Factsheet for TraesCS6A01G378600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G362900.1	Wheat	nucleus	91.83	92.74
TraesCS6B01G416300.1	Wheat	nucleus	93.46	92.56
HORVU0Hr1G017490.7	Barley	nucleus	91.83	90.35
TraesCS6A01G378500.1	Wheat	nucleus	85.62	84.24
TraesCS6B01G416500.1	Wheat	nucleus	48.04	76.96
CDY51707	Canola	cytosol	34.64	67.09
CDX92881	Canola	cytosol	34.31	64.42
Os02t0810900-01	Rice	nucleus	68.95	63.75
EES07725	Sorghum	cytosol	63.07	63.7
Zm00001d018435_P001	Maize	cytosol, mitochondrion, nucleus	60.78	62.84
Zm00001d051956_P001	Maize	cytosol, mitochondrion, nucleus	60.78	62.42
GSMUA_Achr11P...	Banana	nucleus	48.69	56.87
GSMUA_Achr5P18670_001	Banana	nucleus	49.02	54.95
GSMUA_Achr8P18980_001	Banana	nucleus	48.69	54.58
GSMUA_Achr11P...	Banana	nucleus	47.39	52.16
GSMUA_AchrUn_...	Banana	nucleus	43.14	51.36
GSMUA_Achr1P20530_001	Banana	cytosol, nucleus, plastid	45.75	50.54
GSMUA_Achr6P36550_001	Banana	nucleus	45.75	50.36
GSMUA_AchrUn_...	Banana	nucleus	47.39	50.0
GSMUA_Achr1P10860_001	Banana	nucleus	46.73	49.14
Solyc09g025310.2.1	Tomato	nucleus	42.81	48.52
TraesCS2A01G382400.1	Wheat	nucleus	49.02	48.39
PGSC0003DMT400026644	Potato	cytosol, nucleus, peroxisome	43.14	47.65
KRH32193	Soybean	cytosol, nucleus, plastid	44.77	46.28
KRG95684	Soybean	cytosol, nucleus, peroxisome	44.12	45.92
KRH67403	Soybean	cytosol, nucleus, plastid	44.12	45.61
Solyc06g008360.2.1	Tomato	nucleus	41.18	44.68
PGSC0003DMT400065559	Potato	nucleus	40.85	44.33
PGSC0003DMT400051915	Potato	cytosol	39.54	42.61
VIT_07s0005g03610.t01	Wine grape	mitochondrion, nucleus	32.35	40.41
TraesCS3A01G077900.1	Wheat	nucleus	27.12	38.78
CDY35197	Canola	nucleus	41.5	38.02
CDY14236	Canola	cytosol	41.5	37.8
CDX97445	Canola	cytosol	41.18	37.5
Bra011037.1-P	Field mustard	nucleus	41.5	36.92
CDY38380	Canola	nucleus	41.5	36.92
Bra024194.1-P	Field mustard	nucleus	42.16	36.75
AT4G28530.1	Thale cress	nucleus	42.16	36.65
Bra010362.1-P	Field mustard	nucleus	41.5	36.6
TraesCS7A01G464100.1	Wheat	nucleus	35.95	35.83
TraesCS7A01G305200.1	Wheat	cytosol	33.66	35.64
TraesCS7A01G464800.1	Wheat	nucleus	34.97	34.74
TraesCS5A01G049100.2	Wheat	cytosol, nucleus, peroxisome	33.99	33.99
TraesCS2A01G101200.1	Wheat	nucleus	29.74	32.97
TraesCS2A01G462500.1	Wheat	plastid	35.95	32.84
TraesCS4A01G242700.1	Wheat	cytosol, mitochondrion, nucleus	29.74	30.43
TraesCS2A01G338300.1	Wheat	nucleus	33.99	29.3
TraesCS7A01G334800.1	Wheat	nucleus	32.35	27.27
TraesCS4A01G130600.1	Wheat	nucleus	30.39	27.19
TraesCS7A01G247600.1	Wheat	extracellular	29.74	27.0
TraesCS2A01G101100.1	Wheat	cytosol, nucleus, plastid	30.39	26.72
TraesCS5A01G275900.1	Wheat	nucleus	31.7	26.43
TraesCS7A01G152500.1	Wheat	nucleus	30.72	26.4
TraesCS2A01G101400.1	Wheat	cytosol	30.07	26.06
TraesCS5A01G245900.2	Wheat	nucleus	26.47	24.7
TraesCS7A01G189200.1	Wheat	nucleus	27.45	24.07
TraesCS2A01G101000.1	Wheat	cytosol, nucleus, plastid	29.74	23.82
TraesCS7A01G194700.1	Wheat	nucleus	27.12	23.78
TraesCS7A01G569300.1	Wheat	cytosol	28.1	23.76
TraesCS7A01G569100.1	Wheat	nucleus	29.41	23.68
TraesCS5A01G143100.1	Wheat	nucleus	28.43	21.59
CDX92880	Canola	nucleus	9.48	14.65
CDY51708	Canola	nucleus	9.48	14.57

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR31744	PANTHER:PTHR31744:SF26	SUPFAM:SSF101941	EnsemblPlantsGene:TraesCS6A01G378600	EnsemblPlants:TraesCS6A01G378600.1	SEG:seg

Description

No Description!

Coordinates

chr6A:+:599715112..599717238

Molecular Weight (calculated)

33833.7 Da

IEP (calculated)

6.954

GRAVY (calculated)

-0.539

Length

306 amino acids

Sequence
(BLAST)

001: MGLRDIEMTL PPGFRFYPSD EELVCHYLHG KVANQRFAGG AAGTMVEVDL HVHEPWELPD VAKLSTNEWY FFSFRDRKYA TGLRTNRATR SGYWKATGKD
101: RVIRSPRSSS SRSGRAAIVG MRKTLVFYRG RAPNGSKTCW VMHEFRIENP HAPPKEDWVL CRVFHKKKAD TEYAMDGEQE IVGGMARSAA AVSGSNYVSS
201: SACHDPQYHH SPTAPFSSLG AGGHPYQLTS CDHHHTHGAA GVSLADMDPF ADMPPLTSYD SILDFSQQLQ GGGAGLRDGA GDQCGGELMD LGLQVQEEHY
301: NYNSLM

Best Arabidopsis Sequence Match ( AT2G24430.1 )
(BLAST)

001: MEQGDHQQHK KEEEALPPGF RFHPTDEELI SYYLVNKIAD QNFTGKAIAD VDLNKSEPWE LPEKAKMGGK EWYFFSLRDR KYPTGVRTNR ATNTGYWKTT
101: GKDKEIFNST TSELVGMKKT LVFYRGRAPR GEKTCWVMHE YRLHSKSSYR TSKQDEWVVC RVFKKTEATK KYISTSSSST SHHHNNHTRA SILSTNNNNP
201: NYSSDLLQLP PHLQPHPSLN INQSLMANAV HLAELSRVFR ASTSTTMDSS HQQLMNYTHM PVSGLNLNLG GALVQPPPVV SLEDVAAVSA SYNGENGFGN
301: VEMSQCMDLD GYWPSY

Arabidopsis Description

ANAC038NAC domain containing protein 38 [Source:UniProtKB/TrEMBL;Acc:Q9ZQ25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.