Factsheet for GSMUA_Achr7P19680_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P01770_001	Banana	cytosol, mitochondrion, nucleus	55.66	78.79
GSMUA_Achr8P24680_001	Banana	cytosol	69.72	71.92
GSMUA_Achr9P00570_001	Banana	nucleus	28.13	54.76
GSMUA_Achr10P...	Banana	cytosol	34.56	49.56
GSMUA_Achr5P07600_001	Banana	cytosol	35.78	47.56
VIT_04s0008g02710.t01	Wine grape	nucleus	47.09	47.38
GSMUA_Achr8P18420_001	Banana	nucleus	41.28	46.88
Bra032095.1-P	Field mustard	nucleus	43.12	44.48
Solyc08g006020.2.1	Tomato	nucleus	40.98	44.37
AT2G24430.1	Thale cress	nucleus	42.81	44.3
CDY20314	Canola	nucleus	42.81	44.16
KRH52643	Soybean	cytoskeleton, cytosol, nucleus	47.71	43.94
KRH61984	Soybean	nucleus	47.71	43.7
CDX76817	Canola	nucleus	42.2	43.53
Os09t0497900-01	Rice	cytosol	46.79	43.47
CDY34773	Canola	nucleus	41.9	43.22
Bra007855.1-P	Field mustard	nucleus	41.59	42.9
GSMUA_Achr10P...	Banana	nucleus	42.2	42.07
Zm00001d020982_P001	Maize	cytosol, mitochondrion, nucleus	47.71	41.49
TraesCS5D01G283200.1	Wheat	mitochondrion, nucleus, plastid	46.18	41.48
GSMUA_Achr9P16920_001	Banana	cytosol	38.53	41.18
EER99125	Sorghum	nucleus	47.09	40.96
TraesCS5A01G275900.1	Wheat	nucleus	45.87	40.87
HORVU5Hr1G074810.1	Barley	nucleus	45.26	40.77
GSMUA_Achr3P18020_001	Banana	nucleus	36.39	40.61
TraesCS5B01G275200.1	Wheat	nucleus	45.57	40.49
KRH16201	Soybean	cytoskeleton, cytosol, nucleus	46.18	40.48
Solyc08g074300.2.1	Tomato	nucleus	41.59	39.88
GSMUA_Achr10P...	Banana	nucleus	40.06	39.46
Zm00001d006053_P001	Maize	nucleus	46.79	39.43
PGSC0003DMT400076103	Potato	nucleus	41.9	39.37
GSMUA_Achr7P18330_001	Banana	nucleus	36.39	38.64
GSMUA_Achr3P09520_001	Banana	cytosol	37.0	38.05
GSMUA_Achr10P...	Banana	cytosol	41.28	38.03
GSMUA_Achr6P30570_001	Banana	cytosol, nucleus, plastid	37.31	37.54
GSMUA_Achr9P10210_001	Banana	nucleus	27.52	37.34
GSMUA_Achr9P27530_001	Banana	nucleus	37.61	37.05
GSMUA_Achr6P08600_001	Banana	nucleus	38.23	36.02
GSMUA_Achr9P20090_001	Banana	cytosol	34.25	35.33
GSMUA_Achr11P...	Banana	nucleus	29.66	34.77
GSMUA_Achr11P...	Banana	nucleus	27.83	34.73
GSMUA_Achr3P23360_001	Banana	nucleus	29.66	34.64
GSMUA_Achr8P33310_001	Banana	nucleus	29.97	34.63
GSMUA_Achr5P00500_001	Banana	nucleus	28.75	34.31
GSMUA_Achr6P32290_001	Banana	nucleus	35.78	33.81
GSMUA_Achr5P18670_001	Banana	nucleus	28.13	33.7
GSMUA_Achr5P26640_001	Banana	nucleus	29.97	32.78
GSMUA_Achr7P11500_001	Banana	nucleus	33.64	32.35
GSMUA_Achr6P30050_001	Banana	nucleus	28.13	32.28
GSMUA_Achr8P18980_001	Banana	nucleus	26.91	32.23
GSMUA_Achr6P31350_001	Banana	nucleus	29.36	32.21
GSMUA_Achr9P26140_001	Banana	cytosol	30.89	32.06
GSMUA_AchrUn_...	Banana	nucleus	27.83	31.38
GSMUA_Achr11P...	Banana	nucleus	26.3	30.94
GSMUA_Achr8P07120_001	Banana	nucleus	28.44	30.9
GSMUA_AchrUn_...	Banana	nucleus	24.16	30.74
GSMUA_Achr1P10860_001	Banana	nucleus	27.22	30.58
GSMUA_Achr1P20530_001	Banana	cytosol, nucleus, plastid	25.69	30.32
GSMUA_Achr6P36550_001	Banana	nucleus	25.69	30.22
GSMUA_Achr8P21470_001	Banana	nucleus	39.14	24.81
PGSC0003DMT400038464	Potato	nucleus	41.28	17.69

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr7G19680_001
EnsemblPlants:GSMUA_Achr7P19680_001	EnsemblPlants:GSMUA_Achr7T19680_001	InterPro:IPR003441	InterPro:IPR036093	UniProt:M0TJ05	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31744	PANTHER:PTHR31744:SF50	SUPFAM:SSF101941
UniParc:UPI0002949E3A	:	:	:	:	:

Description

no apical meristem protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G19680_001]

Coordinates

chr7:+:22616833..22618520

Molecular Weight (calculated)

36394.3 Da

IEP (calculated)

8.307

GRAVY (calculated)

-0.491

Length

327 amino acids

Sequence
(BLAST)

001: MEGGAVKEEE QLPPGFRFHP TDEELITHYL TNKITEADFG ARAIADVDLN KCEPWDLPGK AKMGEKEWYF FSLRDRKYPT GVRTNRATNA GYWKTTGKDK
101: EIFNSDTSEL VGMKKTLVFY KGRAPRGEKT NWVMHEYRLH SKSALRGNKV TLSTMISNKE DEWVVCRVFM KSSGGKKCAT HQPRLNPYHV PMIPSLVQND
201: PFHFGAARSY LSNAELMELS RFSRGAHGFN LPIQPQFNLP GGAFTLAGLN LNLGAPTPPP LQTALRTMTV PLTQPLGVAE PPSSELANGV IGAMGEGFST
301: DVNSTIAGTR YHNVDSCMEL EGYWPAY

Best Arabidopsis Sequence Match ( AT2G24430.1 )
(BLAST)

001: MEQGDHQQHK KEEEALPPGF RFHPTDEELI SYYLVNKIAD QNFTGKAIAD VDLNKSEPWE LPEKAKMGGK EWYFFSLRDR KYPTGVRTNR ATNTGYWKTT
101: GKDKEIFNST TSELVGMKKT LVFYRGRAPR GEKTCWVMHE YRLHSKSSYR TSKQDEWVVC RVFKKTEATK KYISTSSSST SHHHNNHTRA SILSTNNNNP
201: NYSSDLLQLP PHLQPHPSLN INQSLMANAV HLAELSRVFR ASTSTTMDSS HQQLMNYTHM PVSGLNLNLG GALVQPPPVV SLEDVAAVSA SYNGENGFGN
301: VEMSQCMDLD GYWPSY

Arabidopsis Description

ANAC038NAC domain containing protein 38 [Source:UniProtKB/TrEMBL;Acc:Q9ZQ25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.