Factsheet for TraesCS7D01G543500.2

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
endoplasmic reticulum 6
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G195400.4
TraesCS1B01G210300.4
TraesCS1D01G199200.1
TraesCS4A01G321300.1
TraesCS5B01G557500.2
TraesCS5D01G551800.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G04060.1	TraesCS1A01G195400.4	AT1G32230.1	19548978
AT3G04060.1	TraesCS1B01G210300.4	AT1G32230.1	19548978
AT3G04060.1	TraesCS1D01G199200.1	AT1G32230.1	19548978
AT3G04060.1	TraesCS4A01G321300.1	AT1G32230.1	19548978
AT3G04060.1	TraesCS5B01G557500.2	AT1G32230.1	19548978
AT3G04060.1	TraesCS5D01G551800.3	AT1G32230.1	19548978

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G569100.1	Wheat	nucleus	95.26	95.26
TraesCS7B01G489500.2	Wheat	cytosol	85.0	93.08
HORVU7Hr1G122680.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	80.79	82.97
TraesCS7D01G543400.1	Wheat	nucleus	70.0	78.24
TraesCS7D01G154200.1	Wheat	nucleus	56.84	60.67
TraesCS7D01G196300.1	Wheat	cytosol, nucleus, peroxisome	54.47	59.31
TraesCS7D01G189900.1	Wheat	nucleus	50.26	59.13
EES02626	Sorghum	cytosol	20.53	54.55
CDY29982	Canola	cytosol	24.47	54.07
TraesCS3D01G078500.1	Wheat	nucleus	30.79	52.0
GSMUA_Achr10P...	Banana	cytosol	30.0	50.0
GSMUA_Achr5P07600_001	Banana	cytosol	30.53	47.15
Os01t0104500-01	Rice	cytosol, mitochondrion, nucleus	36.84	43.75
Os01t0393100-01	Rice	nucleus	35.79	41.46
GSMUA_Achr7P18330_001	Banana	nucleus	32.89	40.58
GSMUA_Achr9P16920_001	Banana	cytosol	32.63	40.52
TraesCS4D01G071200.1	Wheat	cytosol, mitochondrion, nucleus	31.32	39.8
GSMUA_Achr3P09520_001	Banana	cytosol	32.63	38.99
GSMUA_Achr3P18020_001	Banana	nucleus	29.47	38.23
GSMUA_Achr6P08600_001	Banana	nucleus	34.47	37.75
GSMUA_Achr6P32290_001	Banana	nucleus	33.95	37.28
TraesCS4D01G176000.1	Wheat	nucleus	33.42	37.13
TraesCS2D01G100800.1	Wheat	nucleus	26.84	36.96
CDX70804	Canola	nucleus	30.79	34.72
CDY02636	Canola	nucleus	30.79	34.72
TraesCS7D01G246100.1	Wheat	cytosol	30.53	34.63
Bra023669.1-P	Field mustard	nucleus	30.53	34.52
Bra006449.1-P	Field mustard	nucleus	30.53	34.52
CDY53250	Canola	nucleus	30.53	34.52
CDY51238	Canola	nucleus	30.53	34.42
TraesCS5D01G283200.1	Wheat	mitochondrion, nucleus, plastid	32.89	34.34
AT5G18270.1	Thale cress	nucleus	30.0	34.03
Zm00001d040189_P002	Maize	mitochondrion, nucleus, peroxisome	35.0	34.02
TraesCS2D01G100900.1	Wheat	nucleus	31.05	33.43
Bra002148.1-P	Field mustard	nucleus	29.47	33.33
KXG28945	Sorghum	cytoskeleton, nucleus, peroxisome	32.37	33.15
AT3G04060.1	Thale cress	nucleus	29.47	33.14
TraesCS2D01G462900.1	Wheat	cytosol, nucleus, plastid	25.26	32.88
CDY42901	Canola	nucleus	29.74	32.85
TraesCS5D01G059700.2	Wheat	cytosol, nucleus, peroxisome	26.05	32.67
CDY50879	Canola	cytoskeleton, cytosol, nucleus	29.47	32.65
TraesCS7D01G302000.1	Wheat	cytosol	25.0	32.65
Bra031950.1-P	Field mustard	cytoskeleton, cytosol, nucleus	29.47	32.56
OQU89451	Sorghum	cytosol	31.84	32.53
KRG94783	Soybean	nucleus	34.21	32.1
Bra040153.1-P	Field mustard	nucleus	28.95	32.07
TraesCS2D01G324700.1	Wheat	nucleus	29.74	32.01
EES02651	Sorghum	nucleus	33.68	32.0
TraesCS7D01G452500.1	Wheat	nucleus	25.79	31.82
EES17917	Sorghum	cytosol	33.42	31.59
TraesCS2D01G100600.1	Wheat	cytosol, nucleus, plastid	30.53	31.52
TraesCS7D01G451700.1	Wheat	nucleus	25.79	31.41
Zm00001d008403_P001	Maize	plastid	26.58	31.37
KRH06738	Soybean	nucleus	33.42	31.2
VIT_08s0007g07640.t01	Wine grape	nucleus	32.89	31.02
KRH08479	Soybean	nucleus	33.42	30.98
KRH70130	Soybean	nucleus	32.63	30.24
TraesCS6D01G362900.1	Wheat	nucleus	23.68	29.7
TraesCS5D01G148900.1	Wheat	nucleus	31.32	29.6
TraesCS7D01G342300.1	Wheat	nucleus	27.63	29.01
TraesCS6D01G362800.1	Wheat	nucleus	22.89	27.88
TraesCS2D01G378800.1	Wheat	cytosol, endoplasmic reticulum, nucleus	22.89	27.62
TraesCS2D01G100700.1	Wheat	cytosol, endoplasmic reticulum, nucleus	30.79	27.4
GSMUA_Achr8P21470_001	Banana	nucleus	36.05	26.55

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR31744	PANTHER:PTHR31744:SF23	SUPFAM:SSF101941	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS7D01G543500	EnsemblPlants:TraesCS7D01G543500.2
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:631933960..631935669

Molecular Weight (calculated)

42844.6 Da

IEP (calculated)

8.230

GRAVY (calculated)

-0.436

Length

380 amino acids

Sequence
(BLAST)

001: MDIPSSLISS ILIFMVASNI TITPESIAHK ASTMADHLQI QQKQLVLPPG FRFHPTDEEI IKFYVVPKVL DEAFVVAAIE DVNLNKYEPW ELPEKAKMGE
101: KEWYFYSRKD RKYPTGIRTN RATEAGYWKA TGKDKEIFQP PFTLIGMKKT LVFYKGRAPR GEKTNWIMHE YRLESNKKLT SNPSITTRTV TRTNTASKEQ
201: WVVCRIFHKS TGLKKMVTPS YNMPMYTGAE HQQAFVDLDT LPPLMEYDMS STCAHAPLFP GASSYKSHDV GTGSSMMGSV ALPMMNYHYI GNNHHHQMMA
301: NPTLPLSLYQ HQQQHQQMMM HMGADQGLMV GAQPGSGLAS MLSQEDTVAG LRNNYPGNTA TTAVGETSLM NMGMDDIWQN

Best Arabidopsis Sequence Match ( AT2G24430.1 )
(BLAST)

001: MEQGDHQQHK KEEEALPPGF RFHPTDEELI SYYLVNKIAD QNFTGKAIAD VDLNKSEPWE LPEKAKMGGK EWYFFSLRDR KYPTGVRTNR ATNTGYWKTT
101: GKDKEIFNST TSELVGMKKT LVFYRGRAPR GEKTCWVMHE YRLHSKSSYR TSKQDEWVVC RVFKKTEATK KYISTSSSST SHHHNNHTRA SILSTNNNNP
201: NYSSDLLQLP PHLQPHPSLN INQSLMANAV HLAELSRVFR ASTSTTMDSS HQQLMNYTHM PVSGLNLNLG GALVQPPPVV SLEDVAAVSA SYNGENGFGN
301: VEMSQCMDLD GYWPSY

Arabidopsis Description

ANAC038NAC domain containing protein 38 [Source:UniProtKB/TrEMBL;Acc:Q9ZQ25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.