Factsheet for Solyc08g006020.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P01770_001	Banana	cytosol, mitochondrion, nucleus	41.06	53.68
Solyc08g074300.2.1	Tomato	nucleus	60.26	53.37
CDX76817	Canola	nucleus	55.3	52.68
Bra007855.1-P	Field mustard	nucleus	54.97	52.37
Bra032095.1-P	Field mustard	nucleus	54.97	52.37
CDY20314	Canola	nucleus	54.97	52.37
CDY34773	Canola	nucleus	54.97	52.37
AT2G24430.1	Thale cress	nucleus	54.64	52.22
VIT_04s0008g02710.t01	Wine grape	nucleus	49.01	45.54
KRH61984	Soybean	nucleus	50.66	42.86
KRH52643	Soybean	cytoskeleton, cytosol, nucleus	50.33	42.82
GSMUA_Achr7P19680_001	Banana	cytosol, mitochondrion, nucleus	44.37	40.98
Solyc02g088180.2.1	Tomato	cytosol	43.05	40.75
Solyc12g036480.1.1	Tomato	nucleus	43.71	40.49
Os09t0497900-01	Rice	cytosol	47.02	40.34
GSMUA_Achr8P24680_001	Banana	cytosol	41.72	39.75
KRH16201	Soybean	cytoskeleton, cytosol, nucleus	48.34	39.14
HORVU5Hr1G074810.1	Barley	nucleus	46.36	38.57
TraesCS5D01G283200.1	Wheat	mitochondrion, nucleus, plastid	46.03	38.19
TraesCS5A01G275900.1	Wheat	nucleus	46.03	37.87
Solyc07g062840.2.1	Tomato	nucleus	44.04	37.78
Solyc03g115850.2.1	Tomato	nucleus	40.73	37.73
TraesCS5B01G275200.1	Wheat	nucleus	45.7	37.5
Solyc06g069710.2.1	Tomato	nucleus	42.05	37.46
Zm00001d020982_P001	Maize	cytosol, mitochondrion, nucleus	45.36	36.44
EER99125	Sorghum	nucleus	45.36	36.44
Zm00001d006053_P001	Maize	nucleus	45.36	35.31
PGSC0003DMT400038464	Potato	nucleus	85.1	33.68
Solyc09g025310.2.1	Tomato	nucleus	28.48	31.85
Solyc07g066330.2.1	Tomato	nucleus	35.76	31.58
Solyc06g008360.2.1	Tomato	nucleus	29.47	31.56
Solyc06g069100.1.1	Tomato	nucleus	43.38	26.36

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441
InterPro:IPR036093	UniProt:K4CI91	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR31744	PANTHER:PTHR31744:SF50	SUPFAM:SSF101941	EnsemblPlantsGene:Solyc08g006020.2	EnsemblPlants:Solyc08g006020.2.1	UniParc:UPI000276BC64
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr8:+:784730..788036

Molecular Weight (calculated)

34865.7 Da

IEP (calculated)

9.486

GRAVY (calculated)

-0.998

Length

302 amino acids

Sequence
(BLAST)

001: MEEVKEETQL PPGFRFHPTD EELITYYLVN KINDANFTGR AIADVDLNKS EPWDLPGKAK MGGKEWYFFS LRDRKYPTGV RTNRATNSGY WKTTGKDKEI
101: FNSKNNNNNN NLELIGMKKT LVFYKGRAPR GEKSNWVMHE YRIRSKSSYK TNKQDEWVVC RIFQKSVGLK KYPTSQYSRA TYSLNNTQNN ASIMSSQMMQ
201: LPNDHQGFQL AMGRNNNNNN NYMNNHGHEI QDVNNRVIFQ SGSSSMINNF PTQPQMSYNI TSYGGEMNNA NTSYGGEMNN ANTMNSGVMD HCVDLHNYWT
301: TY

Best Arabidopsis Sequence Match ( AT2G24430.1 )
(BLAST)

001: MEQGDHQQHK KEEEALPPGF RFHPTDEELI SYYLVNKIAD QNFTGKAIAD VDLNKSEPWE LPEKAKMGGK EWYFFSLRDR KYPTGVRTNR ATNTGYWKTT
101: GKDKEIFNST TSELVGMKKT LVFYRGRAPR GEKTCWVMHE YRLHSKSSYR TSKQDEWVVC RVFKKTEATK KYISTSSSST SHHHNNHTRA SILSTNNNNP
201: NYSSDLLQLP PHLQPHPSLN INQSLMANAV HLAELSRVFR ASTSTTMDSS HQQLMNYTHM PVSGLNLNLG GALVQPPPVV SLEDVAAVSA SYNGENGFGN
301: VEMSQCMDLD GYWPSY

Arabidopsis Description

ANAC038NAC domain containing protein 38 [Source:UniProtKB/TrEMBL;Acc:Q9ZQ25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.