Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- peroxisome 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G054200.2 | Wheat | cytosol, nucleus, peroxisome | 98.69 | 98.37 |
| TraesCS5D01G059700.2 | Wheat | cytosol, nucleus, peroxisome | 97.39 | 98.35 |
| Os12t0610600-01 | Rice | nucleus | 83.33 | 76.58 |
| OQU79579 | Sorghum | cytosol, nucleus, peroxisome | 76.8 | 70.36 |
| Zm00001d041472_P001 | Maize | cytosol, nucleus, peroxisome | 72.55 | 65.49 |
| KXG28193 | Sorghum | cytosol | 54.58 | 59.64 |
| GSMUA_Achr6P30050_001 | Banana | nucleus | 50.65 | 54.39 |
| GSMUA_Achr9P10210_001 | Banana | nucleus | 42.48 | 53.94 |
| GSMUA_Achr6P31350_001 | Banana | nucleus | 52.29 | 53.69 |
| GSMUA_Achr9P26140_001 | Banana | cytosol | 53.59 | 52.06 |
| CDY51910 | Canola | nucleus | 41.18 | 50.4 |
| TraesCS7A01G464100.1 | Wheat | nucleus | 48.69 | 48.53 |
| KRH43817 | Soybean | nucleus | 47.71 | 48.34 |
| KRH13649 | Soybean | nucleus | 47.71 | 48.18 |
| TraesCS7A01G464800.1 | Wheat | nucleus | 48.04 | 47.73 |
| TraesCS7A01G305200.1 | Wheat | cytosol | 44.77 | 47.4 |
| VIT_19s0027g00230.t01 | Wine grape | nucleus | 45.42 | 47.12 |
| CDX82566 | Canola | nucleus | 42.16 | 46.57 |
| Bra034713.1-P | Field mustard | nucleus | 41.83 | 46.55 |
| Bra001480.1-P | Field mustard | nucleus | 41.83 | 46.21 |
| CDY23558 | Canola | nucleus | 41.18 | 45.99 |
| AT3G12977.1 | Thale cress | nucleus | 41.83 | 45.88 |
| CDY60115 | Canola | nucleus | 41.83 | 45.88 |
| Solyc07g066330.2.1 | Tomato | nucleus | 50.0 | 44.74 |
| PGSC0003DMT400056916 | Potato | nucleus | 50.33 | 44.13 |
| Bra030820.1-P | Field mustard | nucleus | 45.1 | 42.99 |
| CDY42401 | Canola | nucleus | 45.1 | 42.99 |
| CDY10515 | Canola | nucleus | 44.44 | 42.24 |
| AT1G56010.2 | Thale cress | nucleus | 44.44 | 41.98 |
| TraesCS3A01G077900.1 | Wheat | nucleus | 27.78 | 39.72 |
| TraesCS2A01G462500.1 | Wheat | plastid | 41.83 | 38.21 |
| TraesCS2A01G101200.1 | Wheat | nucleus | 31.37 | 34.78 |
| TraesCS6A01G378600.1 | Wheat | nucleus | 33.99 | 33.99 |
| TraesCS2A01G382400.1 | Wheat | nucleus | 34.31 | 33.87 |
| TraesCS6A01G378500.1 | Wheat | nucleus | 33.66 | 33.12 |
| TraesCS4A01G242700.1 | Wheat | cytosol, mitochondrion, nucleus | 31.7 | 32.44 |
| TraesCS2A01G338300.1 | Wheat | nucleus | 37.25 | 32.11 |
| TraesCS4A01G130600.1 | Wheat | nucleus | 33.66 | 30.12 |
| TraesCS2A01G101400.1 | Wheat | cytosol | 34.64 | 30.03 |
| TraesCS7A01G334800.1 | Wheat | nucleus | 35.62 | 30.03 |
| TraesCS2A01G101100.1 | Wheat | cytosol, nucleus, plastid | 33.66 | 29.6 |
| TraesCS7A01G247600.1 | Wheat | extracellular | 31.05 | 28.19 |
| TraesCS7A01G152500.1 | Wheat | nucleus | 32.68 | 28.09 |
| TraesCS5A01G245900.2 | Wheat | nucleus | 30.07 | 28.05 |
| TraesCS7A01G569300.1 | Wheat | cytosol | 32.35 | 27.35 |
| TraesCS2A01G101000.1 | Wheat | cytosol, nucleus, plastid | 33.99 | 27.23 |
| TraesCS7A01G194700.1 | Wheat | nucleus | 31.05 | 27.22 |
| TraesCS5A01G275900.1 | Wheat | nucleus | 32.35 | 26.98 |
| TraesCS7A01G189200.1 | Wheat | nucleus | 30.39 | 26.65 |
| TraesCS7A01G569100.1 | Wheat | nucleus | 32.68 | 26.32 |
| TraesCS5A01G143100.1 | Wheat | nucleus | 30.72 | 23.33 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31744 | PANTHER:PTHR31744:SF19 | SUPFAM:SSF101941 | EnsemblPlantsGene:TraesCS5A01G049100 | EnsemblPlants:TraesCS5A01G049100.2 | SEG:seg |
Description
No Description!
Coordinates
chr5A:-:44983964..44988301
Molecular Weight (calculated)
33528.1 Da
IEP (calculated)
9.453
GRAVY (calculated)
-0.366
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMSFLSMVE TELPPGFRFH PRDDELICDY LAPKVTGKVG FSGRRPPMVD VDLNKVEPWD LPVTASVGGK EWYFYSLKDR KYATGQRTNR ATVSGYWKAT
101: GKDRVVARRG ALVGMRKTLV FYQGRAPKGR KTEWVMHEYR LEGAHEQASK QEDWVLCRVI CKKKSGVGAT PRPRNLSNIV HGTPTDTSSP PLPPLMDTTL
201: AQLQATMNTS AAAAAAALEQ VPCFSSFSNN SASNSSYLPM VTGNSNGMGY MDHGLPDFGS YLDPAMNCDK KVLKAVLSQL SSMGGEVVPS MSPQMAAAVS
301: STWNHF
101: GKDRVVARRG ALVGMRKTLV FYQGRAPKGR KTEWVMHEYR LEGAHEQASK QEDWVLCRVI CKKKSGVGAT PRPRNLSNIV HGTPTDTSSP PLPPLMDTTL
201: AQLQATMNTS AAAAAAALEQ VPCFSSFSNN SASNSSYLPM VTGNSNGMGY MDHGLPDFGS YLDPAMNCDK KVLKAVLSQL SSMGGEVVPS MSPQMAAAVS
301: STWNHF
001: METEEEMKES SISMVEAKLP PGFRFHPKDD ELVCDYLMRR SLHNNHRPPL VLIQVDLNKC EPWDIPKMAC VGGKDWYFYS QRDRKYATGL RTNRATATGY
101: WKATGKDRTI LRKGKLVGMR KTLVFYQGRA PRGRKTDWVM HEFRLQGSHH PPNHSLSSPK EDWVLCRVFH KNTEGVICRD NMGSCFDETA SASLPPLMDP
201: YINFDQEPSS YLSDDHHYII NEHVPCFSNL SQNQTLNSNL TNSVSELKIP CKNPNPLFTG GSASATLTGL DSFCSSDQMV LRALLSQLTK IDGSLGPKES
301: QSYGEGSSES LLTDIGIPST VWNC
101: WKATGKDRTI LRKGKLVGMR KTLVFYQGRA PRGRKTDWVM HEFRLQGSHH PPNHSLSSPK EDWVLCRVFH KNTEGVICRD NMGSCFDETA SASLPPLMDP
201: YINFDQEPSS YLSDDHHYII NEHVPCFSNL SQNQTLNSNL TNSVSELKIP CKNPNPLFTG GSASATLTGL DSFCSSDQMV LRALLSQLTK IDGSLGPKES
301: QSYGEGSSES LLTDIGIPST VWNC
Arabidopsis Description
NAC021NAC domain-containing protein 21/22 [Source:UniProtKB/Swiss-Prot;Acc:Q84TE6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.