Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_02s0012g01920.t01 | |
| VIT_02s0012g01930.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G04060.1 | VIT_02s0012g01920.t01 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | VIT_02s0012g01930.t01 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29982 | Canola | cytosol | 30.27 | 70.93 |
| GSMUA_Achr5P07600_001 | Banana | cytosol | 38.71 | 63.41 |
| GSMUA_Achr10P... | Banana | cytosol | 34.24 | 60.53 |
| AT5G18270.1 | Thale cress | nucleus | 47.39 | 57.01 |
| GSMUA_Achr9P16920_001 | Banana | cytosol | 42.93 | 56.54 |
| Bra006449.1-P | Field mustard | nucleus | 46.65 | 55.95 |
| EES02626 | Sorghum | cytosol | 19.85 | 55.94 |
| TraesCS3B01G092800.1 | Wheat | cytosol | 29.53 | 55.87 |
| CDY51238 | Canola | nucleus | 46.65 | 55.79 |
| CDX70804 | Canola | nucleus | 46.4 | 55.49 |
| GSMUA_Achr7P18330_001 | Banana | nucleus | 42.18 | 55.19 |
| CDY02636 | Canola | nucleus | 46.15 | 55.19 |
| Bra023669.1-P | Field mustard | nucleus | 45.91 | 55.06 |
| CDY53250 | Canola | nucleus | 45.91 | 55.06 |
| KRG94783 | Soybean | nucleus | 55.09 | 54.81 |
| GSMUA_Achr6P08600_001 | Banana | nucleus | 46.9 | 54.47 |
| Bra002148.1-P | Field mustard | nucleus | 45.41 | 54.46 |
| TraesCS3A01G077900.1 | Wheat | nucleus | 28.78 | 54.21 |
| GSMUA_Achr3P09520_001 | Banana | cytosol | 42.68 | 54.09 |
| KRH06738 | Soybean | nucleus | 54.59 | 54.05 |
| HORVU3Hr1G014090.1 | Barley | nucleus | 29.03 | 53.92 |
| Bra040153.1-P | Field mustard | nucleus | 45.66 | 53.64 |
| CDY42901 | Canola | nucleus | 45.16 | 52.91 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 44.91 | 52.77 |
| AT3G04060.1 | Thale cress | nucleus | 44.17 | 52.66 |
| Bra031950.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 44.91 | 52.62 |
| TraesCS3D01G078500.1 | Wheat | nucleus | 28.78 | 51.56 |
| GSMUA_Achr6P32290_001 | Banana | nucleus | 43.67 | 50.87 |
| GSMUA_Achr3P18020_001 | Banana | nucleus | 36.72 | 50.51 |
| KRH70130 | Soybean | nucleus | 51.36 | 50.49 |
| KRH08479 | Soybean | nucleus | 51.12 | 50.24 |
| TraesCS4D01G176000.1 | Wheat | nucleus | 42.18 | 49.71 |
| TraesCS4A01G130600.1 | Wheat | nucleus | 41.94 | 49.42 |
| HORVU2Hr1G017360.1 | Barley | nucleus | 18.61 | 49.34 |
| TraesCS4B01G174000.1 | Wheat | cytosol | 41.44 | 48.97 |
| Zm00001d047554_P001 | Maize | cytoskeleton, cytosol, nucleus | 42.18 | 48.85 |
| HORVU2Hr1G017380.1 | Barley | cytosol, nucleus, plastid | 28.29 | 48.51 |
| EER92328 | Sorghum | cytosol | 42.18 | 47.75 |
| HORVU4Hr1G051360.3 | Barley | nucleus | 40.69 | 47.4 |
| Zm00001d028995_P001 | Maize | cytosol | 40.94 | 47.01 |
| VIT_17s0000g06400.t01 | Wine grape | nucleus | 41.69 | 46.67 |
| Os07t0684800-01 | Rice | cytosol | 34.49 | 46.18 |
| Os03t0327100-01 | Rice | nucleus | 40.45 | 45.53 |
| EER97754 | Sorghum | nucleus | 36.23 | 43.84 |
| TraesCS7B01G094000.1 | Wheat | nucleus | 29.03 | 42.86 |
| TraesCS2A01G101200.1 | Wheat | nucleus | 29.28 | 42.75 |
| Zm00001d022517_P001 | Maize | nucleus | 33.5 | 42.45 |
| TraesCS2D01G100800.1 | Wheat | nucleus | 29.03 | 42.39 |
| VIT_19s0014g02200.t01 | Wine grape | nucleus | 37.72 | 41.87 |
| VIT_17s0000g03660.t01 | Wine grape | nucleus | 33.75 | 41.59 |
| TraesCS5A01G245900.2 | Wheat | nucleus | 33.5 | 41.16 |
| TraesCS2D01G100900.1 | Wheat | nucleus | 35.98 | 41.08 |
| TraesCS2B01G118500.1 | Wheat | cytosol | 35.48 | 40.62 |
| VIT_14s0108g01070.t01 | Wine grape | nucleus | 42.43 | 40.62 |
| Os01t0104500-01 | Rice | cytosol, mitochondrion, nucleus | 31.76 | 40.0 |
| TraesCS2A01G101100.1 | Wheat | cytosol, nucleus, plastid | 34.24 | 39.66 |
| TraesCS2B01G118200.1 | Wheat | cytosol, nucleus, plastid | 34.49 | 39.6 |
| VIT_04s0008g02710.t01 | Wine grape | nucleus | 31.76 | 39.38 |
| TraesCS2B01G118400.1 | Wheat | cytosol, nucleus, plastid | 34.24 | 39.32 |
| Zm00001d005028_P001 | Maize | cytosol | 31.27 | 39.13 |
| TraesCS7B01G100300.1 | Wheat | nucleus | 31.27 | 39.01 |
| TraesCS2A01G101400.1 | Wheat | cytosol | 33.99 | 38.81 |
| TraesCS7A01G152500.1 | Wheat | nucleus | 34.24 | 38.76 |
| Os01t0393100-01 | Rice | nucleus | 31.51 | 38.72 |
| TraesCS7B01G056300.1 | Wheat | nucleus | 34.24 | 38.66 |
| TraesCS7D01G154200.1 | Wheat | nucleus | 33.99 | 38.48 |
| TraesCS7D01G189900.1 | Wheat | nucleus | 30.77 | 38.39 |
| HORVU7Hr1G031260.1 | Barley | nucleus | 33.5 | 38.14 |
| VIT_19s0027g00230.t01 | Wine grape | nucleus | 27.79 | 37.97 |
| TraesCS2D01G100600.1 | Wheat | cytosol, nucleus, plastid | 34.24 | 37.5 |
| HORVU2Hr1G017400.3 | Barley | nucleus | 35.24 | 37.08 |
| TraesCS7D01G543400.1 | Wheat | nucleus | 31.27 | 37.06 |
| TraesCS7D01G196300.1 | Wheat | cytosol, nucleus, peroxisome | 31.76 | 36.68 |
| TraesCS2A01G101000.1 | Wheat | cytosol, nucleus, plastid | 34.74 | 36.65 |
| TraesCS5B01G243300.1 | Wheat | nucleus | 24.32 | 36.57 |
| TraesCS7A01G189200.1 | Wheat | nucleus | 31.51 | 36.39 |
| HORVU4Hr1G089450.1 | Barley | cytosol, mitochondrion, nucleus, peroxisome | 31.51 | 36.29 |
| TraesCS3B01G092900.3 | Wheat | nucleus | 32.01 | 36.13 |
| TraesCS7B01G489500.2 | Wheat | cytosol | 31.02 | 36.02 |
| HORVU7Hr1G039700.1 | Barley | nucleus | 30.77 | 35.84 |
| TraesCS7A01G194700.1 | Wheat | nucleus | 31.02 | 35.82 |
| TraesCS7A01G569300.1 | Wheat | cytosol | 32.01 | 35.64 |
| HORVU2Hr1G017350.1 | Barley | nucleus | 34.99 | 35.52 |
| TraesCS2B01G118300.1 | Wheat | cytosol | 33.5 | 34.79 |
| OQU89451 | Sorghum | cytosol | 32.01 | 34.68 |
| Zm00001d052390_P001 | Maize | nucleus | 31.51 | 34.23 |
| HORVU7Hr1G122680.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 31.02 | 33.78 |
| EES02651 | Sorghum | nucleus | 33.25 | 33.5 |
| Zm00001d040189_P002 | Maize | mitochondrion, nucleus, peroxisome | 32.26 | 33.25 |
| HORVU2Hr1G017370.1 | Barley | cytosol, nucleus, plastid | 34.99 | 33.18 |
| KXG28945 | Sorghum | cytoskeleton, nucleus, peroxisome | 30.52 | 33.15 |
| Os12t0123800-01 | Rice | nucleus | 32.51 | 33.08 |
| TraesCS2D01G100700.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 34.99 | 33.02 |
| TraesCS5A01G143100.1 | Wheat | nucleus | 33.0 | 33.0 |
| TraesCS5B01G141900.1 | Wheat | nucleus | 32.75 | 32.92 |
| TraesCS7D01G543500.2 | Wheat | endoplasmic reticulum | 31.02 | 32.89 |
| EES07908 | Sorghum | nucleus, peroxisome, plastid | 32.26 | 32.75 |
| TraesCS7A01G569100.1 | Wheat | nucleus | 30.77 | 32.63 |
| TraesCS5D01G148900.1 | Wheat | nucleus | 32.26 | 32.34 |
| Zm00001d008403_P001 | Maize | plastid | 25.81 | 32.3 |
| HORVU3Hr1G014100.1 | Barley | cytosol, nucleus | 30.02 | 32.1 |
| EES17917 | Sorghum | cytosol | 32.01 | 32.09 |
| VIT_07s0005g03610.t01 | Wine grape | mitochondrion, nucleus | 19.11 | 31.43 |
| VIT_18s0122g00800.t01 | Wine grape | nucleus | 32.01 | 30.35 |
| GSMUA_Achr8P21470_001 | Banana | nucleus | 38.46 | 30.04 |
| Os11t0127000-01 | Rice | nucleus | 21.84 | 29.83 |
| HORVU5Hr1G045640.7 | Barley | mitochondrion | 32.51 | 28.79 |
Protein Annotations
| EntrezGene:100263995 | wikigene:100263995 | MapMan:15.5.17 | Gene3D:3.30.310.150 | ProteinID:CCB55185 | ProteinID:CCB55185.1 |
| UniProt:F6HLA2 | EMBL:FN595991 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 |
| InterPro:IPR036093 | EntrezGene:LOC100263995 | wikigene:LOC100263995 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 |
| PFscan:PS51005 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF7 | SUPFAM:SSF101941 | TIGR:TC54748 | UniParc:UPI0001983F2A |
| ArrayExpress:VIT_08s0007g07640 | EnsemblPlantsGene:VIT_08s0007g07640 | EnsemblPlants:VIT_08s0007g07640.t01 | unigene:Vvi.12308 | RefSeq:XP_002277068 | RefSeq:XP_002277068.1 |
| RefSeq:XP_010653830.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr8:+:21123197..21124915
Molecular Weight (calculated)
45441.9 Da
IEP (calculated)
6.989
GRAVY (calculated)
-0.777
Length
403 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEASLADQG DDLMDLPPGF RFHPTDEEII SYYLTERVMN SSFSARAIGE VDLNKCEPWD LPKKAKMGEK EWYFFCQRDR KYPTGMRTNR ATESGYWKAT
101: GKDKEIYKGK GCLVGMKKTL VFYRGRAPKG EKSNWVMHEY RLEGKFSYYN LPKAAKDEWV VCRVFHKSAG IKRSLIPAPI RMNSFGDDLL DCSSLPPLID
201: PPYSNPNKND SCFTNGEDEF KGSSTRFSDG NHHYPYFSPT INGHQLQKQQ DQKSFLLSPN NVHTTSNYQA TLSNPTPNSI FYPQVSPSNP LFPFQASPTP
301: SYSHWQMGSS FPSFPGSGFK GSDPTSTVRA QTSGVQRQCK VEQFSSNQSM VSLSQDTGLS TDMNTEISSV LSKHQDTGNN RSYEDLQGPS VGQIGDLDYL
401: LDY
101: GKDKEIYKGK GCLVGMKKTL VFYRGRAPKG EKSNWVMHEY RLEGKFSYYN LPKAAKDEWV VCRVFHKSAG IKRSLIPAPI RMNSFGDDLL DCSSLPPLID
201: PPYSNPNKND SCFTNGEDEF KGSSTRFSDG NHHYPYFSPT INGHQLQKQQ DQKSFLLSPN NVHTTSNYQA TLSNPTPNSI FYPQVSPSNP LFPFQASPTP
301: SYSHWQMGSS FPSFPGSGFK GSDPTSTVRA QTSGVQRQCK VEQFSSNQSM VSLSQDTGLS TDMNTEISSV LSKHQDTGNN RSYEDLQGPS VGQIGDLDYL
401: LDY
001: MAVVVEEGVV LNHGGEELVD LPPGFRFHPT DEEIITCYLK EKVLNSRFTA VAMGEADLNK CEPWDLPKRA KMGEKEFYFF CQRDRKYPTG MRTNRATESG
101: YWKATGKDKE IFKGKGCLVG MKKTLVFYRG RAPKGEKTNW VMHEYRLEGK YSYYNLPKSA RDEWVVCRVF HKNNPSTTTQ PMTRIPVEDF TRMDSLENID
201: HLLDFSSLPP LIDPSFMSQT EQPNFKPINP PTYDISSPIQ PHHFNSYQSI FNHQVFGSAS GSTYNNNNEM IKMEQSLVSV SQETCLSSDV NANMTTTTEV
301: SSGPVMKQEM GMMGMVNGSK SYEDLCDLRG DLWDF
101: YWKATGKDKE IFKGKGCLVG MKKTLVFYRG RAPKGEKTNW VMHEYRLEGK YSYYNLPKSA RDEWVVCRVF HKNNPSTTTQ PMTRIPVEDF TRMDSLENID
201: HLLDFSSLPP LIDPSFMSQT EQPNFKPINP PTYDISSPIQ PHHFNSYQSI FNHQVFGSAS GSTYNNNNEM IKMEQSLVSV SQETCLSSDV NANMTTTTEV
301: SSGPVMKQEM GMMGMVNGSK SYEDLCDLRG DLWDF
Arabidopsis Description
ANAC087NAC domain-containing protein 87 [Source:UniProtKB/Swiss-Prot;Acc:Q9FK44]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.