Factsheet for Bra008259.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45986	Canola	cytosol	98.75	98.75
Bra015750.1-P	Field mustard	cytosol	90.62	86.57
AT1G76420.1	Thale cress	cytosol	86.25	82.63
GSMUA_Achr9P20090_001	Banana	cytosol	42.81	43.22
KRH60880	Soybean	nucleus	46.88	42.86
Bra009246.1-P	Field mustard	nucleus	36.88	41.7
Bra025658.1-P	Field mustard	nucleus	37.19	41.18
Bra028435.1-P	Field mustard	nucleus	36.88	40.97
KRH51562	Soybean	nucleus	46.56	39.84
Bra028685.1-P	Field mustard	nucleus	38.75	39.49
Bra001705.1-P	Field mustard	nucleus	36.88	39.46
Bra037585.1-P	Field mustard	nucleus	35.94	38.33
Bra022319.1-P	Field mustard	nucleus	36.56	38.11
EES14261	Sorghum	nucleus	40.31	37.83
TraesCS7B01G143900.1	Wheat	nucleus	39.38	37.72
Bra012960.1-P	Field mustard	nucleus	38.44	37.61
TraesCS7D01G246100.1	Wheat	cytosol	39.38	37.61
PGSC0003DMT400025690	Potato	nucleus	41.56	37.46
TraesCS7A01G247600.1	Wheat	extracellular	39.38	37.39
Bra029313.1-P	Field mustard	nucleus	37.19	36.62
Os08t0511200-00	Rice	cytosol	39.69	36.6
Bra036223.1-P	Field mustard	nucleus	37.19	36.28
VIT_18s0122g00800.t01	Wine grape	nucleus	47.5	35.76
Bra021592.1-P	Field mustard	nucleus	33.75	35.64
Bra025374.1-P	Field mustard	cytoskeleton, cytosol, nucleus	34.38	35.6
Bra001586.1-P	Field mustard	nucleus	34.38	35.6
Bra032095.1-P	Field mustard	nucleus	35.0	35.33
Bra007855.1-P	Field mustard	nucleus	34.69	35.02
Bra003023.1-P	Field mustard	nucleus	39.06	35.01
Bra022685.1-P	Field mustard	nucleus	39.69	34.6
Bra034713.1-P	Field mustard	nucleus	29.69	34.55
Bra001480.1-P	Field mustard	nucleus	29.69	34.3
Bra023669.1-P	Field mustard	nucleus	35.62	33.93
Bra002148.1-P	Field mustard	nucleus	34.38	32.74
Bra006449.1-P	Field mustard	nucleus	34.06	32.44
Bra030820.1-P	Field mustard	nucleus	32.19	32.09
Bra031950.1-P	Field mustard	cytoskeleton, cytosol, nucleus	33.75	31.4
Bra040153.1-P	Field mustard	nucleus	33.12	30.9
Zm00001d031463_P002	Maize	mitochondrion	39.69	30.09
Bra011037.1-P	Field mustard	nucleus	28.12	26.16
Bra010362.1-P	Field mustard	nucleus	28.12	25.94
Bra024194.1-P	Field mustard	nucleus	28.12	25.64

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EnsemblPlantsGene:Bra008259	EnsemblPlants:Bra008259.1	EnsemblPlants:Bra008259.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	UniProt:M4CVL2	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31744	PANTHER:PTHR31744:SF49	SUPFAM:SSF101941
UniParc:UPI0002545F21	SEG:seg	:	:	:	:

Description

AT1G76420 (E=2e-127) CUC3, NAC368, ANAC031 | CUC3 (CUP SHAPED COTYLEDON3); transcription factor

Coordinates

chrA02:-:14158506..14160360

Molecular Weight (calculated)

36479.0 Da

IEP (calculated)

6.510

GRAVY (calculated)

-0.625

Length

320 amino acids

Sequence
(BLAST)

001: MLALEDVLSE LAGEVNDRGL PPGFRFHPTD EELITFYLAS KVFHGRLCGI HIAEVDLNRC EPWELPEMAK MGEREWYFYS LRDRKYPTGL RTNRATTAGY
101: WKATGKDKEI FSGGGGGALV GMKKTLVFYK GRAPRGLKSK WVMHEYRLET DLSHRHTCKE EWVMCRVFNK TGDRKNVGIH NQISYLHNTS LSTTHHHLET
201: LPSLLEPSKT PTNFPPLLYY DDTHQNYNNN LLHGISGHNV DELKALINPV VSQLNGVLFS PENNYYNNDE DDNFGVKTEQ YSNGGNNDLD VRDYLENPLF
301: QEAGYSLLGL SSSPGPRMLY

Best Arabidopsis Sequence Match ( AT1G76420.1 )
(BLAST)

001: MMLAVEDVLS ELAGEERNER GLPPGFRFHP TDEELITFYL ASKIFHGGLS GIHISEVDLN RCEPWELPEM AKMGEREWYF YSLRDRKYPT GLRTNRATTA
101: GYWKATGKDK EVFSGGGGQL VGMKKTLVFY KGRAPRGLKT KWVMHEYRLE NDHSHRHTCK EEWVICRVFN KTGDRKNVGL IHNQISYLHN HSLSTTHHHH
201: HEALPLLIEP SNKTLTNFPS LLYDDPHQNY NNNNFLHGSS GHNIDELKAL INPVVSQLNG IIFPSGNNNN DEDDFDFNLG VKTEQSSNGN EIDVRDYLEN
301: PLFQEASYGL LGFSSSPGPL HMLLDSPCPL GFQL

Arabidopsis Description

NAC031Protein CUP-SHAPED COTYLEDON 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9S851]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.