CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 3
plastid 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013717_P001	Maize	nucleus	85.92	88.79
TraesCS4D01G071200.1	Wheat	cytosol, mitochondrion, nucleus	69.21	78.93
HORVU4Hr1G012030.1	Barley	cytosol, mitochondrion, nucleus	68.92	78.6
TraesCS4A01G242700.1	Wheat	cytosol, mitochondrion, nucleus	68.92	78.6
TraesCS4B01G072400.1	Wheat	cytosol, mitochondrion, nucleus	68.33	77.93
Os03t0624600-01	Rice	cytosol, mitochondrion, nucleus	66.57	70.28
CDY68680	Canola	nucleus	38.71	62.86
CDY70041	Canola	nucleus	38.71	61.68
GSMUA_Achr9P00570_001	Banana	nucleus	26.98	54.76
VIT_17s0000g03660.t01	Wine grape	nucleus	49.56	51.68
GSMUA_Achr8P18420_001	Banana	nucleus	43.4	51.39
EES02626	Sorghum	cytosol	21.11	50.35
CDX75966	Canola	nucleus	41.35	50.18
KRH48487	Soybean	nucleus	47.51	50.0
CDY69369	Canola	nucleus	43.7	49.01
CDY18519	Canola	nucleus	43.4	49.01
Bra037585.1-P	Field mustard	nucleus	43.11	49.0
KRH60340	Soybean	nucleus	45.75	48.6
Bra001705.1-P	Field mustard	nucleus	42.52	48.49
CDY51941	Canola	nucleus	42.52	48.49
Bra022319.1-P	Field mustard	nucleus	43.4	48.21
CDY67593	Canola	nucleus	43.4	48.21
GSMUA_Achr10P...	Banana	nucleus	46.33	48.17
Solyc12g036480.1.1	Tomato	nucleus	46.04	48.16
KRH39185	Soybean	nucleus	46.63	48.04
KRH41635	Soybean	nucleus	43.99	47.92
PGSC0003DMT400013753	Potato	nucleus	46.63	47.46
AT3G18400.1	Thale cress	nucleus	43.4	47.13
PGSC0003DMT400074048	Potato	nucleus	39.88	44.59
EES13494	Sorghum	cytosol, nucleus, plastid	30.79	36.33
EER97754	Sorghum	nucleus	34.31	35.14
EER99125	Sorghum	nucleus	38.71	35.11
EER88807	Sorghum	nucleus	31.09	34.53
EES14261	Sorghum	nucleus	34.31	34.31
EES10946	Sorghum	cytosol, mitochondrion, nucleus	35.78	34.27
EER92328	Sorghum	cytosol	35.48	33.99
EES05316	Sorghum	nucleus	35.78	33.7
KXG26719	Sorghum	nucleus	28.15	33.1
EES05451	Sorghum	nucleus	29.03	32.78
EES07725	Sorghum	cytosol	29.03	32.67
OQU82346	Sorghum	cytosol, nucleus, plastid	29.33	32.36
OQU89451	Sorghum	cytosol	34.02	31.18
OQU79579	Sorghum	cytosol, nucleus, peroxisome	30.5	31.14
KXG28945	Sorghum	cytoskeleton, nucleus, peroxisome	32.84	30.19
KXG23228	Sorghum	plastid	39.3	30.18
EES07908	Sorghum	nucleus, peroxisome, plastid	34.02	29.22
EES02651	Sorghum	nucleus	33.72	28.75
EES17917	Sorghum	cytosol	32.84	27.86
Solyc06g069100.1.1	Tomato	nucleus	39.59	27.16
KXG28193	Sorghum	cytosol	21.99	26.79

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EntrezGene:8062253	UniProt:C5WS74	EnsemblPlants:EER93792	ProteinID:EER93792
ProteinID:EER93792.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093
InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31744	PANTHER:PTHR31744:SF43
EnsemblPlantsGene:SORBI_3001G163800	SUPFAM:SSF101941	UniParc:UPI0001A82BEC	RefSeq:XP_002466794.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:-:13533890..13535758

Molecular Weight (calculated)

37259.4 Da

IEP (calculated)

8.283

GRAVY (calculated)

-0.396

Length

341 amino acids

Sequence
(BLAST)

001: MEEGLPPGFR FHPTDEELVT YYLTRKVSDF AFATRAIADV DLNKCEPWDL PSKASMGEKE WYFFSMRDRK YPTGIRTNRA TDSGYWKTTG KDKEIFHCGM
101: LVGMKKTLVF YRGRAPKGQK TSWVMHEYRL QNKFPYKPNK EEWVVCRVFK KCQVIKMRPP QDSPTMGSPC HDAGNASLGE LGELDVSSIL GGLAAAAAHT
201: SSGSPPGVLH HQGSAAAAES FVGAHNRPVD MSAYMSWMAA ANQGAAAAAA MLPWATTTPP GLFGNVFAPN NHQLLQKPLP FAGGCSGQPR GLGGVVANNV
301: VVGSGEHAMF GSSVVKVGME CDQQQQPEQQ LGMDESTWRT F

Best Arabidopsis Sequence Match ( AT3G18400.1 )
(BLAST)

001: MEENLPPGFR FHPTDEELIT HYLCRKVSDI GFTGKAVVDV DLNKCEPWDL PAKASMGEKE WYFFSQRDRK YPTGLRTNRA TEAGYWKTTG KDKEIYRSGV
101: LVGMKKTLVF YKGRAPKGEK SNWVMHEYRL ESKQPFNPTN KEEWVVCRVF EKSTAAKKAQ EQQPQSSQPS FGSPCDANSS MANEFEDIDE LPNLNSNSST
201: IDYNNHIHQY SQRNVYSEDN TTSTAGLNMN MNMASTNLQS WTTSLLGPPL SPINSLLLKA FQIRNSYSFP KEMIPSFNHS SLQQGVSNMI QNASSSSQVQ
301: PQPQEEAFNM DSIW

Arabidopsis Description

anac058NAC domain containing protein 58 [Source:UniProtKB/TrEMBL;Acc:Q9LS50]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.