Subcellular Localization
min:
: max
Winner_takes_all: cytoskeleton, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytoskeleton 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d012821_P003 | |
| Zm00001d014423_P002 | |
| Zm00001d030110_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G04060.1 | Zm00001d012821_P003 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | Zm00001d014423_P002 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | Zm00001d030110_P001 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER92328 | Sorghum | cytosol | 89.94 | 87.92 |
| Zm00001d028995_P001 | Maize | cytosol | 87.36 | 86.61 |
| TraesCS4D01G176000.1 | Wheat | nucleus | 75.29 | 76.61 |
| TraesCS4B01G174000.1 | Wheat | cytosol | 74.71 | 76.25 |
| TraesCS4A01G130600.1 | Wheat | nucleus | 74.71 | 76.02 |
| HORVU4Hr1G051360.3 | Barley | nucleus | 73.85 | 74.28 |
| Os03t0327100-01 | Rice | nucleus | 70.11 | 68.16 |
| CDY29982 | Canola | cytosol | 32.47 | 65.7 |
| GSMUA_Achr10P... | Banana | cytosol | 36.49 | 55.7 |
| GSMUA_Achr5P07600_001 | Banana | cytosol | 37.36 | 52.85 |
| Zm00001d022517_P001 | Maize | nucleus | 47.99 | 52.52 |
| GSMUA_Achr6P08600_001 | Banana | nucleus | 47.7 | 47.84 |
| GSMUA_Achr9P16920_001 | Banana | cytosol | 41.95 | 47.71 |
| GSMUA_Achr3P18020_001 | Banana | nucleus | 39.94 | 47.44 |
| GSMUA_Achr3P09520_001 | Banana | cytosol | 43.1 | 47.17 |
| GSMUA_Achr6P32290_001 | Banana | nucleus | 46.84 | 47.11 |
| CDY53250 | Canola | nucleus | 45.4 | 47.02 |
| CDY02636 | Canola | nucleus | 45.4 | 46.88 |
| AT5G18270.1 | Thale cress | nucleus | 45.11 | 46.87 |
| GSMUA_Achr7P18330_001 | Banana | nucleus | 41.38 | 46.75 |
| Bra023669.1-P | Field mustard | nucleus | 45.11 | 46.73 |
| Bra002148.1-P | Field mustard | nucleus | 44.83 | 46.43 |
| Bra006449.1-P | Field mustard | nucleus | 44.25 | 45.83 |
| CDY51238 | Canola | nucleus | 43.97 | 45.4 |
| CDX70804 | Canola | nucleus | 43.97 | 45.4 |
| Bra040153.1-P | Field mustard | nucleus | 44.25 | 44.9 |
| AT3G04060.1 | Thale cress | nucleus | 43.1 | 44.38 |
| Bra031950.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 43.39 | 43.9 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 43.1 | 43.73 |
| CDY42901 | Canola | nucleus | 42.24 | 42.73 |
| VIT_08s0007g07640.t01 | Wine grape | nucleus | 48.85 | 42.18 |
| KRG94783 | Soybean | nucleus | 47.13 | 40.49 |
| KRH06738 | Soybean | nucleus | 46.84 | 40.05 |
| Zm00001d005028_P001 | Maize | cytosol | 36.78 | 39.75 |
| Zm00001d050893_P001 | Maize | nucleus | 39.08 | 39.08 |
| KRH70130 | Soybean | nucleus | 45.98 | 39.02 |
| KRH08479 | Soybean | nucleus | 45.98 | 39.02 |
| Zm00001d033308_P001 | Maize | nucleus | 34.77 | 37.12 |
| Zm00001d003414_P002 | Maize | cytosol, mitochondrion, nucleus | 37.64 | 35.89 |
| Zm00001d013717_P001 | Maize | nucleus | 33.33 | 35.15 |
| Zm00001d024268_P001 | Maize | cytosol, nucleus, plastid | 28.45 | 35.11 |
| Zm00001d016950_P002 | Maize | nucleus | 37.36 | 34.57 |
| Zm00001d052390_P001 | Maize | nucleus | 36.49 | 34.23 |
| Zm00001d020982_P001 | Maize | cytosol, mitochondrion, nucleus | 36.49 | 33.78 |
| Zm00001d035266_P001 | Maize | nucleus | 34.48 | 33.61 |
| Zm00001d006053_P001 | Maize | nucleus | 37.07 | 33.25 |
| Zm00001d051140_P001 | Maize | cytosol, mitochondrion, nucleus | 27.59 | 32.65 |
| Zm00001d014405_P001 | Maize | nucleus | 28.45 | 32.46 |
| Zm00001d041791_P001 | Maize | nucleus | 34.2 | 32.34 |
| Zm00001d025861_P001 | Maize | cytosol, nucleus, plastid | 26.72 | 31.74 |
| Zm00001d002285_P001 | Maize | cytosol, nucleus, plastid | 28.45 | 31.23 |
| Zm00001d040189_P002 | Maize | mitochondrion, nucleus, peroxisome | 35.06 | 31.2 |
| Zm00001d018435_P001 | Maize | cytosol, mitochondrion, nucleus | 26.44 | 31.08 |
| Zm00001d003052_P001 | Maize | cytosol, mitochondrion, nucleus | 25.86 | 30.3 |
| Zm00001d008403_P001 | Maize | plastid | 27.59 | 29.81 |
| Zm00001d051956_P001 | Maize | cytosol, mitochondrion, nucleus | 25.29 | 29.53 |
| Zm00001d041472_P001 | Maize | cytosol, nucleus, peroxisome | 28.16 | 28.91 |
| GSMUA_Achr8P21470_001 | Banana | nucleus | 39.66 | 26.74 |
| Zm00001d031463_P002 | Maize | mitochondrion | 29.89 | 24.64 |
Protein Annotations
| EntrezGene:100281341 | MapMan:15.5.17 | Gene3D:3.30.310.150 | ProteinID:AQL06975.1 | UniProt:B6SUI0 | EMBL:EU956395 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF47 | SUPFAM:SSF101941 |
| UniParc:UPI000182AEFE | EnsemblPlantsGene:Zm00001d047554 | EnsemblPlants:Zm00001d047554_P001 | EnsemblPlants:Zm00001d047554_T001 | SEG:seg | : |
Description
NAC-transcription factor 81GRAB2 protein%3B Putative NAC domain transcription factor superfamily protein
Coordinates
chr9:+:135223915..135225952
Molecular Weight (calculated)
38433.4 Da
IEP (calculated)
5.974
GRAVY (calculated)
-0.459
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEVSVINQA EVEDAGAGQL DLPPGFRFHP TDEEIISHYL AHKALNHRFV SGVIGEVDLN KCEPWDLPGR AKMGEKEWYF FCHKDRKYPT GTRTNRATET
101: GYWKATGKDK EIFRGRGVLV GMKKTLVFYR GRAPRGEKTG WVMHEFRLEG KLPERLPRSA KDEWAVCKVF NKELAARTEP IMAAAGAGEL ERVGSLGFLS
201: ELLDSAELPA LIGADVDEVI DFNGPASTSG APGTSHSHLP VKMEEHALLH MQYQPPPPPT SYYSSQYFSL PAMNSGDVLP PAIRRYCKAE QQVVSGQTAA
301: SEVSPSRETG LSADPNAEIS SAVTPSSSHQ FLPEFDDPVL NLADLWKY
101: GYWKATGKDK EIFRGRGVLV GMKKTLVFYR GRAPRGEKTG WVMHEFRLEG KLPERLPRSA KDEWAVCKVF NKELAARTEP IMAAAGAGEL ERVGSLGFLS
201: ELLDSAELPA LIGADVDEVI DFNGPASTSG APGTSHSHLP VKMEEHALLH MQYQPPPPPT SYYSSQYFSL PAMNSGDVLP PAIRRYCKAE QQVVSGQTAA
301: SEVSPSRETG LSADPNAEIS SAVTPSSSHQ FLPEFDDPVL NLADLWKY
001: MAVVVEEGVV LNHGGEELVD LPPGFRFHPT DEEIITCYLK EKVLNSRFTA VAMGEADLNK CEPWDLPKRA KMGEKEFYFF CQRDRKYPTG MRTNRATESG
101: YWKATGKDKE IFKGKGCLVG MKKTLVFYRG RAPKGEKTNW VMHEYRLEGK YSYYNLPKSA RDEWVVCRVF HKNNPSTTTQ PMTRIPVEDF TRMDSLENID
201: HLLDFSSLPP LIDPSFMSQT EQPNFKPINP PTYDISSPIQ PHHFNSYQSI FNHQVFGSAS GSTYNNNNEM IKMEQSLVSV SQETCLSSDV NANMTTTTEV
301: SSGPVMKQEM GMMGMVNGSK SYEDLCDLRG DLWDF
101: YWKATGKDKE IFKGKGCLVG MKKTLVFYRG RAPKGEKTNW VMHEYRLEGK YSYYNLPKSA RDEWVVCRVF HKNNPSTTTQ PMTRIPVEDF TRMDSLENID
201: HLLDFSSLPP LIDPSFMSQT EQPNFKPINP PTYDISSPIQ PHHFNSYQSI FNHQVFGSAS GSTYNNNNEM IKMEQSLVSV SQETCLSSDV NANMTTTTEV
301: SSGPVMKQEM GMMGMVNGSK SYEDLCDLRG DLWDF
Arabidopsis Description
ANAC087NAC domain-containing protein 87 [Source:UniProtKB/Swiss-Prot;Acc:Q9FK44]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.