Factsheet for Bra001586.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82444	Canola	nucleus	99.03	99.03
CDX75813	Canola	nucleus	98.38	98.7
Bra021592.1-P	Field mustard	nucleus	82.85	84.49
AT3G15170.1	Thale cress	nucleus	82.2	81.94
Bra009246.1-P	Field mustard	nucleus	42.72	46.64
KRH27280	Soybean	nucleus	50.16	45.19
KRH22042	Soybean	nucleus	51.13	44.89
VIT_19s0014g02200.t01	Wine grape	nucleus	51.13	43.53
Bra028685.1-P	Field mustard	nucleus	44.01	43.31
Bra028435.1-P	Field mustard	nucleus	39.81	42.71
Solyc07g062840.2.1	Tomato	nucleus	48.54	42.61
Bra025658.1-P	Field mustard	nucleus	39.16	41.87
Bra037585.1-P	Field mustard	nucleus	40.45	41.67
Bra012960.1-P	Field mustard	nucleus	44.01	41.59
GSMUA_Achr10P...	Banana	nucleus	44.66	41.57
Bra022685.1-P	Field mustard	nucleus	49.19	41.42
KRH26232	Soybean	nucleus	48.87	41.26
Bra003023.1-P	Field mustard	nucleus	47.57	41.18
Bra001705.1-P	Field mustard	nucleus	39.81	41.14
Bra022319.1-P	Field mustard	nucleus	40.78	41.04
Bra029313.1-P	Field mustard	nucleus	43.04	40.92
KRH55187	Soybean	nucleus	49.19	40.53
Zm00001d035266_P001	Maize	nucleus	44.98	38.94
Bra032095.1-P	Field mustard	nucleus	39.81	38.8
Bra007855.1-P	Field mustard	nucleus	39.16	38.17
PGSC0003DMT400032280	Potato	nucleus	34.95	37.63
Bra025374.1-P	Field mustard	cytoskeleton, cytosol, nucleus	37.54	37.54
Os06t0344900-00	Rice	cytosol, nucleus, plastid	45.31	37.53
TraesCS7D01G342300.1	Wheat	nucleus	43.69	37.29
Bra036223.1-P	Field mustard	nucleus	39.48	37.2
TraesCS7B01G246300.1	Wheat	nucleus	43.37	37.02
TraesCS7A01G334800.1	Wheat	nucleus	43.37	36.91
Bra001480.1-P	Field mustard	nucleus	32.69	36.46
Bra034713.1-P	Field mustard	nucleus	32.36	36.36
Bra002148.1-P	Field mustard	nucleus	39.48	36.31
Zm00001d041791_P001	Maize	nucleus	42.72	35.87
Bra031950.1-P	Field mustard	cytoskeleton, cytosol, nucleus	39.81	35.76
Bra023669.1-P	Field mustard	nucleus	38.84	35.71
Bra006449.1-P	Field mustard	nucleus	37.86	34.82
Bra040153.1-P	Field mustard	nucleus	38.19	34.4
Bra008259.1-P	Field mustard	cytosol	35.6	34.38
Bra015750.1-P	Field mustard	cytosol	36.57	33.73
HORVU7Hr1G082420.2	Barley	nucleus	42.72	33.67
Bra030820.1-P	Field mustard	nucleus	33.66	32.4
KXG23228	Sorghum	plastid	45.63	31.76
Bra011037.1-P	Field mustard	nucleus	27.18	24.42
Bra024194.1-P	Field mustard	nucleus	27.51	24.22
Bra010362.1-P	Field mustard	nucleus	27.18	24.21

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EnsemblPlantsGene:Bra001586	EnsemblPlants:Bra001586.1	EnsemblPlants:Bra001586.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	UniProt:M4CBK6	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31744	PANTHER:PTHR31744:SF22	SUPFAM:SSF101941
UniParc:UPI0002540A38	SEG:seg	:	:	:	:

Description

AT3G15170 (E=6e-124) CUC1, anac054, ATNAC1 | CUC1 (CUP-SHAPED COTYLEDON1); transcription factor

Coordinates

chrA03:+:17211161..17212718

Molecular Weight (calculated)

34172.3 Da

IEP (calculated)

7.808

GRAVY (calculated)

-0.368

Length

309 amino acids

Sequence
(BLAST)

001: MDMDVFNGWE RSRYEDETVM PPGFRFHPTD EELITYYLLK KVLDSSFSCA AISQVDLNKS EPWELPEKAK MGEKEWYFFT LRDRKYPTGL RTNRATEAGY
101: WKATGKDREI KSSKTNSLLG MKKTLVFYKG RAPKGEKSCW VMHEYRLDGK FSYHYITSSA KDEWVLSKVC LKSSVVSRET KLISSSGGVN CSSSSSSAGS
201: LIAPMIDAYA TEHVSCFSNT SAAHADASFP PAYLPAPPPP PSLPRQPRCF GDDVAFGQFM DVGASGQFSI DAAFLPNLPS LPPTVFTTPS QPFGVYGGGS
301: AVSSWPFAL

Best Arabidopsis Sequence Match ( AT3G15170.1 )
(BLAST)

001: MDVDVFNGWG RPRFEDESLM PPGFRFHPTD EELITYYLLK KVLDSNFSCA AISQVDLNKS EPWELPEKAK MGEKEWYFFT LRDRKYPTGL RTNRATEAGY
101: WKATGKDREI KSSKTKSLLG MKKTLVFYKG RAPKGEKSCW VMHEYRLDGK FSYHYISSSA KDEWVLCKVC LKSGVVSRET NLISSSSSSA VTGEFSSAGS
201: AIAPIINTFA TEHVSCFSNN SAAHTDASFH TFLPAPPPSL PPRQPRHVGD GVAFGQFLDL GSSGQIDFDA AAAAFFPNLP SLPPTVLPPP PSFAMYGGGS
301: PAVSVWPFTL

Arabidopsis Description

NAC054CUC1 [Source:UniProtKB/TrEMBL;Acc:A0A178V703]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.