Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d012821_P003 | |
| Zm00001d014423_P002 | |
| Zm00001d030110_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G04060.1 | Zm00001d012821_P003 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | Zm00001d014423_P002 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | Zm00001d030110_P001 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d008403_P001 | Maize | plastid | 61.64 | 74.84 |
| EES17917 | Sorghum | cytosol | 72.89 | 70.9 |
| CDY29982 | Canola | cytosol | 25.32 | 57.56 |
| HORVU3Hr1G014090.1 | Barley | nucleus | 28.64 | 51.61 |
| TraesCS3A01G077900.1 | Wheat | nucleus | 27.88 | 50.93 |
| TraesCS3B01G092800.1 | Wheat | cytosol | 27.11 | 49.77 |
| TraesCS3D01G078500.1 | Wheat | nucleus | 27.88 | 48.44 |
| GSMUA_Achr5P07600_001 | Banana | cytosol | 30.18 | 47.97 |
| GSMUA_Achr10P... | Banana | cytosol | 27.62 | 47.37 |
| Os01t0104500-01 | Rice | cytosol, mitochondrion, nucleus | 34.27 | 41.88 |
| TraesCS7B01G094000.1 | Wheat | nucleus | 28.9 | 41.39 |
| Os01t0393100-01 | Rice | nucleus | 34.27 | 40.85 |
| GSMUA_Achr3P18020_001 | Banana | nucleus | 30.18 | 40.27 |
| GSMUA_Achr9P16920_001 | Banana | cytosol | 31.46 | 40.2 |
| GSMUA_Achr3P09520_001 | Banana | cytosol | 31.97 | 39.31 |
| TraesCS7D01G154200.1 | Wheat | nucleus | 35.55 | 39.04 |
| GSMUA_Achr7P18330_001 | Banana | nucleus | 30.69 | 38.96 |
| TraesCS7A01G152500.1 | Wheat | nucleus | 35.29 | 38.76 |
| HORVU7Hr1G031260.1 | Barley | nucleus | 34.78 | 38.42 |
| TraesCS7B01G056300.1 | Wheat | nucleus | 35.04 | 38.38 |
| GSMUA_Achr6P08600_001 | Banana | nucleus | 34.02 | 38.33 |
| TraesCS7D01G196300.1 | Wheat | cytosol, nucleus, peroxisome | 34.02 | 38.11 |
| TraesCS5A01G245900.2 | Wheat | nucleus | 31.71 | 37.8 |
| TraesCS7B01G100300.1 | Wheat | nucleus | 31.2 | 37.77 |
| TraesCS7B01G489500.2 | Wheat | cytosol | 33.5 | 37.75 |
| TraesCS7D01G543400.1 | Wheat | nucleus | 32.74 | 37.65 |
| TraesCS7A01G194700.1 | Wheat | nucleus | 32.74 | 36.68 |
| Bra023669.1-P | Field mustard | nucleus | 31.46 | 36.61 |
| CDY53250 | Canola | nucleus | 31.46 | 36.61 |
| HORVU4Hr1G089450.1 | Barley | cytosol, mitochondrion, nucleus, peroxisome | 32.74 | 36.57 |
| CDY02636 | Canola | nucleus | 31.46 | 36.5 |
| Zm00001d024268_P001 | Maize | cytosol, nucleus, plastid | 26.09 | 36.17 |
| Zm00001d022517_P001 | Maize | nucleus | 29.41 | 36.16 |
| Bra002148.1-P | Field mustard | nucleus | 30.95 | 36.01 |
| HORVU7Hr1G122680.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 34.02 | 35.95 |
| CDX70804 | Canola | nucleus | 30.95 | 35.91 |
| HORVU7Hr1G039700.1 | Barley | nucleus | 31.71 | 35.84 |
| Bra006449.1-P | Field mustard | nucleus | 30.69 | 35.71 |
| CDY51238 | Canola | nucleus | 30.69 | 35.61 |
| TraesCS7D01G189900.1 | Wheat | nucleus | 29.41 | 35.6 |
| Zm00001d033308_P001 | Maize | nucleus | 29.67 | 35.58 |
| AT3G04060.1 | Thale cress | nucleus | 30.43 | 35.21 |
| Zm00001d005028_P001 | Maize | cytosol | 28.9 | 35.09 |
| TraesCS7A01G569300.1 | Wheat | cytosol | 32.48 | 35.08 |
| Zm00001d047554_P001 | Maize | cytoskeleton, cytosol, nucleus | 31.2 | 35.06 |
| TraesCS7D01G543500.2 | Wheat | endoplasmic reticulum | 34.02 | 35.0 |
| AT5G18270.1 | Thale cress | nucleus | 29.92 | 34.93 |
| Zm00001d013717_P001 | Maize | nucleus | 29.41 | 34.85 |
| TraesCS7A01G569100.1 | Wheat | nucleus | 33.76 | 34.74 |
| TraesCS3B01G092900.3 | Wheat | nucleus | 31.71 | 34.73 |
| GSMUA_Achr6P32290_001 | Banana | nucleus | 30.69 | 34.68 |
| TraesCS7A01G189200.1 | Wheat | nucleus | 30.95 | 34.67 |
| Zm00001d050893_P001 | Maize | nucleus | 30.69 | 34.48 |
| Zm00001d028995_P001 | Maize | cytosol | 30.95 | 34.47 |
| Zm00001d014405_P001 | Maize | nucleus | 26.85 | 34.43 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 30.18 | 34.4 |
| TraesCS5B01G243300.1 | Wheat | nucleus | 23.53 | 34.33 |
| Bra031950.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 30.18 | 34.3 |
| CDY42901 | Canola | nucleus | 29.92 | 34.01 |
| Bra040153.1-P | Field mustard | nucleus | 29.67 | 33.82 |
| Zm00001d051140_P001 | Maize | cytosol, mitochondrion, nucleus | 25.32 | 33.67 |
| Zm00001d020982_P001 | Maize | cytosol, mitochondrion, nucleus | 32.23 | 33.51 |
| KRG94783 | Soybean | nucleus | 34.02 | 32.84 |
| Zm00001d006053_P001 | Maize | nucleus | 32.23 | 32.47 |
| KRH06738 | Soybean | nucleus | 33.76 | 32.43 |
| HORVU3Hr1G014100.1 | Barley | cytosol, nucleus | 31.2 | 32.36 |
| VIT_08s0007g07640.t01 | Wine grape | nucleus | 33.25 | 32.26 |
| Zm00001d003414_P002 | Maize | cytosol, mitochondrion, nucleus | 29.67 | 31.78 |
| Zm00001d025861_P001 | Maize | cytosol, nucleus, plastid | 23.79 | 31.74 |
| Zm00001d035266_P001 | Maize | nucleus | 28.9 | 31.65 |
| Zm00001d016950_P002 | Maize | nucleus | 30.43 | 31.65 |
| Zm00001d003052_P001 | Maize | cytosol, mitochondrion, nucleus | 23.79 | 31.31 |
| Zm00001d051956_P001 | Maize | cytosol, mitochondrion, nucleus | 23.79 | 31.21 |
| Zm00001d052390_P001 | Maize | nucleus | 29.41 | 31.0 |
| Zm00001d041791_P001 | Maize | nucleus | 29.16 | 30.98 |
| Zm00001d018435_P001 | Maize | cytosol, mitochondrion, nucleus | 23.27 | 30.74 |
| Zm00001d002285_P001 | Maize | cytosol, nucleus, plastid | 24.55 | 30.28 |
| KRH70130 | Soybean | nucleus | 31.71 | 30.24 |
| KRH08479 | Soybean | nucleus | 31.46 | 30.0 |
| Zm00001d041472_P001 | Maize | cytosol, nucleus, peroxisome | 25.58 | 29.5 |
| Zm00001d031463_P002 | Maize | mitochondrion | 28.64 | 26.54 |
| GSMUA_Achr8P21470_001 | Banana | nucleus | 33.5 | 25.39 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EntrezGene:542131 | UniProt:A0A060D1R6 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | EMBL:KJ727759 | InterPro:NAC-dom | InterPro:NAC_dom_sf |
| ProteinID:ONM30741.1 | ProteinID:ONM30743.1 | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF23 |
| SUPFAM:SSF101941 | UniParc:UPI000189D285 | EnsemblPlantsGene:Zm00001d040189 | EnsemblPlants:Zm00001d040189_P002 | EnsemblPlants:Zm00001d040189_T002 | SEG:seg |
Description
no-apical-meristem-related protein1 no-apical-meristem-related protein1
Coordinates
chr3:-:31401124..31403248
Molecular Weight (calculated)
42134.5 Da
IEP (calculated)
6.057
GRAVY (calculated)
-0.357
Length
391 amino acids
Sequence
(BLAST)
(BLAST)
001: MADQQQPQQQ PQEMDVDRTG GLELPPGFRF HPSDFEIIND YLTKKVHDRD YSCIAIADAD LNKTEPWDLP KVAKMGEKEW YFFYQKDRKY PTGLRANRAT
101: EAGYWKATGK DKEVYNPFAA EGLLLVGMKK TLVFYKGRAP RGDKTNWVMH EYRLEGSGRL PASPASASGS ATNIAAAMMK ASASACKDEW VVCRVFNKTT
201: GIKKTAAPAY QVAMAGPEMD QNQNNIPAIP IPMPLQLPLP VPMQMQFPIL PDFAMDPVAP YYPNPNAGAG MMPPMALAGM GGAGGLQING ALFGNPVPAP
301: LPMNFYHHQM GMGAAAGQVD MGAAAGQMDM GAAGAGAGGF DVAAPESRPS SMVSQKDEQA NAAEISSMMS VTGPGSATTT IEMDGIWKYK Y
101: EAGYWKATGK DKEVYNPFAA EGLLLVGMKK TLVFYKGRAP RGDKTNWVMH EYRLEGSGRL PASPASASGS ATNIAAAMMK ASASACKDEW VVCRVFNKTT
201: GIKKTAAPAY QVAMAGPEMD QNQNNIPAIP IPMPLQLPLP VPMQMQFPIL PDFAMDPVAP YYPNPNAGAG MMPPMALAGM GGAGGLQING ALFGNPVPAP
301: LPMNFYHHQM GMGAAAGQVD MGAAAGQMDM GAAGAGAGGF DVAAPESRPS SMVSQKDEQA NAAEISSMMS VTGPGSATTT IEMDGIWKYK Y
001: MEENLPPGFR FHPTDEELIT HYLCRKVSDI GFTGKAVVDV DLNKCEPWDL PAKASMGEKE WYFFSQRDRK YPTGLRTNRA TEAGYWKTTG KDKEIYRSGV
101: LVGMKKTLVF YKGRAPKGEK SNWVMHEYRL ESKQPFNPTN KEEWVVCRVF EKSTAAKKAQ EQQPQSSQPS FGSPCDANSS MANEFEDIDE LPNLNSNSST
201: IDYNNHIHQY SQRNVYSEDN TTSTAGLNMN MNMASTNLQS WTTSLLGPPL SPINSLLLKA FQIRNSYSFP KEMIPSFNHS SLQQGVSNMI QNASSSSQVQ
301: PQPQEEAFNM DSIW
101: LVGMKKTLVF YKGRAPKGEK SNWVMHEYRL ESKQPFNPTN KEEWVVCRVF EKSTAAKKAQ EQQPQSSQPS FGSPCDANSS MANEFEDIDE LPNLNSNSST
201: IDYNNHIHQY SQRNVYSEDN TTSTAGLNMN MNMASTNLQS WTTSLLGPPL SPINSLLLKA FQIRNSYSFP KEMIPSFNHS SLQQGVSNMI QNASSSSQVQ
301: PQPQEEAFNM DSIW
Arabidopsis Description
anac058NAC domain containing protein 58 [Source:UniProtKB/TrEMBL;Acc:Q9LS50]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.