Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45986 | Canola | cytosol | 82.93 | 86.56 |
| Bra008259.1-P | Field mustard | cytosol | 82.63 | 86.25 |
| CDY20411 | Canola | cytosol | 82.34 | 85.67 |
| CDX87602 | Canola | cytosol | 84.73 | 84.48 |
| Bra015750.1-P | Field mustard | cytosol | 84.73 | 84.48 |
| CDX88273 | Canola | cytosol | 84.13 | 83.38 |
| KRH60880 | Soybean | nucleus | 46.41 | 44.29 |
| AT5G39610.1 | Thale cress | cytosol | 35.93 | 42.11 |
| GSMUA_Achr9P20090_001 | Banana | cytosol | 39.82 | 41.96 |
| KRH51562 | Soybean | nucleus | 46.41 | 41.44 |
| AT5G07680.1 | Thale cress | nucleus | 37.43 | 37.99 |
| PGSC0003DMT400025690 | Potato | nucleus | 40.12 | 37.75 |
| AT3G29035.1 | Thale cress | nucleus | 35.93 | 37.74 |
| EES14261 | Sorghum | nucleus | 38.32 | 37.54 |
| TraesCS7B01G143900.1 | Wheat | nucleus | 37.43 | 37.43 |
| TraesCS7D01G246100.1 | Wheat | cytosol | 37.43 | 37.31 |
| AT3G18400.1 | Thale cress | nucleus | 35.03 | 37.26 |
| AT5G61430.1 | Thale cress | nucleus | 37.43 | 37.2 |
| AT3G15170.1 | Thale cress | nucleus | 34.43 | 37.1 |
| TraesCS7A01G247600.1 | Wheat | extracellular | 37.43 | 37.09 |
| AT2G24430.1 | Thale cress | nucleus | 34.73 | 36.71 |
| Os08t0511200-00 | Rice | cytosol | 37.43 | 36.02 |
| VIT_18s0122g00800.t01 | Wine grape | nucleus | 44.91 | 35.29 |
| AT3G12977.1 | Thale cress | nucleus | 28.14 | 33.69 |
| AT5G53950.1 | Thale cress | nucleus | 37.72 | 33.6 |
| AT3G04060.1 | Thale cress | nucleus | 33.23 | 32.84 |
| AT5G18270.1 | Thale cress | nucleus | 32.93 | 32.84 |
| AT1G56010.2 | Thale cress | nucleus | 31.44 | 32.41 |
| Zm00001d031463_P002 | Maize | mitochondrion | 37.72 | 29.86 |
| AT4G28530.1 | Thale cress | nucleus | 29.04 | 27.56 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EntrezGene:843975 | UniProt:A0A178W1E7 | ProteinID:AAF16659.1 | ProteinID:AAG51953.1 |
| ProteinID:AAP82630.1 | ProteinID:AEE35839.1 | ArrayExpress:AT1G76420 | EnsemblPlantsGene:AT1G76420 | RefSeq:AT1G76420 | TAIR:AT1G76420 |
| RefSeq:AT1G76420-TAIR-G | EnsemblPlants:AT1G76420.1 | TAIR:AT1G76420.1 | Symbol:CUC3 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009653 | GO:GO:0009987 | GO:GO:0010014 | GO:GO:0010199 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | RefSeq:NP_177768.1 | ProteinID:OAP12339.1 |
| PFAM:PF02365 | PO:PO:0000037 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020100 | PO:PO:0025022 | PFscan:PS51005 |
| PANTHER:PTHR31744 | PANTHER:PTHR31744:SF49 | UniProt:Q9S851 | SUPFAM:SSF101941 | UniParc:UPI00000A6142 | SEG:seg |
Description
NAC031Protein CUP-SHAPED COTYLEDON 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9S851]
Coordinates
chr1:-:28671806..28674045
Molecular Weight (calculated)
38019.7 Da
IEP (calculated)
6.465
GRAVY (calculated)
-0.616
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MMLAVEDVLS ELAGEERNER GLPPGFRFHP TDEELITFYL ASKIFHGGLS GIHISEVDLN RCEPWELPEM AKMGEREWYF YSLRDRKYPT GLRTNRATTA
101: GYWKATGKDK EVFSGGGGQL VGMKKTLVFY KGRAPRGLKT KWVMHEYRLE NDHSHRHTCK EEWVICRVFN KTGDRKNVGL IHNQISYLHN HSLSTTHHHH
201: HEALPLLIEP SNKTLTNFPS LLYDDPHQNY NNNNFLHGSS GHNIDELKAL INPVVSQLNG IIFPSGNNNN DEDDFDFNLG VKTEQSSNGN EIDVRDYLEN
301: PLFQEASYGL LGFSSSPGPL HMLLDSPCPL GFQL
101: GYWKATGKDK EVFSGGGGQL VGMKKTLVFY KGRAPRGLKT KWVMHEYRLE NDHSHRHTCK EEWVICRVFN KTGDRKNVGL IHNQISYLHN HSLSTTHHHH
201: HEALPLLIEP SNKTLTNFPS LLYDDPHQNY NNNNFLHGSS GHNIDELKAL INPVVSQLNG IIFPSGNNNN DEDDFDFNLG VKTEQSSNGN EIDVRDYLEN
301: PLFQEASYGL LGFSSSPGPL HMLLDSPCPL GFQL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.