Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d003052_P001 | Maize | cytosol, mitochondrion, nucleus | 84.14 | 82.15 |
| Zm00001d025861_P001 | Maize | cytosol, nucleus, plastid | 78.62 | 77.82 |
| Os04t0515900-01 | Rice | nucleus | 68.97 | 71.94 |
| HORVU2Hr1G089210.4 | Barley | cytosol, mitochondrion, nucleus | 65.86 | 67.73 |
| CDY51707 | Canola | cytosol | 35.17 | 64.56 |
| TraesCS2A01G382400.1 | Wheat | nucleus | 67.59 | 63.23 |
| TraesCS2B01G399700.1 | Wheat | cytosol, mitochondrion, nucleus | 65.86 | 62.22 |
| CDX92881 | Canola | cytosol | 34.83 | 61.96 |
| GSMUA_Achr11P... | Banana | nucleus | 54.48 | 60.31 |
| TraesCS2D01G378800.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 64.83 | 59.68 |
| GSMUA_Achr5P18670_001 | Banana | nucleus | 55.17 | 58.61 |
| EES05451 | Sorghum | nucleus | 60.34 | 57.95 |
| GSMUA_AchrUn_... | Banana | nucleus | 56.55 | 56.55 |
| GSMUA_Achr11P... | Banana | nucleus | 53.1 | 55.4 |
| GSMUA_Achr8P18980_001 | Banana | nucleus | 51.72 | 54.95 |
| GSMUA_Achr1P10860_001 | Banana | nucleus | 53.1 | 52.92 |
| GSMUA_AchrUn_... | Banana | nucleus | 45.17 | 50.97 |
| GSMUA_Achr6P36550_001 | Banana | nucleus | 48.62 | 50.72 |
| GSMUA_Achr1P20530_001 | Banana | cytosol, nucleus, plastid | 46.9 | 49.1 |
| Solyc09g025310.2.1 | Tomato | nucleus | 42.76 | 45.93 |
| EES07725 | Sorghum | cytosol | 47.59 | 45.54 |
| PGSC0003DMT400026644 | Potato | cytosol, nucleus, peroxisome | 43.1 | 45.13 |
| EES02626 | Sorghum | cytosol | 21.72 | 44.06 |
| KRH32193 | Soybean | cytosol, nucleus, plastid | 44.83 | 43.92 |
| KRH67403 | Soybean | cytosol, nucleus, plastid | 44.14 | 43.24 |
| KRG95684 | Soybean | cytosol, nucleus, peroxisome | 43.79 | 43.2 |
| Solyc06g008360.2.1 | Tomato | nucleus | 41.72 | 42.91 |
| PGSC0003DMT400065559 | Potato | nucleus | 41.38 | 42.55 |
| PGSC0003DMT400051915 | Potato | cytosol | 41.03 | 41.9 |
| VIT_07s0005g03610.t01 | Wine grape | mitochondrion, nucleus | 35.17 | 41.63 |
| CDY14236 | Canola | cytosol | 42.07 | 36.31 |
| CDY35197 | Canola | nucleus | 41.72 | 36.23 |
| CDX97445 | Canola | cytosol | 41.72 | 36.01 |
| CDY38380 | Canola | nucleus | 42.41 | 35.76 |
| AT4G28530.1 | Thale cress | nucleus | 43.1 | 35.51 |
| Bra011037.1-P | Field mustard | nucleus | 41.72 | 35.17 |
| Bra010362.1-P | Field mustard | nucleus | 42.07 | 35.16 |
| Bra024194.1-P | Field mustard | nucleus | 42.07 | 34.76 |
| EER88807 | Sorghum | nucleus | 35.52 | 33.55 |
| EES13494 | Sorghum | cytosol, nucleus, plastid | 33.1 | 33.22 |
| OQU82346 | Sorghum | cytosol, nucleus, plastid | 34.83 | 32.69 |
| OQU79579 | Sorghum | cytosol, nucleus, peroxisome | 34.83 | 30.24 |
| EES14261 | Sorghum | nucleus | 33.79 | 28.74 |
| EER93792 | Sorghum | cytosol, mitochondrion, nucleus | 33.1 | 28.15 |
| EES10946 | Sorghum | cytosol, mitochondrion, nucleus | 33.45 | 27.25 |
| EER99125 | Sorghum | nucleus | 33.79 | 26.06 |
| EES05316 | Sorghum | nucleus | 32.41 | 25.97 |
| EER97754 | Sorghum | nucleus | 29.31 | 25.53 |
| OQU89451 | Sorghum | cytosol | 32.41 | 25.27 |
| EER92328 | Sorghum | cytosol | 30.69 | 25.0 |
| KXG28945 | Sorghum | cytoskeleton, nucleus, peroxisome | 31.38 | 24.53 |
| KXG28193 | Sorghum | cytosol | 23.45 | 24.29 |
| KXG23228 | Sorghum | plastid | 36.21 | 23.65 |
| EES17917 | Sorghum | cytosol | 32.76 | 23.63 |
| EES02651 | Sorghum | nucleus | 32.41 | 23.5 |
| EES07908 | Sorghum | nucleus, peroxisome, plastid | 30.34 | 22.17 |
| CDX92880 | Canola | nucleus | 9.31 | 13.64 |
| CDY51708 | Canola | nucleus | 9.31 | 13.57 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | UniProt:A0A1B6PM15 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | EnsemblPlants:KXG26719 | ProteinID:KXG26719 | ProteinID:KXG26719.1 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF4 | EnsemblPlantsGene:SORBI_3006G147400 |
| SUPFAM:SSF101941 | UniParc:UPI00081AE1E1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr6:+:50896169..50898604
Molecular Weight (calculated)
31916.3 Da
IEP (calculated)
6.511
GRAVY (calculated)
-0.567
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLREIESTL PPGFRFYPSD EELVCHYLYK KVDLHAREPW ELPDAAKLTA SEWYFFSFRD RKYATGSRTN RATKTGYWKA TGKDREVRSP ATRGVVGMRK
101: TLVFYQGRAP NGVKSCWVMH EFRLDSPHTP PKEDWVLCRV FQKRKDSEQD NGGGSSSPTT FAGASQSQGV LPEPDQPTSM MDASYVVDQP GSTAGIFAAP
201: PHHHQENLMS LGIGGLDALL MNGAMWQYTS SSVFDHFPQQ EVTSSPTMMG LGSSRGGGGD GGCSSSFFYD SGFEDMANIG GMGFPQGWTG
101: TLVFYQGRAP NGVKSCWVMH EFRLDSPHTP PKEDWVLCRV FQKRKDSEQD NGGGSSSPTT FAGASQSQGV LPEPDQPTSM MDASYVVDQP GSTAGIFAAP
201: PHHHQENLMS LGIGGLDALL MNGAMWQYTS SSVFDHFPQQ EVTSSPTMMG LGSSRGGGGD GGCSSSFFYD SGFEDMANIG GMGFPQGWTG
001: MGLKDIGSKL PPGFRFHPSD EELVCHYLCN KIRAKSDHGD VDDDDDDVDE ALKGSTDLVE IDLHICEPWE LPDVAKLNAK EWYFFSFRDR KYATGYRTNR
101: ATVSGYWKAT GKDRTVMDPR TRQLVGMRKT LVFYRNRAPN GIKTTWIMHE FRLECPNIPP KEDWVLCRVF NKGRDSSLQD NNYYNNDNQT QRLEVNDAPD
201: LNYNNQLPPL LSSPPHNHQH EKMKIQVCDQ WEQLMKQPSR TTGHPYHHHC HHQTIACGWE QMMIGSLSSP SSHGPDHESL LNLLYVDNNN SVNISGDHHQ
301: NYEKILLSSL DMTSLDHDKT CMGSSSDGGM VSDLHMECGG LSFETENILA FQ
101: ATVSGYWKAT GKDRTVMDPR TRQLVGMRKT LVFYRNRAPN GIKTTWIMHE FRLECPNIPP KEDWVLCRVF NKGRDSSLQD NNYYNNDNQT QRLEVNDAPD
201: LNYNNQLPPL LSSPPHNHQH EKMKIQVCDQ WEQLMKQPSR TTGHPYHHHC HHQTIACGWE QMMIGSLSSP SSHGPDHESL LNLLYVDNNN SVNISGDHHQ
301: NYEKILLSSL DMTSLDHDKT CMGSSSDGGM VSDLHMECGG LSFETENILA FQ
Arabidopsis Description
anac074At4g28530 [Source:UniProtKB/TrEMBL;Acc:Q8GUJ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.