFRLDSP HLPPREDWVL CRVFQKQKVD GDQDNARSSS PTFAGSSQPA PELPVMDAGN DHMTGFAPPR
201: QEEIMACGSN PLMNAAVWQQ YNSLLLDQYP QEETTAGGSP ALARGVTGDD CGFFFDSGFE DMAGLGQLGA MPMRFPQGQG WS

Best Arabidopsis Sequence Match ( AT4G28530.1 )
(BLAST)

001: MGLKDIGSKL PPGFRFHPSD EELVCHYLCN KIRAKSDHGD VDDDDDDVDE ALKGSTDLVE IDLHICEPWE LPDVAKLNAK EWYFFSFRDR KYATGYRTNR
101: ATVSGYWKAT GKDRTVMDPR TRQLVGMRKT LVFYRNRAPN GIKTTWIMHE FRLECPNIPP KEDWVLCRVF NKGRDSSLQD NNYYNNDNQT QRLEVNDAPD
201: LNYNNQLPPL LSSPPHNHQH EKMKIQVCDQ WEQLMKQPSR TTGHPYHHHC HHQTIACGWE QMMIGSLSSP SSHGPDHESL LNLLYVDNNN SVNISGDHHQ
301: NYEKILLSSL DMTSLDHDKT CMGSSSDGGM VSDLHMECGG LSFETENILA FQ

Arabidopsis Description

anac074At4g28530 [Source:UniProtKB/TrEMBL;Acc:Q8GUJ6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.