Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G04060.1 | EER90487 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | KXG38822 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES02626 | Sorghum | cytosol | 25.81 | 67.13 |
| KXG28945 | Sorghum | cytoskeleton, nucleus, peroxisome | 62.63 | 62.8 |
| EES02651 | Sorghum | nucleus | 66.4 | 61.75 |
| EES17917 | Sorghum | cytosol | 64.78 | 59.95 |
| Zm00001d008403_P001 | Maize | plastid | 48.92 | 56.52 |
| CDY29982 | Canola | cytosol | 26.08 | 56.4 |
| HORVU3Hr1G014090.1 | Barley | nucleus | 28.76 | 49.31 |
| TraesCS3A01G077900.1 | Wheat | nucleus | 27.42 | 47.66 |
| TraesCS3B01G092800.1 | Wheat | cytosol | 26.88 | 46.95 |
| GSMUA_Achr10P... | Banana | cytosol | 27.96 | 45.61 |
| GSMUA_Achr5P07600_001 | Banana | cytosol | 29.57 | 44.72 |
| TraesCS3D01G078500.1 | Wheat | nucleus | 26.88 | 44.44 |
| Os01t0104500-01 | Rice | cytosol, mitochondrion, nucleus | 34.95 | 40.62 |
| TraesCS7B01G094000.1 | Wheat | nucleus | 28.76 | 39.19 |
| Os01t0393100-01 | Rice | nucleus | 34.41 | 39.02 |
| GSMUA_Achr3P18020_001 | Banana | nucleus | 29.84 | 37.88 |
| GSMUA_Achr7P18330_001 | Banana | nucleus | 30.65 | 37.01 |
| GSMUA_Achr9P16920_001 | Banana | cytosol | 30.11 | 36.6 |
| GSMUA_Achr3P09520_001 | Banana | cytosol | 31.18 | 36.48 |
| TraesCS7D01G543400.1 | Wheat | nucleus | 33.06 | 36.18 |
| TraesCS7B01G056300.1 | Wheat | nucleus | 34.68 | 36.13 |
| TraesCS7D01G154200.1 | Wheat | nucleus | 34.41 | 35.96 |
| TraesCS7A01G152500.1 | Wheat | nucleus | 34.14 | 35.67 |
| GSMUA_Achr6P08600_001 | Banana | nucleus | 33.06 | 35.45 |
| HORVU7Hr1G031260.1 | Barley | nucleus | 33.6 | 35.31 |
| TraesCS7B01G100300.1 | Wheat | nucleus | 30.11 | 34.67 |
| AT5G18270.1 | Thale cress | nucleus | 31.18 | 34.63 |
| TraesCS7B01G489500.2 | Wheat | cytosol | 32.26 | 34.58 |
| EER92328 | Sorghum | cytosol | 33.06 | 34.55 |
| TraesCS5A01G245900.2 | Wheat | nucleus | 30.38 | 34.45 |
| CDY02636 | Canola | nucleus | 31.18 | 34.42 |
| CDY53250 | Canola | nucleus | 30.91 | 34.23 |
| Bra023669.1-P | Field mustard | nucleus | 30.91 | 34.23 |
| TraesCS7D01G189900.1 | Wheat | nucleus | 29.57 | 34.06 |
| EER93792 | Sorghum | cytosol, mitochondrion, nucleus | 31.18 | 34.02 |
| TraesCS7A01G569300.1 | Wheat | cytosol | 32.8 | 33.7 |
| EER97754 | Sorghum | nucleus | 30.11 | 33.63 |
| Bra002148.1-P | Field mustard | nucleus | 30.38 | 33.63 |
| CDX70804 | Canola | nucleus | 30.38 | 33.53 |
| GSMUA_Achr6P32290_001 | Banana | nucleus | 31.18 | 33.53 |
| HORVU7Hr1G039700.1 | Barley | nucleus | 31.18 | 33.53 |
| Bra006449.1-P | Field mustard | nucleus | 30.11 | 33.33 |
| TraesCS7A01G194700.1 | Wheat | nucleus | 31.18 | 33.24 |
| TraesCS7D01G196300.1 | Wheat | cytosol, nucleus, peroxisome | 31.18 | 33.24 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 30.65 | 33.24 |
| CDY51238 | Canola | nucleus | 30.11 | 33.23 |
| EES13494 | Sorghum | cytosol, nucleus, plastid | 25.81 | 33.22 |
| Bra031950.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 30.65 | 33.14 |
| AT3G04060.1 | Thale cress | nucleus | 30.11 | 33.14 |
| TraesCS3B01G092900.3 | Wheat | nucleus | 31.72 | 33.05 |
| CDY42901 | Canola | nucleus | 30.38 | 32.85 |
| TraesCS5B01G243300.1 | Wheat | nucleus | 23.66 | 32.84 |
| EES05451 | Sorghum | nucleus | 26.61 | 32.78 |
| TraesCS7A01G189200.1 | Wheat | nucleus | 30.65 | 32.66 |
| Bra040153.1-P | Field mustard | nucleus | 30.11 | 32.65 |
| KRG94783 | Soybean | nucleus | 35.48 | 32.59 |
| HORVU4Hr1G089450.1 | Barley | cytosol, mitochondrion, nucleus, peroxisome | 30.65 | 32.57 |
| EER99125 | Sorghum | nucleus | 32.8 | 32.45 |
| HORVU7Hr1G122680.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 32.26 | 32.43 |
| KXG26719 | Sorghum | nucleus | 25.27 | 32.41 |
| TraesCS7A01G569100.1 | Wheat | nucleus | 32.8 | 32.11 |
| HORVU3Hr1G014100.1 | Barley | cytosol, nucleus | 32.53 | 32.1 |
| VIT_08s0007g07640.t01 | Wine grape | nucleus | 34.68 | 32.01 |
| TraesCS7D01G543500.2 | Wheat | endoplasmic reticulum | 32.53 | 31.84 |
| KRH06738 | Soybean | nucleus | 34.41 | 31.45 |
| EER88807 | Sorghum | nucleus | 25.81 | 31.27 |
| EES10946 | Sorghum | cytosol, mitochondrion, nucleus | 29.57 | 30.9 |
| EES14261 | Sorghum | nucleus | 28.23 | 30.79 |
| EES07725 | Sorghum | cytosol | 25.0 | 30.69 |
| OQU79579 | Sorghum | cytosol, nucleus, peroxisome | 26.61 | 29.64 |
| OQU82346 | Sorghum | cytosol, nucleus, plastid | 24.19 | 29.13 |
| KRH70130 | Soybean | nucleus | 31.99 | 29.02 |
| KRH08479 | Soybean | nucleus | 31.45 | 28.54 |
| EES05316 | Sorghum | nucleus | 27.42 | 28.18 |
| EES07908 | Sorghum | nucleus, peroxisome, plastid | 29.3 | 27.46 |
| KXG28193 | Sorghum | cytosol | 18.82 | 25.0 |
| KXG23228 | Sorghum | plastid | 29.57 | 24.77 |
| GSMUA_Achr8P21470_001 | Banana | nucleus | 32.26 | 23.26 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EntrezGene:8055787 | UniProt:A0A1W0W530 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | EnsemblPlants:OQU89451 |
| ProteinID:OQU89451 | ProteinID:OQU89451.1 | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF23 |
| EnsemblPlantsGene:SORBI_3002G192600 | SUPFAM:SSF101941 | UniParc:UPI0001A83AC9 | RefSeq:XP_002460177.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr2:+:57932635..57934018
Molecular Weight (calculated)
40819.9 Da
IEP (calculated)
6.262
GRAVY (calculated)
-0.415
Length
372 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEQQQQEMN TASIGGGLTL PPGFRFHPSD NEIVSIYLMN KVHNRGFTST IIAEVDLNKT EPWDLPQEAK IGEKEWYFFY QKDRKYPSGL RANRATKGGY
101: WKATGRDKEV DNTTQGVVLL IGMKKTLVFY RGKAPKGDKT NWVMHEYRLE GSSRLPDPAS ASSSASNVLA MKASASKDEW VVCRVFDKTT SIKKMTTPVY
201: KVAMASAEIG QNQNNTPAIP IPMPLQQPLP VPMPMESPIL RDFATCPVAP YFPNTGADMP PMMSSMEGID GTSSLQINDT LFGNSIATPP QMDLYHHMGM
301: GVAAVHMGIG VAGQMDMAAT GTDGFDLATP MPPSMASQKD EQANVAKMWS MMSVAGPGSV NPSTERDDIW KY
101: WKATGRDKEV DNTTQGVVLL IGMKKTLVFY RGKAPKGDKT NWVMHEYRLE GSSRLPDPAS ASSSASNVLA MKASASKDEW VVCRVFDKTT SIKKMTTPVY
201: KVAMASAEIG QNQNNTPAIP IPMPLQQPLP VPMPMESPIL RDFATCPVAP YFPNTGADMP PMMSSMEGID GTSSLQINDT LFGNSIATPP QMDLYHHMGM
301: GVAAVHMGIG VAGQMDMAAT GTDGFDLATP MPPSMASQKD EQANVAKMWS MMSVAGPGSV NPSTERDDIW KY
001: MEQGDHQQHK KEEEALPPGF RFHPTDEELI SYYLVNKIAD QNFTGKAIAD VDLNKSEPWE LPEKAKMGGK EWYFFSLRDR KYPTGVRTNR ATNTGYWKTT
101: GKDKEIFNST TSELVGMKKT LVFYRGRAPR GEKTCWVMHE YRLHSKSSYR TSKQDEWVVC RVFKKTEATK KYISTSSSST SHHHNNHTRA SILSTNNNNP
201: NYSSDLLQLP PHLQPHPSLN INQSLMANAV HLAELSRVFR ASTSTTMDSS HQQLMNYTHM PVSGLNLNLG GALVQPPPVV SLEDVAAVSA SYNGENGFGN
301: VEMSQCMDLD GYWPSY
101: GKDKEIFNST TSELVGMKKT LVFYRGRAPR GEKTCWVMHE YRLHSKSSYR TSKQDEWVVC RVFKKTEATK KYISTSSSST SHHHNNHTRA SILSTNNNNP
201: NYSSDLLQLP PHLQPHPSLN INQSLMANAV HLAELSRVFR ASTSTTMDSS HQQLMNYTHM PVSGLNLNLG GALVQPPPVV SLEDVAAVSA SYNGENGFGN
301: VEMSQCMDLD GYWPSY
Arabidopsis Description
ANAC038NAC domain containing protein 38 [Source:UniProtKB/TrEMBL;Acc:Q9ZQ25]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.