Factsheet for TraesCS7A01G152500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G195400.4
TraesCS1B01G210300.4
TraesCS1D01G199200.1
TraesCS4A01G321300.1
TraesCS5B01G557500.2
TraesCS5D01G551800.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G04060.1	TraesCS1A01G195400.4	AT1G32230.1	19548978
AT3G04060.1	TraesCS1B01G210300.4	AT1G32230.1	19548978
AT3G04060.1	TraesCS1D01G199200.1	AT1G32230.1	19548978
AT3G04060.1	TraesCS4A01G321300.1	AT1G32230.1	19548978
AT3G04060.1	TraesCS5B01G557500.2	AT1G32230.1	19548978
AT3G04060.1	TraesCS5D01G551800.3	AT1G32230.1	19548978

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G154200.1	Wheat	nucleus	97.19	97.19
TraesCS7B01G056300.1	Wheat	nucleus	93.26	93.0
HORVU7Hr1G031260.1	Barley	nucleus	84.55	85.03
TraesCS7A01G194700.1	Wheat	nucleus	66.57	67.91
TraesCS7A01G189200.1	Wheat	nucleus	64.33	65.62
TraesCS7A01G569300.1	Wheat	cytosol	63.2	62.15
TraesCS3A01G077900.1	Wheat	nucleus	35.96	59.81
CDY29982	Canola	cytosol	27.81	57.56
EES02626	Sorghum	cytosol	23.03	57.34
TraesCS7A01G569100.1	Wheat	nucleus	58.99	55.26
GSMUA_Achr10P...	Banana	cytosol	32.3	50.44
GSMUA_Achr5P07600_001	Banana	cytosol	34.27	49.59
Os01t0104500-01	Rice	cytosol, mitochondrion, nucleus	40.17	44.69
GSMUA_Achr7P18330_001	Banana	nucleus	37.36	43.18
GSMUA_Achr9P16920_001	Banana	cytosol	37.08	43.14
TraesCS5A01G245900.2	Wheat	nucleus	39.61	42.99
Os01t0393100-01	Rice	nucleus	39.33	42.68
GSMUA_Achr3P09520_001	Banana	cytosol	36.52	40.88
TraesCS2A01G101200.1	Wheat	nucleus	31.18	40.22
TraesCS4A01G130600.1	Wheat	nucleus	38.48	40.06
GSMUA_Achr6P08600_001	Banana	nucleus	38.76	39.77
GSMUA_Achr6P32290_001	Banana	nucleus	38.2	39.31
GSMUA_Achr3P18020_001	Banana	nucleus	32.3	39.25
TraesCS4A01G242700.1	Wheat	cytosol, mitochondrion, nucleus	32.58	38.8
CDX70804	Canola	nucleus	34.55	36.5
Bra006449.1-P	Field mustard	nucleus	34.27	36.31
CDY51238	Canola	nucleus	34.27	36.2
CDY02636	Canola	nucleus	34.27	36.2
AT5G18270.1	Thale cress	nucleus	33.99	36.12
Bra023669.1-P	Field mustard	nucleus	33.99	36.01
CDY53250	Canola	nucleus	33.99	36.01
Bra002148.1-P	Field mustard	nucleus	33.71	35.71
TraesCS7A01G247600.1	Wheat	extracellular	33.43	35.31
Zm00001d040189_P002	Maize	mitochondrion, nucleus, peroxisome	38.76	35.29
EES02651	Sorghum	nucleus	39.61	35.25
AT3G04060.1	Thale cress	nucleus	33.43	35.21
TraesCS5A01G275900.1	Wheat	nucleus	35.96	34.88
Zm00001d008403_P001	Maize	plastid	31.46	34.78
KRG94783	Soybean	nucleus	39.33	34.57
TraesCS7A01G305200.1	Wheat	cytosol	27.81	34.26
VIT_08s0007g07640.t01	Wine grape	nucleus	38.76	34.24
KXG28945	Sorghum	cytoskeleton, nucleus, peroxisome	35.67	34.23
OQU89451	Sorghum	cytosol	35.67	34.14
CDY50879	Canola	cytoskeleton, cytosol, nucleus	32.87	34.11
Bra031950.1-P	Field mustard	cytoskeleton, cytosol, nucleus	32.87	34.01
CDY42901	Canola	nucleus	32.58	33.72
TraesCS2A01G101100.1	Wheat	cytosol, nucleus, plastid	32.87	33.62
KRH06738	Soybean	nucleus	38.2	33.42
Bra040153.1-P	Field mustard	nucleus	32.02	33.24
TraesCS7A01G464100.1	Wheat	nucleus	28.65	33.22
EES17917	Sorghum	cytosol	37.36	33.08
TraesCS2A01G338300.1	Wheat	nucleus	32.87	32.96
TraesCS5A01G049100.2	Wheat	cytosol, nucleus, peroxisome	28.09	32.68
TraesCS2A01G101400.1	Wheat	cytosol	32.3	32.58
TraesCS7A01G464800.1	Wheat	nucleus	28.09	32.47
KRH08479	Soybean	nucleus	36.52	31.71
TraesCS7A01G334800.1	Wheat	nucleus	32.3	31.68
KRH70130	Soybean	nucleus	35.96	31.22
TraesCS5A01G143100.1	Wheat	nucleus	34.83	30.77
TraesCS6A01G378600.1	Wheat	nucleus	26.4	30.72
TraesCS2A01G101000.1	Wheat	cytosol, nucleus, plastid	32.58	30.37
TraesCS2A01G382400.1	Wheat	nucleus	25.84	29.68
TraesCS2A01G462500.1	Wheat	plastid	27.81	29.55
TraesCS6A01G378500.1	Wheat	nucleus	25.28	28.94
GSMUA_Achr8P21470_001	Banana	nucleus	39.61	27.33

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR31744	PANTHER:PTHR31744:SF23	SUPFAM:SSF101941	EnsemblPlantsGene:TraesCS7A01G152500	EnsemblPlants:TraesCS7A01G152500.1	SEG:seg

Description

No Description!

Coordinates

chr7A:-:105777084..105778264

Molecular Weight (calculated)

39867.7 Da

IEP (calculated)

7.844

GRAVY (calculated)

-0.504

Length

356 amino acids

Sequence
(BLAST)

001: MADHLQVQRQ QLKFPQGFRF HPTDVEIITS YLVPKVLNKA FDPIAVGEVD LNKCEPWELP EKAKMGEKEW YFFSQKDRKY PTGIRTNRAT TAGYWKATGK
101: DKEIFHHATT SLIGMKKTLV FYKGRAPRGE KTNWVMHEYR LESGKQGTPS LPIDITTATA INASSKEEYV VCRIFHKSTG LKKVVMSSYA IPMPMSMGGE
201: EQHGFLESGT LPPFMGYGAS SSLVPPSSLP ASSSYQLHDT GARSSMMGTA VLLMMNDRYF GNHHYQNMAT PPRPLVSFYH HDHQQQQQQQ QHMIQMPMQM
301: QIGADEGLMI GVEPGSGPSS IVSQEDTLAR LSSNDVATTA EEISSVNMGT DGMWKY

Best Arabidopsis Sequence Match ( AT2G24430.1 )
(BLAST)

001: MEQGDHQQHK KEEEALPPGF RFHPTDEELI SYYLVNKIAD QNFTGKAIAD VDLNKSEPWE LPEKAKMGGK EWYFFSLRDR KYPTGVRTNR ATNTGYWKTT
101: GKDKEIFNST TSELVGMKKT LVFYRGRAPR GEKTCWVMHE YRLHSKSSYR TSKQDEWVVC RVFKKTEATK KYISTSSSST SHHHNNHTRA SILSTNNNNP
201: NYSSDLLQLP PHLQPHPSLN INQSLMANAV HLAELSRVFR ASTSTTMDSS HQQLMNYTHM PVSGLNLNLG GALVQPPPVV SLEDVAAVSA SYNGENGFGN
301: VEMSQCMDLD GYWPSY

Arabidopsis Description

ANAC038NAC domain containing protein 38 [Source:UniProtKB/TrEMBL;Acc:Q9ZQ25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.