Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003023.1-P | Field mustard | nucleus | 81.6 | 85.71 |
| CDX96262 | Canola | nucleus | 83.73 | 85.56 |
| CDY28805 | Canola | nucleus | 83.2 | 85.01 |
| Bra022685.1-P | Field mustard | nucleus | 83.2 | 85.01 |
| KRH22042 | Soybean | nucleus | 54.67 | 58.24 |
| KRH27280 | Soybean | nucleus | 52.53 | 57.43 |
| Solyc07g062840.2.1 | Tomato | nucleus | 53.87 | 57.39 |
| VIT_19s0014g02200.t01 | Wine grape | nucleus | 54.13 | 55.92 |
| PGSC0003DMT400032280 | Potato | nucleus | 41.6 | 54.36 |
| KRH55187 | Soybean | nucleus | 52.8 | 52.8 |
| KRH26232 | Soybean | nucleus | 51.47 | 52.73 |
| AT3G15170.1 | Thale cress | nucleus | 40.27 | 48.71 |
| GSMUA_Achr10P... | Banana | nucleus | 42.13 | 47.59 |
| AT5G39610.1 | Thale cress | cytosol | 35.73 | 47.02 |
| Zm00001d035266_P001 | Maize | nucleus | 43.2 | 45.38 |
| AT3G18400.1 | Thale cress | nucleus | 36.53 | 43.63 |
| AT3G29035.1 | Thale cress | nucleus | 36.8 | 43.4 |
| Os06t0344900-00 | Rice | cytosol, nucleus, plastid | 42.93 | 43.16 |
| AT2G24430.1 | Thale cress | nucleus | 36.27 | 43.04 |
| AT5G07680.1 | Thale cress | nucleus | 37.6 | 42.86 |
| AT5G61430.1 | Thale cress | nucleus | 38.13 | 42.56 |
| TraesCS7A01G334800.1 | Wheat | nucleus | 40.53 | 41.87 |
| TraesCS7B01G246300.1 | Wheat | nucleus | 40.27 | 41.71 |
| TraesCS7D01G342300.1 | Wheat | nucleus | 40.27 | 41.71 |
| Zm00001d041791_P001 | Maize | nucleus | 40.27 | 41.03 |
| HORVU7Hr1G082420.2 | Barley | nucleus | 40.27 | 38.52 |
| AT5G18270.1 | Thale cress | nucleus | 34.4 | 38.51 |
| AT1G76420.1 | Thale cress | cytosol | 33.6 | 37.72 |
| AT3G04060.1 | Thale cress | nucleus | 33.87 | 37.57 |
| AT3G12977.1 | Thale cress | nucleus | 27.47 | 36.92 |
| KXG23228 | Sorghum | plastid | 42.93 | 36.26 |
| AT1G56010.2 | Thale cress | nucleus | 31.2 | 36.11 |
| AT4G28530.1 | Thale cress | nucleus | 26.13 | 27.84 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EntrezGene:835478 | ProteinID:AED96432.1 | ArrayExpress:AT5G53950 | EnsemblPlantsGene:AT5G53950 |
| RefSeq:AT5G53950 | TAIR:AT5G53950 | RefSeq:AT5G53950-TAIR-G | EnsemblPlants:AT5G53950.1 | TAIR:AT5G53950.1 | ProteinID:BAA19529.1 |
| ProteinID:BAB10725.1 | EMBL:BT030026 | Symbol:CUC2 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009653 | GO:GO:0009790 | GO:GO:0009791 |
| GO:GO:0009987 | GO:GO:0010072 | GO:GO:0010223 | GO:GO:0048366 | GO:GO:0090691 | GO:GO:0090709 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | RefSeq:NP_200206.1 | UniProt:O04017 |
| PFAM:PF02365 | PO:PO:0000037 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020100 | PO:PO:0020144 | PO:PO:0025022 |
| PFscan:PS51005 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF22 | SUPFAM:SSF101941 | UniParc:UPI00000A6ECB | SEG:seg |
Description
NAC098Protein CUP-SHAPED COTYLEDON 2 [Source:UniProtKB/Swiss-Prot;Acc:O04017]
Coordinates
chr5:-:21901704..21903854
Molecular Weight (calculated)
41436.4 Da
IEP (calculated)
8.522
GRAVY (calculated)
-0.487
Length
375 amino acids
Sequence
(BLAST)
(BLAST)
001: MDIPYYHYDH GGDSQYLPPG FRFHPTDEEL ITHYLLRKVL DGCFSSRAIA EVDLNKCEPW QLPGRAKMGE KEWYFFSLRD RKYPTGLRTN RATEAGYWKA
101: TGKDREIFSS KTCALVGMKK TLVFYKGRAP KGEKSNWVMH EYRLEGKFSY HFISRSSKDE WVISRVFQKT TLASTGAVSE GGGGGGATVS VSSGTGPSKK
201: TKVPSTISRN YQEQPSSPSS VSLPPLLDPT TTLGYTDSSC SYDSRSTNTT VTASAITEHV SCFSTVPTTT TALGLDVNSF SRLPPPLGFD FDPFPRFVSR
301: NVSTQSNFRS FQENFNQFPY FGSSSASTMT SAVNLPSFQG GGGVSGMNYW LPATAEENES KVGVLHAGLD CIWNY
101: TGKDREIFSS KTCALVGMKK TLVFYKGRAP KGEKSNWVMH EYRLEGKFSY HFISRSSKDE WVISRVFQKT TLASTGAVSE GGGGGGATVS VSSGTGPSKK
201: TKVPSTISRN YQEQPSSPSS VSLPPLLDPT TTLGYTDSSC SYDSRSTNTT VTASAITEHV SCFSTVPTTT TALGLDVNSF SRLPPPLGFD FDPFPRFVSR
301: NVSTQSNFRS FQENFNQFPY FGSSSASTMT SAVNLPSFQG GGGVSGMNYW LPATAEENES KVGVLHAGLD CIWNY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.