Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G246300.1 | Wheat | nucleus | 97.79 | 97.79 |
| TraesCS7A01G334800.1 | Wheat | nucleus | 96.13 | 95.87 |
| HORVU7Hr1G082420.2 | Barley | nucleus | 95.86 | 88.52 |
| Os06t0344900-00 | Rice | cytosol, nucleus, plastid | 72.1 | 69.97 |
| Zm00001d035266_P001 | Maize | nucleus | 67.4 | 68.35 |
| Zm00001d041791_P001 | Maize | nucleus | 63.54 | 62.5 |
| KXG23228 | Sorghum | plastid | 72.93 | 59.46 |
| KRH27280 | Soybean | nucleus | 43.37 | 45.77 |
| GSMUA_Achr10P... | Banana | cytosol | 44.2 | 45.07 |
| VIT_19s0014g02200.t01 | Wine grape | nucleus | 44.75 | 44.63 |
| GSMUA_Achr10P... | Banana | nucleus | 40.88 | 44.58 |
| KRH22042 | Soybean | nucleus | 43.09 | 44.32 |
| CDX75813 | Canola | nucleus | 37.29 | 43.83 |
| Bra001586.1-P | Field mustard | nucleus | 37.29 | 43.69 |
| CDX82444 | Canola | nucleus | 37.29 | 43.69 |
| TraesCS3D01G078500.1 | Wheat | nucleus | 27.07 | 43.56 |
| KRH55187 | Soybean | nucleus | 44.48 | 42.93 |
| Solyc07g062840.2.1 | Tomato | nucleus | 41.71 | 42.9 |
| CDY32316 | Canola | nucleus | 36.19 | 42.67 |
| AT3G15170.1 | Thale cress | nucleus | 36.46 | 42.58 |
| CDY20103 | Canola | nucleus | 35.64 | 42.57 |
| Bra021592.1-P | Field mustard | nucleus | 35.64 | 42.57 |
| KRH26232 | Soybean | nucleus | 42.82 | 42.35 |
| TraesCS4D01G071200.1 | Wheat | cytosol, mitochondrion, nucleus | 34.53 | 41.81 |
| CDY28805 | Canola | nucleus | 41.44 | 40.87 |
| Bra022685.1-P | Field mustard | nucleus | 41.44 | 40.87 |
| Bra003023.1-P | Field mustard | nucleus | 40.06 | 40.62 |
| CDX96262 | Canola | nucleus | 41.16 | 40.6 |
| AT5G53950.1 | Thale cress | nucleus | 41.71 | 40.27 |
| CDX99695 | Canola | mitochondrion | 28.45 | 37.73 |
| CDX98529 | Canola | mitochondrion | 28.45 | 37.73 |
| PGSC0003DMT400032280 | Potato | nucleus | 28.73 | 36.24 |
| TraesCS5D01G059700.2 | Wheat | cytosol, nucleus, peroxisome | 30.11 | 35.97 |
| TraesCS7D01G302000.1 | Wheat | cytosol | 28.73 | 35.74 |
| TraesCS2D01G100800.1 | Wheat | nucleus | 27.07 | 35.51 |
| TraesCS5D01G283200.1 | Wheat | mitochondrion, nucleus, plastid | 35.64 | 35.44 |
| TraesCS4D01G176000.1 | Wheat | nucleus | 33.15 | 35.09 |
| TraesCS7D01G452500.1 | Wheat | nucleus | 29.56 | 34.74 |
| TraesCS2D01G462900.1 | Wheat | cytosol, nucleus, plastid | 27.35 | 33.9 |
| TraesCS7D01G246100.1 | Wheat | cytosol | 30.66 | 33.13 |
| TraesCS7D01G451700.1 | Wheat | nucleus | 28.45 | 33.01 |
| TraesCS7D01G154200.1 | Wheat | nucleus | 32.04 | 32.58 |
| TraesCS7D01G196300.1 | Wheat | cytosol, nucleus, peroxisome | 30.94 | 32.09 |
| TraesCS6D01G362900.1 | Wheat | nucleus | 26.8 | 32.01 |
| TraesCS2D01G324700.1 | Wheat | nucleus | 30.94 | 31.73 |
| TraesCS2D01G100900.1 | Wheat | nucleus | 30.66 | 31.44 |
| TraesCS2D01G378800.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 27.35 | 31.43 |
| TraesCS7D01G189900.1 | Wheat | nucleus | 27.9 | 31.27 |
| TraesCS7D01G543400.1 | Wheat | nucleus | 29.28 | 31.18 |
| TraesCS6D01G362800.1 | Wheat | nucleus | 26.8 | 31.09 |
| TraesCS2D01G100600.1 | Wheat | cytosol, nucleus, plastid | 30.66 | 30.16 |
| TraesCS5D01G148900.1 | Wheat | nucleus | 32.6 | 29.35 |
| TraesCS7D01G543500.2 | Wheat | endoplasmic reticulum | 29.01 | 27.63 |
| TraesCS2D01G100700.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 30.66 | 26.0 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31744 | PANTHER:PTHR31744:SF48 | SUPFAM:SSF101941 | EnsemblPlantsGene:TraesCS7D01G342300 | EnsemblPlants:TraesCS7D01G342300.1 | SEG:seg |
Description
No Description!
Coordinates
chr7D:+:438368209..438370708
Molecular Weight (calculated)
38886.0 Da
IEP (calculated)
8.534
GRAVY (calculated)
-0.346
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MERYGSLGMR LDGGGGDLPP GFRFHPTDEE LITYYLLRKV VDCGFSGARA IAEIDLNKCE PWELPDKACK TTAEKEWYFY SLRDRKYPTG LRTNRATGAG
101: YWKATGKDRE IRSARNGALV GMKKTLVFYR GRAPKGQKTQ WVMHEFRLEG VYAYHFLPNN TTRDEWVIAK IFVKPGAVPP SRKVRYGLSS AGDTSCFSDS
201: TSVSIGGGGG ASASSAPRQQ LPDTSSLLAA AHAAADGESS SYGAAANNNA AGNCRELVPC FSTAHMDATL LGIGQYEPAT LAVEQPLAFF HGSRLVQAAD
301: NLSLPMFLPG GLQSGVSPLG MGGGAFQHWP SSGYDMKLEG SRAPPQMAVG PGQLDGAYGW GF
101: YWKATGKDRE IRSARNGALV GMKKTLVFYR GRAPKGQKTQ WVMHEFRLEG VYAYHFLPNN TTRDEWVIAK IFVKPGAVPP SRKVRYGLSS AGDTSCFSDS
201: TSVSIGGGGG ASASSAPRQQ LPDTSSLLAA AHAAADGESS SYGAAANNNA AGNCRELVPC FSTAHMDATL LGIGQYEPAT LAVEQPLAFF HGSRLVQAAD
301: NLSLPMFLPG GLQSGVSPLG MGGGAFQHWP SSGYDMKLEG SRAPPQMAVG PGQLDGAYGW GF
001: MDVDVFNGWG RPRFEDESLM PPGFRFHPTD EELITYYLLK KVLDSNFSCA AISQVDLNKS EPWELPEKAK MGEKEWYFFT LRDRKYPTGL RTNRATEAGY
101: WKATGKDREI KSSKTKSLLG MKKTLVFYKG RAPKGEKSCW VMHEYRLDGK FSYHYISSSA KDEWVLCKVC LKSGVVSRET NLISSSSSSA VTGEFSSAGS
201: AIAPIINTFA TEHVSCFSNN SAAHTDASFH TFLPAPPPSL PPRQPRHVGD GVAFGQFLDL GSSGQIDFDA AAAAFFPNLP SLPPTVLPPP PSFAMYGGGS
301: PAVSVWPFTL
101: WKATGKDREI KSSKTKSLLG MKKTLVFYKG RAPKGEKSCW VMHEYRLDGK FSYHYISSSA KDEWVLCKVC LKSGVVSRET NLISSSSSSA VTGEFSSAGS
201: AIAPIINTFA TEHVSCFSNN SAAHTDASFH TFLPAPPPSL PPRQPRHVGD GVAFGQFLDL GSSGQIDFDA AAAAFFPNLP SLPPTVLPPP PSFAMYGGGS
301: PAVSVWPFTL
Arabidopsis Description
NAC054CUC1 [Source:UniProtKB/TrEMBL;Acc:A0A178V703]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.