Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400074048 | Potato | nucleus | 45.88 | 74.75 |
| CDY68680 | Canola | nucleus | 25.96 | 61.43 |
| CDY70041 | Canola | nucleus | 25.96 | 60.28 |
| GSMUA_Achr9P00570_001 | Banana | nucleus | 18.71 | 55.36 |
| CDX75966 | Canola | nucleus | 26.96 | 47.69 |
| Solyc12g036480.1.1 | Tomato | nucleus | 30.78 | 46.93 |
| TraesCS4D01G071200.1 | Wheat | cytosol, mitochondrion, nucleus | 27.97 | 46.49 |
| TraesCS4A01G242700.1 | Wheat | cytosol, mitochondrion, nucleus | 27.77 | 46.15 |
| TraesCS4B01G072400.1 | Wheat | cytosol, mitochondrion, nucleus | 27.77 | 46.15 |
| Bra037585.1-P | Field mustard | nucleus | 27.77 | 46.0 |
| HORVU4Hr1G012030.1 | Barley | cytosol, mitochondrion, nucleus | 27.57 | 45.82 |
| CDY18519 | Canola | nucleus | 27.77 | 45.7 |
| GSMUA_Achr8P18420_001 | Banana | nucleus | 26.36 | 45.49 |
| Bra022319.1-P | Field mustard | nucleus | 27.97 | 45.28 |
| Bra001705.1-P | Field mustard | nucleus | 27.16 | 45.15 |
| CDY51941 | Canola | nucleus | 27.16 | 45.15 |
| CDY69369 | Canola | nucleus | 27.57 | 45.07 |
| AT3G18400.1 | Thale cress | nucleus | 28.17 | 44.59 |
| VIT_17s0000g03660.t01 | Wine grape | nucleus | 29.18 | 44.34 |
| CDY67593 | Canola | nucleus | 27.36 | 44.3 |
| KRH41635 | Soybean | nucleus | 27.36 | 43.45 |
| Solyc08g006020.2.1 | Tomato | nucleus | 26.36 | 43.38 |
| KRH48487 | Soybean | nucleus | 28.17 | 43.21 |
| KRH60340 | Soybean | nucleus | 27.77 | 42.99 |
| GSMUA_Achr10P... | Banana | nucleus | 27.97 | 42.38 |
| Zm00001d033308_P001 | Maize | nucleus | 27.36 | 41.72 |
| KRH39185 | Soybean | nucleus | 27.77 | 41.69 |
| Solyc03g115850.2.1 | Tomato | nucleus | 26.56 | 40.49 |
| Solyc08g074300.2.1 | Tomato | nucleus | 27.57 | 40.18 |
| Solyc02g088180.2.1 | Tomato | cytosol | 25.75 | 40.13 |
| Os03t0624600-01 | Rice | cytosol, mitochondrion, nucleus | 25.96 | 39.94 |
| Zm00001d013717_P001 | Maize | nucleus | 26.36 | 39.7 |
| EER93792 | Sorghum | cytosol, mitochondrion, nucleus | 27.16 | 39.59 |
| Solyc06g069710.2.1 | Tomato | nucleus | 26.96 | 39.53 |
| Solyc07g062840.2.1 | Tomato | nucleus | 26.36 | 37.22 |
| Solyc09g025310.2.1 | Tomato | nucleus | 17.71 | 32.59 |
| Solyc06g008360.2.1 | Tomato | nucleus | 18.31 | 32.27 |
| Solyc07g066330.2.1 | Tomato | nucleus | 22.13 | 32.16 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 |
| InterPro:IPR036093 | UniProt:K4C883 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFAM:PF05678 |
| PFscan:PS51005 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF46 | SUPFAM:SSF101941 | EnsemblPlantsGene:Solyc06g069100.1 | EnsemblPlants:Solyc06g069100.1.1 |
| UniParc:UPI0002766783 | InterPro:VQ | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr6:-:42886815..42891453
Molecular Weight (calculated)
56359.5 Da
IEP (calculated)
6.592
GRAVY (calculated)
-0.799
Length
497 amino acids
Sequence
(BLAST)
(BLAST)
001: MMIEQYNIMD EKNLPPGFRF HPSDEELITY YLSNKVSDFS FTTRAIADVD LNKSEPWDLP AKSSMGEKEW YFFSQKDRKY PTGLRSNRAT EAGYWKTTGK
101: DKEIFRGGVE LVGMKKTLVF YKGRAPKGEK TNWVMHEYRL QSNLGFKPPK EEWVVCRLFH KNSTVKKSNA TSSQPSDQVE SISDAYTLPN FNIPAPHEGQ
201: IVNDISLHNY YTSQENMNIV NLDPLPSLLL YKAIQCRGNY NHQPMNIDPS INTMNHAQFY HHTNSNQAIV NNNNNNNLSS PLKINKASHH IKKSLSNSLP
301: SSSSSSSLYN TVAATTSTTI IPHQQQQQQR QPVIIYTHSP KVIHTHPRDF KALVQKLTGL SPEEVSSSPQ SMPMPQYHPK SEPINGEMDH DHDTIIGAES
401: CFGDEQNNYH RNNMTNINTN INEKCDLLMN DDNDSVVTDE NNEFNGSSCI GDNNSSASCY VPHQQLSNYT DSLFSMPSMR NSFSSSSSES IKELPDF
101: DKEIFRGGVE LVGMKKTLVF YKGRAPKGEK TNWVMHEYRL QSNLGFKPPK EEWVVCRLFH KNSTVKKSNA TSSQPSDQVE SISDAYTLPN FNIPAPHEGQ
201: IVNDISLHNY YTSQENMNIV NLDPLPSLLL YKAIQCRGNY NHQPMNIDPS INTMNHAQFY HHTNSNQAIV NNNNNNNLSS PLKINKASHH IKKSLSNSLP
301: SSSSSSSLYN TVAATTSTTI IPHQQQQQQR QPVIIYTHSP KVIHTHPRDF KALVQKLTGL SPEEVSSSPQ SMPMPQYHPK SEPINGEMDH DHDTIIGAES
401: CFGDEQNNYH RNNMTNINTN INEKCDLLMN DDNDSVVTDE NNEFNGSSCI GDNNSSASCY VPHQQLSNYT DSLFSMPSMR NSFSSSSSES IKELPDF
001: MEENLPPGFR FHPTDEELIT HYLCRKVSDI GFTGKAVVDV DLNKCEPWDL PAKASMGEKE WYFFSQRDRK YPTGLRTNRA TEAGYWKTTG KDKEIYRSGV
101: LVGMKKTLVF YKGRAPKGEK SNWVMHEYRL ESKQPFNPTN KEEWVVCRVF EKSTAAKKAQ EQQPQSSQPS FGSPCDANSS MANEFEDIDE LPNLNSNSST
201: IDYNNHIHQY SQRNVYSEDN TTSTAGLNMN MNMASTNLQS WTTSLLGPPL SPINSLLLKA FQIRNSYSFP KEMIPSFNHS SLQQGVSNMI QNASSSSQVQ
301: PQPQEEAFNM DSIW
101: LVGMKKTLVF YKGRAPKGEK SNWVMHEYRL ESKQPFNPTN KEEWVVCRVF EKSTAAKKAQ EQQPQSSQPS FGSPCDANSS MANEFEDIDE LPNLNSNSST
201: IDYNNHIHQY SQRNVYSEDN TTSTAGLNMN MNMASTNLQS WTTSLLGPPL SPINSLLLKA FQIRNSYSFP KEMIPSFNHS SLQQGVSNMI QNASSSSQVQ
301: PQPQEEAFNM DSIW
Arabidopsis Description
anac058NAC domain containing protein 58 [Source:UniProtKB/TrEMBL;Acc:Q9LS50]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.