Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytoskeleton, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytoskeleton 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G04060.1 | EER90487 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | KXG38822 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES02626 | Sorghum | cytosol | 28.03 | 72.73 |
| EES02651 | Sorghum | nucleus | 70.08 | 65.0 |
| OQU89451 | Sorghum | cytosol | 62.8 | 62.63 |
| EES17917 | Sorghum | cytosol | 66.58 | 61.44 |
| Zm00001d008403_P001 | Maize | plastid | 52.83 | 60.87 |
| CDY29982 | Canola | cytosol | 24.8 | 53.49 |
| HORVU3Hr1G014090.1 | Barley | nucleus | 28.57 | 48.85 |
| TraesCS3A01G077900.1 | Wheat | nucleus | 28.03 | 48.6 |
| TraesCS3B01G092800.1 | Wheat | cytosol | 27.76 | 48.36 |
| GSMUA_Achr5P07600_001 | Banana | cytosol | 30.46 | 45.94 |
| TraesCS3D01G078500.1 | Wheat | nucleus | 27.49 | 45.33 |
| GSMUA_Achr10P... | Banana | cytosol | 26.68 | 43.42 |
| TraesCS7B01G094000.1 | Wheat | nucleus | 29.65 | 40.29 |
| GSMUA_Achr9P16920_001 | Banana | cytosol | 31.81 | 38.56 |
| Os01t0104500-01 | Rice | cytosol, mitochondrion, nucleus | 33.15 | 38.44 |
| Os01t0393100-01 | Rice | nucleus | 32.88 | 37.2 |
| GSMUA_Achr3P09520_001 | Banana | cytosol | 31.81 | 37.11 |
| TraesCS5A01G245900.2 | Wheat | nucleus | 31.81 | 35.98 |
| TraesCS7D01G154200.1 | Wheat | nucleus | 34.5 | 35.96 |
| GSMUA_Achr3P18020_001 | Banana | nucleus | 28.3 | 35.84 |
| GSMUA_Achr7P18330_001 | Banana | nucleus | 29.65 | 35.71 |
| TraesCS7A01G152500.1 | Wheat | nucleus | 34.23 | 35.67 |
| GSMUA_Achr6P08600_001 | Banana | nucleus | 33.15 | 35.45 |
| TraesCS7B01G056300.1 | Wheat | nucleus | 33.96 | 35.29 |
| TraesCS7D01G189900.1 | Wheat | nucleus | 30.73 | 35.29 |
| TraesCS7D01G543400.1 | Wheat | nucleus | 32.34 | 35.29 |
| TraesCS7B01G489500.2 | Wheat | cytosol | 32.34 | 34.58 |
| EER97754 | Sorghum | nucleus | 31.0 | 34.53 |
| TraesCS7A01G569300.1 | Wheat | cytosol | 33.42 | 34.25 |
| HORVU7Hr1G031260.1 | Barley | nucleus | 32.61 | 34.18 |
| TraesCS7B01G100300.1 | Wheat | nucleus | 29.38 | 33.75 |
| TraesCS7A01G189200.1 | Wheat | nucleus | 31.0 | 32.95 |
| TraesCS7D01G196300.1 | Wheat | cytosol, nucleus, peroxisome | 31.0 | 32.95 |
| HORVU7Hr1G039700.1 | Barley | nucleus | 30.73 | 32.95 |
| CDX70804 | Canola | nucleus | 29.92 | 32.94 |
| CDY02636 | Canola | nucleus | 29.92 | 32.94 |
| EES13494 | Sorghum | cytosol, nucleus, plastid | 25.61 | 32.87 |
| HORVU4Hr1G089450.1 | Barley | cytosol, mitochondrion, nucleus, peroxisome | 31.0 | 32.86 |
| EER93792 | Sorghum | cytosol, mitochondrion, nucleus | 30.19 | 32.84 |
| CDY53250 | Canola | nucleus | 29.65 | 32.74 |
| Bra023669.1-P | Field mustard | nucleus | 29.65 | 32.74 |
| Bra006449.1-P | Field mustard | nucleus | 29.65 | 32.74 |
| Bra002148.1-P | Field mustard | nucleus | 29.65 | 32.74 |
| HORVU7Hr1G122680.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 32.61 | 32.7 |
| CDY51238 | Canola | nucleus | 29.65 | 32.64 |
| AT3G04060.1 | Thale cress | nucleus | 29.65 | 32.54 |
| AT5G18270.1 | Thale cress | nucleus | 29.38 | 32.54 |
| TraesCS3B01G092900.3 | Wheat | nucleus | 31.27 | 32.49 |
| TraesCS7A01G194700.1 | Wheat | nucleus | 30.46 | 32.38 |
| TraesCS7D01G543500.2 | Wheat | endoplasmic reticulum | 33.15 | 32.37 |
| EER92328 | Sorghum | cytosol | 31.0 | 32.3 |
| GSMUA_Achr6P32290_001 | Banana | nucleus | 29.92 | 32.08 |
| EES05451 | Sorghum | nucleus | 25.88 | 31.79 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 29.38 | 31.78 |
| Bra031950.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 29.38 | 31.69 |
| TraesCS7A01G569100.1 | Wheat | nucleus | 32.34 | 31.58 |
| CDY42901 | Canola | nucleus | 29.11 | 31.4 |
| KXG26719 | Sorghum | nucleus | 24.53 | 31.38 |
| EES14261 | Sorghum | nucleus | 28.84 | 31.38 |
| TraesCS5B01G243300.1 | Wheat | nucleus | 22.64 | 31.34 |
| Bra040153.1-P | Field mustard | nucleus | 28.84 | 31.2 |
| EER99125 | Sorghum | nucleus | 31.54 | 31.12 |
| EER88807 | Sorghum | nucleus | 25.61 | 30.94 |
| EES10946 | Sorghum | cytosol, mitochondrion, nucleus | 29.65 | 30.9 |
| KRG94783 | Soybean | nucleus | 33.69 | 30.86 |
| VIT_08s0007g07640.t01 | Wine grape | nucleus | 33.15 | 30.52 |
| EES07725 | Sorghum | cytosol | 24.8 | 30.36 |
| KRH06738 | Soybean | nucleus | 32.88 | 29.98 |
| HORVU3Hr1G014100.1 | Barley | cytosol, nucleus | 30.46 | 29.97 |
| OQU82346 | Sorghum | cytosol, nucleus, plastid | 24.8 | 29.77 |
| EES07908 | Sorghum | nucleus, peroxisome, plastid | 30.46 | 28.46 |
| EES05316 | Sorghum | nucleus | 27.76 | 28.45 |
| OQU79579 | Sorghum | cytosol, nucleus, peroxisome | 25.61 | 28.44 |
| KRH70130 | Soybean | nucleus | 30.46 | 27.56 |
| KRH08479 | Soybean | nucleus | 30.46 | 27.56 |
| KXG28193 | Sorghum | cytosol | 18.33 | 24.29 |
| GSMUA_Achr8P21470_001 | Banana | nucleus | 33.69 | 24.22 |
| KXG23228 | Sorghum | plastid | 28.3 | 23.65 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | UniProt:A0A1B6PTE4 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | EnsemblPlants:KXG28945 | ProteinID:KXG28945 | ProteinID:KXG28945.1 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF23 | EnsemblPlantsGene:SORBI_3005G188000 |
| SUPFAM:SSF101941 | UniParc:UPI00081AC9D4 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr5:+:67269303..67271135
Molecular Weight (calculated)
41342.6 Da
IEP (calculated)
5.487
GRAVY (calculated)
-0.403
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MADQQQPQQK GMNTVHAGGL DLPPGFRFHP SDYEIVSHYL TNKVRNMDLT YTAFEEVDLK KTEPWNLPIK AKWGEKEWYF FYLKDRKYST GLRANRATKA
101: GYWKATGKDK EVYNTIEGVV VLVGMKKTLV FYKGKAPRGD KTNWVMHEYR LEGSNSLSSP ASTSNSADNV VTTMKASASA FKDEWVVCRV FEKTIGIKKT
201: TAPAYQVAMD GAEIDQRNIN PTIPIPMPVQ LPLSMSMPMQ FPSLPDFTMD LMPPCYPNTS AEMSPMVGIG GGLQINDALF DNSIAALPQM NFYNQMGMEA
301: TADQMDMGVV ADQMGKGGGF DVAMLESRPS SMVLERDEQA NATEISSMLS MTGLGSVTTT IEMNDTWKYK Y
101: GYWKATGKDK EVYNTIEGVV VLVGMKKTLV FYKGKAPRGD KTNWVMHEYR LEGSNSLSSP ASTSNSADNV VTTMKASASA FKDEWVVCRV FEKTIGIKKT
201: TAPAYQVAMD GAEIDQRNIN PTIPIPMPVQ LPLSMSMPMQ FPSLPDFTMD LMPPCYPNTS AEMSPMVGIG GGLQINDALF DNSIAALPQM NFYNQMGMEA
301: TADQMDMGVV ADQMGKGGGF DVAMLESRPS SMVLERDEQA NATEISSMLS MTGLGSVTTT IEMNDTWKYK Y
001: MEENLPPGFR FHPTDEELIT HYLCRKVSDI GFTGKAVVDV DLNKCEPWDL PAKASMGEKE WYFFSQRDRK YPTGLRTNRA TEAGYWKTTG KDKEIYRSGV
101: LVGMKKTLVF YKGRAPKGEK SNWVMHEYRL ESKQPFNPTN KEEWVVCRVF EKSTAAKKAQ EQQPQSSQPS FGSPCDANSS MANEFEDIDE LPNLNSNSST
201: IDYNNHIHQY SQRNVYSEDN TTSTAGLNMN MNMASTNLQS WTTSLLGPPL SPINSLLLKA FQIRNSYSFP KEMIPSFNHS SLQQGVSNMI QNASSSSQVQ
301: PQPQEEAFNM DSIW
101: LVGMKKTLVF YKGRAPKGEK SNWVMHEYRL ESKQPFNPTN KEEWVVCRVF EKSTAAKKAQ EQQPQSSQPS FGSPCDANSS MANEFEDIDE LPNLNSNSST
201: IDYNNHIHQY SQRNVYSEDN TTSTAGLNMN MNMASTNLQS WTTSLLGPPL SPINSLLLKA FQIRNSYSFP KEMIPSFNHS SLQQGVSNMI QNASSSSQVQ
301: PQPQEEAFNM DSIW
Arabidopsis Description
anac058NAC domain containing protein 58 [Source:UniProtKB/TrEMBL;Acc:Q9LS50]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.