Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G246300.1 | Wheat | nucleus | 95.87 | 96.13 |
| TraesCS7D01G342300.1 | Wheat | nucleus | 95.87 | 96.13 |
| HORVU7Hr1G082420.2 | Barley | nucleus | 95.04 | 88.01 |
| Os06t0344900-00 | Rice | cytosol, nucleus, plastid | 71.9 | 69.97 |
| Zm00001d035266_P001 | Maize | nucleus | 67.77 | 68.91 |
| Zm00001d041791_P001 | Maize | nucleus | 62.53 | 61.68 |
| KXG23228 | Sorghum | plastid | 72.73 | 59.46 |
| KRH27280 | Soybean | nucleus | 43.25 | 45.77 |
| GSMUA_Achr10P... | Banana | cytosol | 44.08 | 45.07 |
| TraesCS3A01G077900.1 | Wheat | nucleus | 26.45 | 44.86 |
| GSMUA_Achr10P... | Banana | nucleus | 40.77 | 44.58 |
| KRH22042 | Soybean | nucleus | 42.98 | 44.32 |
| VIT_19s0014g02200.t01 | Wine grape | nucleus | 44.08 | 44.08 |
| CDX75813 | Canola | nucleus | 36.91 | 43.51 |
| CDX82444 | Canola | nucleus | 36.91 | 43.37 |
| Bra001586.1-P | Field mustard | nucleus | 36.91 | 43.37 |
| Solyc07g062840.2.1 | Tomato | nucleus | 41.6 | 42.9 |
| KRH55187 | Soybean | nucleus | 44.08 | 42.67 |
| CDY32316 | Canola | nucleus | 35.81 | 42.35 |
| AT3G15170.1 | Thale cress | nucleus | 36.09 | 42.26 |
| CDY20103 | Canola | nucleus | 35.26 | 42.24 |
| Bra021592.1-P | Field mustard | nucleus | 35.26 | 42.24 |
| KRH26232 | Soybean | nucleus | 42.42 | 42.08 |
| Bra022685.1-P | Field mustard | nucleus | 41.6 | 41.14 |
| CDY28805 | Canola | nucleus | 41.6 | 41.14 |
| Bra003023.1-P | Field mustard | nucleus | 40.22 | 40.9 |
| CDX96262 | Canola | nucleus | 41.32 | 40.87 |
| AT5G53950.1 | Thale cress | nucleus | 41.87 | 40.53 |
| TraesCS4A01G242700.1 | Wheat | cytosol, mitochondrion, nucleus | 33.33 | 40.47 |
| CDX98529 | Canola | mitochondrion | 28.37 | 37.73 |
| CDX99695 | Canola | mitochondrion | 28.37 | 37.73 |
| TraesCS2A01G101200.1 | Wheat | nucleus | 28.1 | 36.96 |
| PGSC0003DMT400032280 | Potato | nucleus | 28.65 | 36.24 |
| TraesCS5A01G049100.2 | Wheat | cytosol, nucleus, peroxisome | 30.03 | 35.62 |
| TraesCS4A01G130600.1 | Wheat | nucleus | 33.33 | 35.38 |
| TraesCS7A01G305200.1 | Wheat | cytosol | 28.1 | 35.29 |
| TraesCS5A01G275900.1 | Wheat | nucleus | 34.99 | 34.6 |
| TraesCS7A01G464100.1 | Wheat | nucleus | 28.93 | 34.2 |
| TraesCS7A01G464800.1 | Wheat | nucleus | 28.65 | 33.77 |
| TraesCS2A01G101100.1 | Wheat | cytosol, nucleus, plastid | 31.96 | 33.33 |
| TraesCS7A01G247600.1 | Wheat | extracellular | 30.85 | 33.23 |
| TraesCS2A01G382400.1 | Wheat | nucleus | 27.82 | 32.58 |
| TraesCS6A01G378600.1 | Wheat | nucleus | 27.27 | 32.35 |
| TraesCS7A01G152500.1 | Wheat | nucleus | 31.68 | 32.3 |
| TraesCS5A01G245900.2 | Wheat | nucleus | 28.93 | 32.01 |
| TraesCS6A01G378500.1 | Wheat | nucleus | 27.27 | 31.83 |
| TraesCS7A01G194700.1 | Wheat | nucleus | 30.58 | 31.81 |
| TraesCS2A01G101400.1 | Wheat | cytosol | 30.85 | 31.73 |
| TraesCS2A01G338300.1 | Wheat | nucleus | 30.58 | 31.27 |
| TraesCS7A01G189200.1 | Wheat | nucleus | 29.48 | 30.66 |
| TraesCS2A01G101000.1 | Wheat | cytosol, nucleus, plastid | 31.68 | 30.1 |
| TraesCS5A01G143100.1 | Wheat | nucleus | 32.78 | 29.53 |
| TraesCS7A01G569300.1 | Wheat | cytosol | 29.2 | 29.28 |
| TraesCS2A01G462500.1 | Wheat | plastid | 27.0 | 29.25 |
| TraesCS7A01G569100.1 | Wheat | nucleus | 28.93 | 27.63 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31744 | PANTHER:PTHR31744:SF48 | SUPFAM:SSF101941 | EnsemblPlantsGene:TraesCS7A01G334800 | EnsemblPlants:TraesCS7A01G334800.1 | SEG:seg |
Description
No Description!
Coordinates
chr7A:+:489163016..489164981
Molecular Weight (calculated)
39055.1 Da
IEP (calculated)
8.532
GRAVY (calculated)
-0.337
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MERYSALGMR LDGGGGDLPP GFRFHPTDEE LITYYLLRKV VDCGFSGARA IAEIDLNKCE PWELPDKACK TTTEKEWYFY SLRDRKYPTG LRTNRATGAG
101: YWKATGKDRE IRSARNGALV GMKKTLVFYR GRAPKGQKTQ WVMHEFRLEG VYAYHFLPNN TTRDEWVIAK IFVKPGAVPP SRKARYGLSS AGDTSCFSDS
201: TSVSIGGGGG ASASSAPRQH LPDTSSLLAA AQAAADGESS SYGATANNNN AAGNCRELVP CFSTAHMDAT LLGIGQYEPA TLAVEQPLAF FQAPRLVQAA
301: DNLSLPMFLP GGLQSGVSLL GIGGGAFQHW PSSGYEIKLE GSRAPPQMAV GPGQLDGAYG WGF
101: YWKATGKDRE IRSARNGALV GMKKTLVFYR GRAPKGQKTQ WVMHEFRLEG VYAYHFLPNN TTRDEWVIAK IFVKPGAVPP SRKARYGLSS AGDTSCFSDS
201: TSVSIGGGGG ASASSAPRQH LPDTSSLLAA AQAAADGESS SYGATANNNN AAGNCRELVP CFSTAHMDAT LLGIGQYEPA TLAVEQPLAF FQAPRLVQAA
301: DNLSLPMFLP GGLQSGVSLL GIGGGAFQHW PSSGYEIKLE GSRAPPQMAV GPGQLDGAYG WGF
001: MDVDVFNGWG RPRFEDESLM PPGFRFHPTD EELITYYLLK KVLDSNFSCA AISQVDLNKS EPWELPEKAK MGEKEWYFFT LRDRKYPTGL RTNRATEAGY
101: WKATGKDREI KSSKTKSLLG MKKTLVFYKG RAPKGEKSCW VMHEYRLDGK FSYHYISSSA KDEWVLCKVC LKSGVVSRET NLISSSSSSA VTGEFSSAGS
201: AIAPIINTFA TEHVSCFSNN SAAHTDASFH TFLPAPPPSL PPRQPRHVGD GVAFGQFLDL GSSGQIDFDA AAAAFFPNLP SLPPTVLPPP PSFAMYGGGS
301: PAVSVWPFTL
101: WKATGKDREI KSSKTKSLLG MKKTLVFYKG RAPKGEKSCW VMHEYRLDGK FSYHYISSSA KDEWVLCKVC LKSGVVSRET NLISSSSSSA VTGEFSSAGS
201: AIAPIINTFA TEHVSCFSNN SAAHTDASFH TFLPAPPPSL PPRQPRHVGD GVAFGQFLDL GSSGQIDFDA AAAAFFPNLP SLPPTVLPPP PSFAMYGGGS
301: PAVSVWPFTL
Arabidopsis Description
NAC054CUC1 [Source:UniProtKB/TrEMBL;Acc:A0A178V703]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.