Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G143100.1 | Wheat | nucleus | 96.27 | 96.03 |
| TraesCS5B01G141900.1 | Wheat | nucleus | 95.02 | 95.26 |
| HORVU5Hr1G045640.7 | Barley | mitochondrion | 94.03 | 83.08 |
| Zm00001d005028_P001 | Maize | cytosol | 42.54 | 53.11 |
| CDY29982 | Canola | cytosol | 22.14 | 51.74 |
| EES07908 | Sorghum | nucleus, peroxisome, plastid | 47.51 | 48.11 |
| Os12t0123800-01 | Rice | nucleus | 46.77 | 47.47 |
| GSMUA_Achr10P... | Banana | cytosol | 26.37 | 46.49 |
| Zm00001d052390_P001 | Maize | nucleus | 42.79 | 46.36 |
| GSMUA_Achr5P07600_001 | Banana | cytosol | 27.61 | 45.12 |
| TraesCS3D01G078500.1 | Wheat | nucleus | 24.63 | 44.0 |
| GSMUA_Achr7P18330_001 | Banana | nucleus | 31.59 | 41.23 |
| Os11t0127000-01 | Rice | nucleus | 28.86 | 39.32 |
| TraesCS2D01G100800.1 | Wheat | nucleus | 26.87 | 39.13 |
| GSMUA_Achr9P16920_001 | Banana | cytosol | 29.6 | 38.89 |
| GSMUA_Achr3P18020_001 | Banana | nucleus | 27.86 | 38.23 |
| TraesCS4D01G176000.1 | Wheat | nucleus | 32.09 | 37.72 |
| TraesCS4D01G071200.1 | Wheat | cytosol, mitochondrion, nucleus | 27.86 | 37.46 |
| AT5G18270.1 | Thale cress | nucleus | 29.85 | 35.82 |
| GSMUA_Achr6P08600_001 | Banana | nucleus | 30.85 | 35.73 |
| GSMUA_Achr6P32290_001 | Banana | nucleus | 30.6 | 35.55 |
| GSMUA_Achr3P09520_001 | Banana | cytosol | 28.11 | 35.53 |
| CDY53250 | Canola | nucleus | 29.6 | 35.42 |
| Bra023669.1-P | Field mustard | nucleus | 29.6 | 35.42 |
| CDY02636 | Canola | nucleus | 29.6 | 35.31 |
| CDX70804 | Canola | nucleus | 29.6 | 35.31 |
| Bra006449.1-P | Field mustard | nucleus | 29.35 | 35.12 |
| Bra002148.1-P | Field mustard | nucleus | 29.35 | 35.12 |
| CDY51238 | Canola | nucleus | 29.35 | 35.01 |
| TraesCS7D01G196300.1 | Wheat | cytosol, nucleus, peroxisome | 30.35 | 34.96 |
| TraesCS7D01G189900.1 | Wheat | nucleus | 27.86 | 34.67 |
| TraesCS7D01G543400.1 | Wheat | nucleus | 29.1 | 34.41 |
| TraesCS7D01G154200.1 | Wheat | nucleus | 30.35 | 34.27 |
| AT3G04060.1 | Thale cress | nucleus | 28.61 | 34.02 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 28.86 | 33.82 |
| Bra031950.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 28.86 | 33.72 |
| Bra040153.1-P | Field mustard | nucleus | 28.61 | 33.53 |
| TraesCS7D01G302000.1 | Wheat | cytosol | 24.13 | 33.33 |
| TraesCS5D01G283200.1 | Wheat | mitochondrion, nucleus, plastid | 30.1 | 33.24 |
| TraesCS2D01G100900.1 | Wheat | nucleus | 29.1 | 33.14 |
| CDY42901 | Canola | nucleus | 28.11 | 32.85 |
| TraesCS7D01G452500.1 | Wheat | nucleus | 25.12 | 32.79 |
| TraesCS7D01G342300.1 | Wheat | nucleus | 29.35 | 32.6 |
| KRG94783 | Soybean | nucleus | 32.84 | 32.59 |
| TraesCS2D01G100600.1 | Wheat | cytosol, nucleus, plastid | 29.6 | 32.34 |
| VIT_08s0007g07640.t01 | Wine grape | nucleus | 32.34 | 32.26 |
| KRH06738 | Soybean | nucleus | 32.59 | 32.19 |
| TraesCS7D01G451700.1 | Wheat | nucleus | 24.63 | 31.73 |
| TraesCS7D01G246100.1 | Wheat | cytosol | 26.12 | 31.34 |
| TraesCS7D01G543500.2 | Wheat | endoplasmic reticulum | 29.6 | 31.32 |
| TraesCS2D01G462900.1 | Wheat | cytosol, nucleus, plastid | 22.64 | 31.16 |
| TraesCS2D01G324700.1 | Wheat | nucleus | 27.36 | 31.16 |
| TraesCS5D01G059700.2 | Wheat | cytosol, nucleus, peroxisome | 23.38 | 31.02 |
| KRH70130 | Soybean | nucleus | 30.85 | 30.24 |
| KRH08479 | Soybean | nucleus | 30.35 | 29.76 |
| TraesCS6D01G362900.1 | Wheat | nucleus | 21.64 | 28.71 |
| TraesCS2D01G378800.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 22.14 | 28.25 |
| TraesCS2D01G100700.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 29.35 | 27.63 |
| TraesCS6D01G362800.1 | Wheat | nucleus | 20.65 | 26.6 |
| GSMUA_Achr8P21470_001 | Banana | nucleus | 32.09 | 25.0 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31744 | PANTHER:PTHR31744:SF23 | SUPFAM:SSF101941 | EnsemblPlantsGene:TraesCS5D01G148900 | EnsemblPlants:TraesCS5D01G148900.1 | SEG:seg |
Description
No Description!
Coordinates
chr5D:+:238072946..238074635
Molecular Weight (calculated)
43702.0 Da
IEP (calculated)
6.527
GRAVY (calculated)
-0.556
Length
402 amino acids
Sequence
(BLAST)
(BLAST)
001: MVESVAASPS EEQGRGGGLS LPPGFRFHPT DEEIITSYLL RKFLDPSFVS RAVGEVDLNS CEPRDLPGKA NMGEKEWYFF VHKDLKYPTG SRANRATKEG
101: YWKATGKDRE IFKPRARELV GMKKTLVFYT GRAPRGAKSE WVMHEFRLEG KSRGQTMNNP KDEWVVCKVF NKKGEAKATR AADVDAEYSA VTTPNASSVV
201: DAGEGAGDFT DSMFTIDPLC YIPNSDEYTS NQLPAKTTTT TTTNSAAPPY NADYYYPSVP TTAGSFNVMS NYSLTNAPSN AQTSTAMASS VPATSGSSWQ
301: HMLMNTAPHG MMGRRSYDVN LHEQQAIMLR ALGGVVGAQN FGEPEKGLQL PSPAVTAGSV LPQQGKLGSY DDGEFPYGNY DLASAAMNGR PAADNNLGAR
401: FY
101: YWKATGKDRE IFKPRARELV GMKKTLVFYT GRAPRGAKSE WVMHEFRLEG KSRGQTMNNP KDEWVVCKVF NKKGEAKATR AADVDAEYSA VTTPNASSVV
201: DAGEGAGDFT DSMFTIDPLC YIPNSDEYTS NQLPAKTTTT TTTNSAAPPY NADYYYPSVP TTAGSFNVMS NYSLTNAPSN AQTSTAMASS VPATSGSSWQ
301: HMLMNTAPHG MMGRRSYDVN LHEQQAIMLR ALGGVVGAQN FGEPEKGLQL PSPAVTAGSV LPQQGKLGSY DDGEFPYGNY DLASAAMNGR PAADNNLGAR
401: FY
001: MEENLPPGFR FHPTDEELIT HYLCRKVSDI GFTGKAVVDV DLNKCEPWDL PAKASMGEKE WYFFSQRDRK YPTGLRTNRA TEAGYWKTTG KDKEIYRSGV
101: LVGMKKTLVF YKGRAPKGEK SNWVMHEYRL ESKQPFNPTN KEEWVVCRVF EKSTAAKKAQ EQQPQSSQPS FGSPCDANSS MANEFEDIDE LPNLNSNSST
201: IDYNNHIHQY SQRNVYSEDN TTSTAGLNMN MNMASTNLQS WTTSLLGPPL SPINSLLLKA FQIRNSYSFP KEMIPSFNHS SLQQGVSNMI QNASSSSQVQ
301: PQPQEEAFNM DSIW
101: LVGMKKTLVF YKGRAPKGEK SNWVMHEYRL ESKQPFNPTN KEEWVVCRVF EKSTAAKKAQ EQQPQSSQPS FGSPCDANSS MANEFEDIDE LPNLNSNSST
201: IDYNNHIHQY SQRNVYSEDN TTSTAGLNMN MNMASTNLQS WTTSLLGPPL SPINSLLLKA FQIRNSYSFP KEMIPSFNHS SLQQGVSNMI QNASSSSQVQ
301: PQPQEEAFNM DSIW
Arabidopsis Description
anac058NAC domain containing protein 58 [Source:UniProtKB/TrEMBL;Acc:Q9LS50]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.