CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002285_P001	Maize	cytosol, nucleus, plastid	87.38	85.17
TraesCS2D01G462900.1	Wheat	cytosol, nucleus, plastid	53.72	56.85
TraesCS2B01G484100.1	Wheat	cytosol, nucleus, plastid	51.46	55.21
HORVU2Hr1G103930.1	Barley	mitochondrion	52.43	54.92
EES13494	Sorghum	cytosol, nucleus, plastid	48.87	52.25
GSMUA_Achr3P23360_001	Banana	nucleus	45.31	50.0
EER88807	Sorghum	nucleus	49.51	49.84
GSMUA_Achr11P...	Banana	nucleus	44.34	49.1
TraesCS2A01G462500.1	Wheat	plastid	53.07	48.96
GSMUA_Achr5P00500_001	Banana	nucleus	43.37	48.91
GSMUA_Achr5P26640_001	Banana	nucleus	45.63	47.16
GSMUA_Achr8P07120_001	Banana	nucleus	44.98	46.18
EES02626	Sorghum	cytosol	21.36	46.15
GSMUA_Achr8P33310_001	Banana	nucleus	41.75	45.58
CDY51910	Canola	nucleus	36.57	45.2
AT3G12977.1	Thale cress	nucleus	39.16	43.37
KRH13649	Soybean	nucleus	42.07	42.9
KRH43817	Soybean	nucleus	41.75	42.72
Bra034713.1-P	Field mustard	nucleus	37.22	41.82
CDX82566	Canola	nucleus	37.22	41.52
CDY60115	Canola	nucleus	37.22	41.22
Bra001480.1-P	Field mustard	nucleus	36.89	41.16
CDY23558	Canola	nucleus	35.92	40.51
OQU79579	Sorghum	cytosol, nucleus, peroxisome	43.69	40.42
AT1G56010.2	Thale cress	nucleus	41.42	39.51
VIT_19s0027g00230.t01	Wine grape	nucleus	37.54	39.32
Bra030820.1-P	Field mustard	nucleus	40.45	38.94
CDY42401	Canola	nucleus	40.45	38.94
CDY10515	Canola	nucleus	40.45	38.82
Solyc07g066330.2.1	Tomato	nucleus	38.84	35.09
EES07725	Sorghum	cytosol	34.3	34.98
KXG26719	Sorghum	nucleus	32.69	34.83
KXG28193	Sorghum	cytosol	31.39	34.64
PGSC0003DMT400056916	Potato	nucleus	38.51	34.1
EES05451	Sorghum	nucleus	33.01	33.77
EES05316	Sorghum	nucleus	36.25	30.94
EER97754	Sorghum	nucleus	32.69	30.33
EER93792	Sorghum	cytosol, mitochondrion, nucleus	32.36	29.33
EES10946	Sorghum	cytosol, mitochondrion, nucleus	33.66	29.21
EER92328	Sorghum	cytosol	33.01	28.65
EES14261	Sorghum	nucleus	31.07	28.15
EES07908	Sorghum	nucleus, peroxisome, plastid	33.66	26.2
EER99125	Sorghum	nucleus	31.72	26.06
KXG28945	Sorghum	cytoskeleton, nucleus, peroxisome	29.77	24.8
OQU89451	Sorghum	cytosol	29.13	24.19
EES17917	Sorghum	cytosol	31.07	23.88
EES02651	Sorghum	nucleus	30.42	23.5
KXG23228	Sorghum	plastid	32.69	22.75

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EntrezGene:8074719	UniProt:A0A1Z5RG65	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	EnsemblPlants:OQU82346
ProteinID:OQU82346	ProteinID:OQU82346.1	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31744	PANTHER:PTHR31744:SF21
EnsemblPlantsGene:SORBI_3006G218300	SUPFAM:SSF101941	UniParc:UPI0001A86F70	RefSeq:XP_002447109.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:+:56557672..56560675

Molecular Weight (calculated)

33531.4 Da

IEP (calculated)

7.323

GRAVY (calculated)

-0.498

Length

309 amino acids

Sequence
(BLAST)

001: MSLISMMEAR LPPGFRFHPR DDELVLDYLC RKLSGKGGGG GGASYGGIAM VDVDLNKCEP WDLPGEACVG GREWYFFSLH DRKYATGQRT NRATRSGYWK
101: ATGKDRPISI SGRRRGGGGN GAGALVGMRK TLVFYQGRAP RGTKTEWVMH EFRVDGPAVA DRPGSPLQED WVLCRVFYKS RTTTTRPAAG PDEAGPLSSE
201: LIGLPMPQMA PAGDAYLSFD NTPAADGGYY YHHQDADLAD AHHHLPLPAS SLSSFRDLLS SMVEGSDAAV RGTTELHLQG WTEAAYAQQQ GGVMSSHSQQ
301: TWNPFLSSG

Best Arabidopsis Sequence Match ( AT1G56010.2 )
(BLAST)

001: METEEEMKES SISMVEAKLP PGFRFHPKDD ELVCDYLMRR SLHNNHRPPL VLIQVDLNKC EPWDIPKMAC VGGKDWYFYS QRDRKYATGL RTNRATATGY
101: WKATGKDRTI LRKGKLVGMR KTLVFYQGRA PRGRKTDWVM HEFRLQGSHH PPNHSLSSPK EDWVLCRVFH KNTEGVICRD NMGSCFDETA SASLPPLMDP
201: YINFDQEPSS YLSDDHHYII NEHVPCFSNL SQNQTLNSNL TNSVSELKIP CKNPNPLFTG GSASATLTGL DSFCSSDQMV LRALLSQLTK IDGSLGPKES
301: QSYGEGSSES LLTDIGIPST VWNC

Arabidopsis Description

NAC021NAC domain-containing protein 21/22 [Source:UniProtKB/Swiss-Prot;Acc:Q84TE6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.